RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.322e-8■■■□□ 14.9
SAMM50-201ENST00000350028 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
SAMM50-201ENST00000350028 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
SAMM50-201ENST00000350028 CNTLNQ9NXG0 1405 aa23.29■■□□□ 1.32
SAMM50-201ENST00000350028 ZFYVE16Q7Z3T8 1539 aa23.29■■□□□ 1.32
SAMM50-201ENST00000350028 GLI2P10070 1586 aa23.28■■□□□ 1.32
SAMM50-201ENST00000350028 AFAP1Q8N556 730 aa23.28■■□□□ 1.32
SAMM50-201ENST00000350028 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
SAMM50-201ENST00000350028 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
SAMM50-201ENST00000350028 ATP10AO60312 1499 aa23.26■■□□□ 1.31
SAMM50-201ENST00000350028 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
SAMM50-201ENST00000350028 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
SAMM50-201ENST00000350028 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
SAMM50-201ENST00000350028 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
SAMM50-201ENST00000350028 USP47Q96K76 1375 aa23.24■■□□□ 1.31
SAMM50-201ENST00000350028 KDM5CP41229 1560 aa23.24■■□□□ 1.31
SAMM50-201ENST00000350028 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
SAMM50-201ENST00000350028 ATP7AQ04656 1500 aa23.23■■□□□ 1.31
SAMM50-201ENST00000350028 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
SAMM50-201ENST00000350028 SCAPERQ9BY12 1400 aa23.23■■□□□ 1.31
SAMM50-201ENST00000350028 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
SAMM50-201ENST00000350028 DCAF11Q8TEB1 546 aa23.22■■□□□ 1.31
SAMM50-201ENST00000350028 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
SAMM50-201ENST00000350028 KDM2AQ9Y2K7 1162 aa23.2■■□□□ 1.3
SAMM50-201ENST00000350028 ARID4BQ4LE39 1312 aaPredicted RBP23.2■■□□□ 1.3
SAMM50-201ENST00000350028 DEPDC5O75140 1603 aa23.19■■□□□ 1.3
SAMM50-201ENST00000350028 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
SAMM50-201ENST00000350028 PPRC1Q5VV67 1664 aaKnown RBP23.17■■□□□ 1.3
SAMM50-201ENST00000350028 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
SAMM50-201ENST00000350028 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
SAMM50-201ENST00000350028 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
SAMM50-201ENST00000350028 PRAG1Q86YV5 1406 aa23.15■■□□□ 1.3
SAMM50-201ENST00000350028 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
SAMM50-201ENST00000350028 TSPOAP1O95153 1857 aa23.14■■□□□ 1.29
SAMM50-201ENST00000350028 A2MP01023 1474 aa23.13■■□□□ 1.29
SAMM50-201ENST00000350028 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
SAMM50-201ENST00000350028 KANK1Q14678 1352 aa23.12■■□□□ 1.29
SAMM50-201ENST00000350028 E9PCH4 1651 aa23.12■■□□□ 1.29
SAMM50-201ENST00000350028 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
SAMM50-201ENST00000350028 TET3O43151 1660 aa23.11■■□□□ 1.29
SAMM50-201ENST00000350028 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
SAMM50-201ENST00000350028 VWDEQ8N2E2 1590 aa23.11■■□□□ 1.29
SAMM50-201ENST00000350028 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
SAMM50-201ENST00000350028 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
SAMM50-201ENST00000350028 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.29
SAMM50-201ENST00000350028 KIDINS220Q9ULH0 1771 aa23.08■■□□□ 1.29
SAMM50-201ENST00000350028 TRPM2O94759 1503 aa23.07■■□□□ 1.28
SAMM50-201ENST00000350028 PTPRTO14522 1441 aa23.07■■□□□ 1.28
SAMM50-201ENST00000350028 LAMC1P11047 1609 aa23.07■■□□□ 1.28
SAMM50-201ENST00000350028 GPRASP1Q5JY77 1395 aa23.06■■□□□ 1.28
SAMM50-201ENST00000350028 KIF3BO15066 747 aa23.06■■□□□ 1.28
SAMM50-201ENST00000350028 SPHKAPQ2M3C7 1700 aa23.06■■□□□ 1.28
SAMM50-201ENST00000350028 PRDM15P57071 1507 aaPredicted RBP23.06■■□□□ 1.28
SAMM50-201ENST00000350028 NEO1Q92859 1461 aa23.05■■□□□ 1.28
SAMM50-201ENST00000350028 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
SAMM50-201ENST00000350028 POGZQ7Z3K3 1410 aa23.03■■□□□ 1.28
SAMM50-201ENST00000350028 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
SAMM50-201ENST00000350028 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
SAMM50-201ENST00000350028 CEP152O94986 1710 aa23.02■■□□□ 1.28
SAMM50-201ENST00000350028 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
SAMM50-201ENST00000350028 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
SAMM50-201ENST00000350028 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
SAMM50-201ENST00000350028 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
SAMM50-201ENST00000350028 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
SAMM50-201ENST00000350028 NBPF1Q3BBV0 1214 aa22.96■■□□□ 1.27
SAMM50-201ENST00000350028 NEURL4Q96JN8 1562 aa22.96■■□□□ 1.27
SAMM50-201ENST00000350028 HECW2Q9P2P5 1572 aa22.96■■□□□ 1.27
SAMM50-201ENST00000350028 LMTK2Q8IWU2 1503 aa22.96■■□□□ 1.27
SAMM50-201ENST00000350028 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
SAMM50-201ENST00000350028 RICTORQ6R327 1708 aa22.93■■□□□ 1.26
SAMM50-201ENST00000350028 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
SAMM50-201ENST00000350028 FRMPD1Q5SYB0 1578 aa22.93■■□□□ 1.26
SAMM50-201ENST00000350028 RAPGEF3O95398 923 aa22.93■■□□□ 1.26
SAMM50-201ENST00000350028 MADDQ8WXG6 1647 aa22.91■■□□□ 1.26
SAMM50-201ENST00000350028 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
SAMM50-201ENST00000350028 CCDC184Q52MB2 194 aa22.91■■□□□ 1.26
SAMM50-201ENST00000350028 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.26
SAMM50-201ENST00000350028 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
SAMM50-201ENST00000350028 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
SAMM50-201ENST00000350028 KTN1Q86UP2 1357 aaKnown RBP22.85■■□□□ 1.25
SAMM50-201ENST00000350028 KIF1BO60333 1816 aa22.85■■□□□ 1.25
SAMM50-201ENST00000350028 TESK2Q96S53 571 aa22.84■■□□□ 1.25
SAMM50-201ENST00000350028 KIAA1210Q9ULL0 1709 aa22.83■■□□□ 1.25
SAMM50-201ENST00000350028 IQGAP1P46940 1657 aa22.82■■□□□ 1.24
SAMM50-201ENST00000350028 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
SAMM50-201ENST00000350028 MYOM2P54296 1465 aa22.8■■□□□ 1.24
SAMM50-201ENST00000350028 TMF1P82094 1093 aa22.8■■□□□ 1.24
SAMM50-201ENST00000350028 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
SAMM50-201ENST00000350028 DIP2CQ9Y2E4 1556 aa22.79■■□□□ 1.24
SAMM50-201ENST00000350028 RALBP1Q15311 655 aa22.79■■□□□ 1.24
SAMM50-201ENST00000350028 GGT6Q6P531 493 aa22.78■■□□□ 1.24
SAMM50-201ENST00000350028 SCAF11Q99590 1463 aaKnown RBP22.78■■□□□ 1.24
SAMM50-201ENST00000350028 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
SAMM50-201ENST00000350028 YEATS2Q9ULM3 1422 aa22.77■■□□□ 1.24
SAMM50-201ENST00000350028 DISP3Q9P2K9 1392 aa22.77■■□□□ 1.24
SAMM50-201ENST00000350028 ABCC3O15438 1527 aa22.76■■□□□ 1.23
SAMM50-201ENST00000350028 IFT172Q9UG01 1749 aa22.76■■□□□ 1.23
SAMM50-201ENST00000350028 NPATQ14207 1427 aa22.76■■□□□ 1.23
SAMM50-201ENST00000350028 NEFLP07196 543 aa22.74■■□□□ 1.23
SAMM50-201ENST00000350028 WASHC2CQ9Y4E1 1318 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms