RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 MAGI2Q86UL8 1455 aa29.72■■■□□ 2.35
TRIM4-202ENST00000354241 TONSLQ96HA7 1378 aa29.72■■■□□ 2.35
TRIM4-202ENST00000354241 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
TRIM4-202ENST00000354241 EIF2AK4Q9P2K8 1649 aaKnown RBP29.7■■■□□ 2.34
TRIM4-202ENST00000354241 ABCA6Q8N139 1617 aa29.68■■■□□ 2.34
TRIM4-202ENST00000354241 FRMPD1Q5SYB0 1578 aa29.68■■■□□ 2.34
TRIM4-202ENST00000354241 DEPDC5O75140 1603 aa29.67■■■□□ 2.34
TRIM4-202ENST00000354241 A2MP01023 1474 aa29.67■■■□□ 2.34
TRIM4-202ENST00000354241 KIF3BO15066 747 aa29.63■■■□□ 2.33
TRIM4-202ENST00000354241 RPRD2Q5VT52 1461 aaKnown RBP29.62■■■□□ 2.33
TRIM4-202ENST00000354241 DIP2CQ9Y2E4 1556 aa29.61■■■□□ 2.33
TRIM4-202ENST00000354241 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
TRIM4-202ENST00000354241 ZMYM4Q5VZL5 1548 aa29.59■■■□□ 2.33
TRIM4-202ENST00000354241 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
TRIM4-202ENST00000354241 KANK1Q14678 1352 aa29.56■■■□□ 2.32
TRIM4-202ENST00000354241 MROH1Q8NDA8 1641 aa29.55■■■□□ 2.32
TRIM4-202ENST00000354241 PRDM15P57071 1507 aaPredicted RBP29.55■■■□□ 2.32
TRIM4-202ENST00000354241 YEATS2Q9ULM3 1422 aa29.55■■■□□ 2.32
TRIM4-202ENST00000354241 RNF17Q9BXT8 1623 aaKnown RBP29.53■■■□□ 2.32
TRIM4-202ENST00000354241 VWDEQ8N2E2 1590 aa29.52■■■□□ 2.32
TRIM4-202ENST00000354241 ZNF316A6NFI3 1004 aaPredicted RBP29.51■■■□□ 2.32
TRIM4-202ENST00000354241 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.31
TRIM4-202ENST00000354241 TET3O43151 1660 aa29.5■■■□□ 2.31
TRIM4-202ENST00000354241 E9PCH4 1651 aa29.49■■■□□ 2.31
TRIM4-202ENST00000354241 L3MBTL2Q969R5 705 aa29.47■■■□□ 2.31
TRIM4-202ENST00000354241 COL17A1Q9UMD9 1497 aaPredicted RBP29.46■■■□□ 2.31
TRIM4-202ENST00000354241 CEP152O94986 1710 aa29.44■■■□□ 2.3
TRIM4-202ENST00000354241 TRHP20396 242 aaPredicted RBP29.43■■■□□ 2.3
TRIM4-202ENST00000354241 PLA2R1Q13018 1463 aa29.43■■■□□ 2.3
TRIM4-202ENST00000354241 GGT6Q6P531 493 aa29.43■■■□□ 2.3
TRIM4-202ENST00000354241 CCDC144AA2RUR9 1427 aa29.42■■■□□ 2.3
TRIM4-202ENST00000354241 ATP10AO60312 1499 aa29.41■■■□□ 2.3
TRIM4-202ENST00000354241 SPHKAPQ2M3C7 1700 aa29.38■■■□□ 2.29
TRIM4-202ENST00000354241 LMTK2Q8IWU2 1503 aa29.38■■■□□ 2.29
TRIM4-202ENST00000354241 EFCAB6Q5THR3 1501 aa29.37■■■□□ 2.29
TRIM4-202ENST00000354241 REREQ9P2R6 1566 aa29.34■■■□□ 2.29
TRIM4-202ENST00000354241 ARHGEF40Q8TER5 1519 aa29.34■■■□□ 2.29
TRIM4-202ENST00000354241 TRPM2O94759 1503 aa29.32■■■□□ 2.28
TRIM4-202ENST00000354241 ABCC3O15438 1527 aa29.32■■■□□ 2.28
TRIM4-202ENST00000354241 WASHC2CQ9Y4E1 1318 aa29.31■■■□□ 2.28
TRIM4-202ENST00000354241 PTPRTO14522 1441 aa29.3■■■□□ 2.28
TRIM4-202ENST00000354241 CAMSAP1Q5T5Y3 1602 aa29.27■■■□□ 2.28
TRIM4-202ENST00000354241 ZC3H13Q5T200 1668 aaKnown RBP29.27■■■□□ 2.28
TRIM4-202ENST00000354241 AGLP35573 1532 aa29.26■■■□□ 2.27
TRIM4-202ENST00000354241 SIGLEC1Q9BZZ2 1709 aa29.25■■■□□ 2.27
TRIM4-202ENST00000354241 NBPF8Q3BBV2 869 aa29.25■■■□□ 2.27
TRIM4-202ENST00000354241 CLTCL1P53675 1640 aa29.25■■■□□ 2.27
TRIM4-202ENST00000354241 CFAP65Q6ZU64 1925 aaKnown RBP29.23■■■□□ 2.27
TRIM4-202ENST00000354241 NPATQ14207 1427 aa29.22■■■□□ 2.27
TRIM4-202ENST00000354241 RGL3Q3MIN7 710 aa29.21■■■□□ 2.27
TRIM4-202ENST00000354241 ZNF326Q5BKZ1 582 aaKnown RBP29.2■■■□□ 2.26
TRIM4-202ENST00000354241 DCAF11Q8TEB1 546 aa29.2■■■□□ 2.26
TRIM4-202ENST00000354241 DIEXFQ68CQ4 756 aaKnown RBP29.18■■■□□ 2.26
TRIM4-202ENST00000354241 KDM2AQ9Y2K7 1162 aa29.18■■■□□ 2.26
TRIM4-202ENST00000354241 UGGT1Q9NYU2 1555 aa29.16■■■□□ 2.26
TRIM4-202ENST00000354241 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
TRIM4-202ENST00000354241 SPATA31E1Q6ZUB1 1445 aa29.14■■■□□ 2.26
TRIM4-202ENST00000354241 KIF1BO60333 1816 aa29.13■■■□□ 2.25
TRIM4-202ENST00000354241 HIRIP3Q9BW71 556 aaPredicted RBP29.12■■■□□ 2.25
TRIM4-202ENST00000354241 ARHGAP31Q2M1Z3 1444 aa29.12■■■□□ 2.25
TRIM4-202ENST00000354241 MLECQ14165 292 aa29.11■■■□□ 2.25
TRIM4-202ENST00000354241 CNTLNQ9NXG0 1405 aa29.1■■■□□ 2.25
TRIM4-202ENST00000354241 CLTCQ00610 1675 aaKnown RBP29.09■■■□□ 2.25
TRIM4-202ENST00000354241 PPP6R1Q9UPN7 881 aa29.08■■■□□ 2.25
TRIM4-202ENST00000354241 NOS1P29475 1434 aa29.06■■■□□ 2.24
TRIM4-202ENST00000354241 ARID4BQ4LE39 1312 aaPredicted RBP29.06■■■□□ 2.24
TRIM4-202ENST00000354241 RALGAPBQ86X10 1494 aa29.06■■■□□ 2.24
TRIM4-202ENST00000354241 EIF4G2P78344 907 aaKnown RBP eCLIP29.05■■■□□ 2.24
TRIM4-202ENST00000354241 NEURL4Q96JN8 1562 aa29.05■■■□□ 2.24
TRIM4-202ENST00000354241 PRAG1Q86YV5 1406 aa29.04■■■□□ 2.24
TRIM4-202ENST00000354241 PREX1Q8TCU6 1659 aa29.04■■■□□ 2.24
TRIM4-202ENST00000354241 HSPA5P11021 654 aaKnown RBP29.04■■■□□ 2.24
TRIM4-202ENST00000354241 MROH2AA6NES4 1674 aa29.04■■■□□ 2.24
TRIM4-202ENST00000354241 SYNMO15061 1565 aa29.03■■■□□ 2.24
TRIM4-202ENST00000354241 TRPM1Q7Z4N2 1603 aa29.01■■■□□ 2.23
TRIM4-202ENST00000354241 PIK3C2BO00750 1634 aa28.99■■■□□ 2.23
TRIM4-202ENST00000354241 ADGRB3O60242 1522 aa28.98■■■□□ 2.23
TRIM4-202ENST00000354241 CHGAP10645 457 aaKnown RBP28.98■■■□□ 2.23
TRIM4-202ENST00000354241 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
TRIM4-202ENST00000354241 MADDQ8WXG6 1647 aa28.94■■■□□ 2.22
TRIM4-202ENST00000354241 ROCK2O75116 1388 aaKnown RBP28.94■■■□□ 2.22
TRIM4-202ENST00000354241 CARD11Q9BXL7 1154 aa28.94■■■□□ 2.22
TRIM4-202ENST00000354241 IFT172Q9UG01 1749 aa28.94■■■□□ 2.22
TRIM4-202ENST00000354241 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
TRIM4-202ENST00000354241 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
TRIM4-202ENST00000354241 STAC3Q96MF2 364 aa28.92■■■□□ 2.22
TRIM4-202ENST00000354241 USP47Q96K76 1375 aa28.92■■■□□ 2.22
TRIM4-202ENST00000354241 SLC52A1Q9NWF4 448 aa28.88■■■□□ 2.21
TRIM4-202ENST00000354241 MYOM2P54296 1465 aa28.87■■■□□ 2.21
TRIM4-202ENST00000354241 IDI1Q13907 227 aa28.87■■■□□ 2.21
TRIM4-202ENST00000354241 PPLO60437 1756 aa28.86■■■□□ 2.21
TRIM4-202ENST00000354241 SPATA31D1Q6ZQQ2 1576 aa28.86■■■□□ 2.21
TRIM4-202ENST00000354241 ZMYM3Q14202 1370 aa28.85■■■□□ 2.21
TRIM4-202ENST00000354241 NBPF1Q3BBV0 1214 aa28.85■■■□□ 2.21
TRIM4-202ENST00000354241 LAMC1P11047 1609 aa28.84■■■□□ 2.21
TRIM4-202ENST00000354241 MYO5BQ9ULV0 1848 aa28.83■■■□□ 2.21
TRIM4-202ENST00000354241 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
TRIM4-202ENST00000354241 GPRASP1Q5JY77 1395 aa28.82■■■□□ 2.2
TRIM4-202ENST00000354241 ADGRF5Q8IZF2 1346 aa28.8■■■□□ 2.2
TRIM4-202ENST00000354241 TMEM131LA2VDJ0 1609 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms