RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
CHRNA3-202ENST00000348639 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
CHRNA3-202ENST00000348639 RALGAPBQ86X10 1494 aa28.42■■■□□ 2.14
CHRNA3-202ENST00000348639 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
CHRNA3-202ENST00000348639 ADGRL1O94910 1474 aa28.4■■■□□ 2.14
CHRNA3-202ENST00000348639 PLA2R1Q13018 1463 aa28.4■■■□□ 2.14
CHRNA3-202ENST00000348639 MYT1LQ9UL68 1186 aa28.4■■■□□ 2.14
CHRNA3-202ENST00000348639 POLR1AO95602 1720 aaPredicted RBP28.39■■■□□ 2.14
CHRNA3-202ENST00000348639 SCAPERQ9BY12 1400 aa28.39■■■□□ 2.13
CHRNA3-202ENST00000348639 USP47Q96K76 1375 aa28.38■■■□□ 2.13
CHRNA3-202ENST00000348639 ATP10AO60312 1499 aa28.37■■■□□ 2.13
CHRNA3-202ENST00000348639 KIF7Q2M1P5 1343 aa28.35■■■□□ 2.13
CHRNA3-202ENST00000348639 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
CHRNA3-202ENST00000348639 KDM5CP41229 1560 aa28.35■■■□□ 2.13
CHRNA3-202ENST00000348639 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
CHRNA3-202ENST00000348639 INO80Q9ULG1 1556 aaPredicted RBP28.34■■■□□ 2.13
CHRNA3-202ENST00000348639 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
CHRNA3-202ENST00000348639 CYB5RLQ6IPT4 315 aa28.31■■■□□ 2.12
CHRNA3-202ENST00000348639 CD109Q6YHK3 1445 aa28.3■■■□□ 2.12
CHRNA3-202ENST00000348639 CARD11Q9BXL7 1154 aa28.28■■■□□ 2.12
CHRNA3-202ENST00000348639 DEPDC5O75140 1603 aa28.27■■■□□ 2.12
CHRNA3-202ENST00000348639 ARID4BQ4LE39 1312 aaPredicted RBP28.26■■■□□ 2.12
CHRNA3-202ENST00000348639 RGL3Q3MIN7 710 aa28.26■■■□□ 2.11
CHRNA3-202ENST00000348639 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
CHRNA3-202ENST00000348639 BCORL1Q5H9F3 1711 aa28.25■■■□□ 2.11
CHRNA3-202ENST00000348639 A2MP01023 1474 aa28.23■■■□□ 2.11
CHRNA3-202ENST00000348639 KIF3BO15066 747 aa28.21■■■□□ 2.11
CHRNA3-202ENST00000348639 DHX29Q7Z478 1369 aaKnown RBP28.21■■■□□ 2.11
CHRNA3-202ENST00000348639 ZNF518AQ6AHZ1 1483 aa28.2■■■□□ 2.11
CHRNA3-202ENST00000348639 ROCK2O75116 1388 aaKnown RBP28.2■■■□□ 2.1
CHRNA3-202ENST00000348639 E9PCH4 1651 aa28.2■■■□□ 2.1
CHRNA3-202ENST00000348639 TRPM1Q7Z4N2 1603 aa28.19■■■□□ 2.1
CHRNA3-202ENST00000348639 EIF2AK4Q9P2K8 1649 aaKnown RBP28.19■■■□□ 2.1
CHRNA3-202ENST00000348639 PRKRIP1Q9H875 184 aaPredicted RBP28.18■■■□□ 2.1
CHRNA3-202ENST00000348639 CFAP74Q9C0B2 1584 aa28.18■■■□□ 2.1
CHRNA3-202ENST00000348639 VWDEQ8N2E2 1590 aa28.18■■■□□ 2.1
CHRNA3-202ENST00000348639 KANK1Q14678 1352 aa28.16■■■□□ 2.1
CHRNA3-202ENST00000348639 TET3O43151 1660 aa28.15■■■□□ 2.1
CHRNA3-202ENST00000348639 KIDINS220Q9ULH0 1771 aa28.15■■■□□ 2.1
CHRNA3-202ENST00000348639 PTPRTO14522 1441 aa28.15■■■□□ 2.1
CHRNA3-202ENST00000348639 TRPM2O94759 1503 aa28.14■■■□□ 2.1
CHRNA3-202ENST00000348639 GPRASP1Q5JY77 1395 aa28.14■■■□□ 2.09
CHRNA3-202ENST00000348639 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
CHRNA3-202ENST00000348639 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
CHRNA3-202ENST00000348639 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
CHRNA3-202ENST00000348639 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
CHRNA3-202ENST00000348639 LAMC1P11047 1609 aa28.09■■■□□ 2.09
CHRNA3-202ENST00000348639 MROH1Q8NDA8 1641 aa28.09■■■□□ 2.09
CHRNA3-202ENST00000348639 POLR3GLQ9BT43 218 aa28.09■■■□□ 2.09
CHRNA3-202ENST00000348639 NBPF1Q3BBV0 1214 aa28.06■■■□□ 2.08
CHRNA3-202ENST00000348639 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
CHRNA3-202ENST00000348639 MLH3Q9UHC1 1453 aa28.05■■■□□ 2.08
CHRNA3-202ENST00000348639 CEP152O94986 1710 aa28.03■■■□□ 2.08
CHRNA3-202ENST00000348639 NEO1Q92859 1461 aa28.03■■■□□ 2.08
CHRNA3-202ENST00000348639 RAPGEF3O95398 923 aa28.02■■■□□ 2.08
CHRNA3-202ENST00000348639 CLTCL1P53675 1640 aa28.02■■■□□ 2.08
CHRNA3-202ENST00000348639 STAC3Q96MF2 364 aa28.02■■■□□ 2.08
CHRNA3-202ENST00000348639 HECW2Q9P2P5 1572 aa28.01■■■□□ 2.07
CHRNA3-202ENST00000348639 CCDC184Q52MB2 194 aa28.01■■■□□ 2.07
CHRNA3-202ENST00000348639 RNF17Q9BXT8 1623 aaKnown RBP27.98■■■□□ 2.07
CHRNA3-202ENST00000348639 LMTK2Q8IWU2 1503 aa27.98■■■□□ 2.07
CHRNA3-202ENST00000348639 SUPT16HQ9Y5B9 1047 aaKnown RBP27.97■■■□□ 2.07
CHRNA3-202ENST00000348639 EFCAB6Q5THR3 1501 aa27.97■■■□□ 2.07
CHRNA3-202ENST00000348639 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
CHRNA3-202ENST00000348639 NEURL4Q96JN8 1562 aa27.97■■■□□ 2.07
CHRNA3-202ENST00000348639 MAP3K4Q9Y6R4 1608 aa27.96■■■□□ 2.07
CHRNA3-202ENST00000348639 HNRNPUQ00839 825 aaKnown RBP eCLIP27.95■■■□□ 2.06
CHRNA3-202ENST00000348639 MADDQ8WXG6 1647 aa27.95■■■□□ 2.06
CHRNA3-202ENST00000348639 FRMPD1Q5SYB0 1578 aa27.94■■■□□ 2.06
CHRNA3-202ENST00000348639 GGT6Q6P531 493 aa27.94■■■□□ 2.06
CHRNA3-202ENST00000348639 ABCA6Q8N139 1617 aa27.93■■■□□ 2.06
CHRNA3-202ENST00000348639 PPRC1Q5VV67 1664 aaKnown RBP27.91■■■□□ 2.06
CHRNA3-202ENST00000348639 FAM69CQ0P6D2 419 aa27.91■■■□□ 2.06
CHRNA3-202ENST00000348639 TESK2Q96S53 571 aa27.9■■■□□ 2.06
CHRNA3-202ENST00000348639 COL17A1Q9UMD9 1497 aaPredicted RBP27.89■■■□□ 2.05
CHRNA3-202ENST00000348639 GLI2P10070 1586 aa27.88■■■□□ 2.05
CHRNA3-202ENST00000348639 CNGB1Q14028 1251 aaPredicted RBP27.86■■■□□ 2.05
CHRNA3-202ENST00000348639 UGGT1Q9NYU2 1555 aa27.86■■■□□ 2.05
CHRNA3-202ENST00000348639 FAM9BQ8IZU0 186 aa27.85■■■□□ 2.05
CHRNA3-202ENST00000348639 RICTORQ6R327 1708 aa27.84■■■□□ 2.05
CHRNA3-202ENST00000348639 KTN1Q86UP2 1357 aaKnown RBP27.84■■■□□ 2.05
CHRNA3-202ENST00000348639 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
CHRNA3-202ENST00000348639 DIP2CQ9Y2E4 1556 aa27.81■■■□□ 2.04
CHRNA3-202ENST00000348639 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
CHRNA3-202ENST00000348639 KIF1BO60333 1816 aa27.81■■■□□ 2.04
CHRNA3-202ENST00000348639 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
CHRNA3-202ENST00000348639 TMF1P82094 1093 aa27.8■■■□□ 2.04
CHRNA3-202ENST00000348639 DIP2BQ9P265 1576 aa27.8■■■□□ 2.04
CHRNA3-202ENST00000348639 MYOM2P54296 1465 aa27.8■■■□□ 2.04
CHRNA3-202ENST00000348639 KIAA1210Q9ULL0 1709 aa27.79■■■□□ 2.04
CHRNA3-202ENST00000348639 NPATQ14207 1427 aa27.78■■■□□ 2.04
CHRNA3-202ENST00000348639 SCAF11Q99590 1463 aaKnown RBP27.77■■■□□ 2.04
CHRNA3-202ENST00000348639 RALBP1Q15311 655 aa27.77■■■□□ 2.04
CHRNA3-202ENST00000348639 YEATS2Q9ULM3 1422 aa27.77■■■□□ 2.04
CHRNA3-202ENST00000348639 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
CHRNA3-202ENST00000348639 ABCC3O15438 1527 aa27.76■■■□□ 2.03
CHRNA3-202ENST00000348639 TSPOAP1O95153 1857 aa27.76■■■□□ 2.03
CHRNA3-202ENST00000348639 ZBED9Q6R2W3 1325 aa27.74■■■□□ 2.03
CHRNA3-202ENST00000348639 CHGAP10645 457 aaKnown RBP27.74■■■□□ 2.03
CHRNA3-202ENST00000348639 PER1O15534 1290 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms