RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
SND1-201ENST00000354725 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
SND1-201ENST00000354725 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
SND1-201ENST00000354725 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
SND1-201ENST00000354725 ADGRL1O94910 1474 aa15.11■□□□□ 0.01
SND1-201ENST00000354725 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
SND1-201ENST00000354725 ADGBQ8N7X0 1667 aa15.1■□□□□ 0.01
SND1-201ENST00000354725 FGD6Q6ZV73 1430 aa15.1■□□□□ 0.01
SND1-201ENST00000354725 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
SND1-201ENST00000354725 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
SND1-201ENST00000354725 ABCA6Q8N139 1617 aa15.09■□□□□ 0.01
SND1-201ENST00000354725 ARHGEF40Q8TER5 1519 aa15.09■□□□□ 0.01
SND1-201ENST00000354725 HECW2Q9P2P5 1572 aa15.09■□□□□ 0.01
SND1-201ENST00000354725 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
SND1-201ENST00000354725 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
SND1-201ENST00000354725 ZFYVE16Q7Z3T8 1539 aa15.08■□□□□ 0
SND1-201ENST00000354725 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
SND1-201ENST00000354725 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
SND1-201ENST00000354725 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
SND1-201ENST00000354725 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
SND1-201ENST00000354725 MLH3Q9UHC1 1453 aa15.06■□□□□ 0
SND1-201ENST00000354725 PLXNC1O60486 1568 aa15.06■□□□□ 0
SND1-201ENST00000354725 DIP2CQ9Y2E4 1556 aa15.06■□□□□ 0
SND1-201ENST00000354725 ZNF518AQ6AHZ1 1483 aa15.06■□□□□ 0
SND1-201ENST00000354725 PTPRKQ15262 1439 aa15.06■□□□□ 0
SND1-201ENST00000354725 MAGI2Q86UL8 1455 aa15.05■□□□□ -0
SND1-201ENST00000354725 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
SND1-201ENST00000354725 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
SND1-201ENST00000354725 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
SND1-201ENST00000354725 EFCAB2Q5VUJ9 269 aa15.03■□□□□ -0
SND1-201ENST00000354725 ATP7AQ04656 1500 aa15.01□□□□□ -0.01
SND1-201ENST00000354725 CCDC141Q6ZP82 1450 aa15□□□□□ -0.01
SND1-201ENST00000354725 NAIPQ13075 1403 aa15□□□□□ -0.01
SND1-201ENST00000354725 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
SND1-201ENST00000354725 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
SND1-201ENST00000354725 ABCC5O15440 1437 aa15□□□□□ -0.01
SND1-201ENST00000354725 IL27Q8NEV9 243 aa15□□□□□ -0.01
SND1-201ENST00000354725 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
SND1-201ENST00000354725 ADGRL2O95490 1459 aa14.99□□□□□ -0.01
SND1-201ENST00000354725 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
SND1-201ENST00000354725 DAPK1P53355 1430 aa14.98□□□□□ -0.01
SND1-201ENST00000354725 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
SND1-201ENST00000354725 BCANQ96GW7 911 aa14.97□□□□□ -0.01
SND1-201ENST00000354725 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
SND1-201ENST00000354725 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
SND1-201ENST00000354725 CCER2I3L3R5 266 aa14.96□□□□□ -0.02
SND1-201ENST00000354725 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.02
SND1-201ENST00000354725 AGLP35573 1532 aa14.95□□□□□ -0.02
SND1-201ENST00000354725 EIF2AK4Q9P2K8 1649 aaKnown RBP14.95□□□□□ -0.02
SND1-201ENST00000354725 DEPDC5O75140 1603 aa14.94□□□□□ -0.02
SND1-201ENST00000354725 ADAMTSL3P82987 1691 aa14.94□□□□□ -0.02
SND1-201ENST00000354725 RNF17Q9BXT8 1623 aaKnown RBP14.93□□□□□ -0.02
SND1-201ENST00000354725 MROH1Q8NDA8 1641 aa14.93□□□□□ -0.02
SND1-201ENST00000354725 HNRNPMP52272 730 aaKnown RBP eCLIP14.93□□□□□ -0.028e-7■■■■□ 23.4
SND1-201ENST00000354725 ITGAEP38570 1179 aa14.92□□□□□ -0.02
SND1-201ENST00000354725 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
SND1-201ENST00000354725 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
SND1-201ENST00000354725 ATP10AO60312 1499 aa14.91□□□□□ -0.02
SND1-201ENST00000354725 C9orf84Q5VXU9 1444 aa14.9□□□□□ -0.02
SND1-201ENST00000354725 RSPH4AQ5TD94 716 aa14.89□□□□□ -0.03
SND1-201ENST00000354725 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
SND1-201ENST00000354725 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
SND1-201ENST00000354725 ZMYND15Q9H091 742 aa14.87□□□□□ -0.03
SND1-201ENST00000354725 NCOA1Q15788 1441 aa14.87□□□□□ -0.03
SND1-201ENST00000354725 ROCK1Q13464 1354 aa14.86□□□□□ -0.03
SND1-201ENST00000354725 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
SND1-201ENST00000354725 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
SND1-201ENST00000354725 UNC13BO14795 1591 aa14.85□□□□□ -0.03
SND1-201ENST00000354725 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
SND1-201ENST00000354725 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
SND1-201ENST00000354725 A2MP01023 1474 aa14.84□□□□□ -0.03
SND1-201ENST00000354725 AAMPQ13685 434 aa14.84□□□□□ -0.03
SND1-201ENST00000354725 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
SND1-201ENST00000354725 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.03
SND1-201ENST00000354725 PRDM15P57071 1507 aaPredicted RBP14.83□□□□□ -0.04
SND1-201ENST00000354725 GLIPR1L2Q4G1C9 344 aa14.82□□□□□ -0.04
SND1-201ENST00000354725 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
SND1-201ENST00000354725 FER1L4A9Z1Z3 1794 aa14.82□□□□□ -0.04
SND1-201ENST00000354725 ERBINQ96RT1 1412 aa14.82□□□□□ -0.04
SND1-201ENST00000354725 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
SND1-201ENST00000354725 SPAG9O60271 1321 aaKnown RBP14.81□□□□□ -0.04
SND1-201ENST00000354725 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
SND1-201ENST00000354725 DHX29Q7Z478 1369 aaKnown RBP14.81□□□□□ -0.04
SND1-201ENST00000354725 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
SND1-201ENST00000354725 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
SND1-201ENST00000354725 FKBP8Q14318 412 aa14.78□□□□□ -0.04
SND1-201ENST00000354725 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
SND1-201ENST00000354725 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
SND1-201ENST00000354725 C3P01024 1663 aa14.77□□□□□ -0.05
SND1-201ENST00000354725 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
SND1-201ENST00000354725 CEP152O94986 1710 aa14.76□□□□□ -0.05
SND1-201ENST00000354725 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
SND1-201ENST00000354725 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
SND1-201ENST00000354725 KIF15Q9NS87 1388 aa14.75□□□□□ -0.05
SND1-201ENST00000354725 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
SND1-201ENST00000354725 SPATA31E1Q6ZUB1 1445 aa14.74□□□□□ -0.05
SND1-201ENST00000354725 CAMSAP1Q5T5Y3 1602 aa14.74□□□□□ -0.05
SND1-201ENST00000354725 RPRD2Q5VT52 1461 aaKnown RBP14.74□□□□□ -0.05
SND1-201ENST00000354725 NBR1Q14596 966 aa14.74□□□□□ -0.05
SND1-201ENST00000354725 ANKRD30AQ9BXX3 1397 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms