RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-202ENST00000348513 HSCBQ8IWL3 235 aa13.84□□□□□ -0.19
SMARCE1-202ENST00000348513 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
SMARCE1-202ENST00000348513 BRD2P25440 801 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-202ENST00000348513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCE1-202ENST00000348513 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-202ENST00000348513 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-202ENST00000348513 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
SMARCE1-202ENST00000348513 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
SMARCE1-202ENST00000348513 GOLGA6L4A6NEF3 574 aa13.81□□□□□ -0.2
SMARCE1-202ENST00000348513 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
SMARCE1-202ENST00000348513 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-202ENST00000348513 NRDCO43847 1150 aa13.81□□□□□ -0.2
SMARCE1-202ENST00000348513 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-202ENST00000348513 TEX35Q5T0J7 233 aa13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 MCCP23508 829 aa13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 CLSTN1O94985 981 aa13.8□□□□□ -0.2
SMARCE1-202ENST00000348513 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 EID1Q9Y6B2 187 aa13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 IPO8O15397 1037 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
SMARCE1-202ENST00000348513 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.2
SMARCE1-202ENST00000348513 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
SMARCE1-202ENST00000348513 RALBP1Q15311 655 aa13.77□□□□□ -0.21
SMARCE1-202ENST00000348513 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
SMARCE1-202ENST00000348513 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.21
SMARCE1-202ENST00000348513 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
SMARCE1-202ENST00000348513 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-202ENST00000348513 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-202ENST00000348513 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
SMARCE1-202ENST00000348513 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
SMARCE1-202ENST00000348513 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 AMPHP49418 695 aa13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-202ENST00000348513 STK31Q9BXU1 1019 aa13.74□□□□□ -0.21
SMARCE1-202ENST00000348513 R3HCC1Q9Y3T6 440 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-202ENST00000348513 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-202ENST00000348513 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
SMARCE1-202ENST00000348513 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-202ENST00000348513 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
SMARCE1-202ENST00000348513 GORABQ5T7V8 394 aa13.72□□□□□ -0.21
SMARCE1-202ENST00000348513 WWC1Q8IX03 1113 aa13.72□□□□□ -0.21
SMARCE1-202ENST00000348513 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-202ENST00000348513 GPS2Q13227 327 aa13.71□□□□□ -0.21
SMARCE1-202ENST00000348513 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-202ENST00000348513 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
SMARCE1-202ENST00000348513 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-202ENST00000348513 ZHX1Q9UKY1 873 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-202ENST00000348513 NFKBIBQ15653 356 aa13.69□□□□□ -0.22
SMARCE1-202ENST00000348513 ZNF526Q8TF50 670 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-202ENST00000348513 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-202ENST00000348513 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
SMARCE1-202ENST00000348513 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
SMARCE1-202ENST00000348513 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-202ENST00000348513 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-202ENST00000348513 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
SMARCE1-202ENST00000348513 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
SMARCE1-202ENST00000348513 PANK3Q9H999 370 aa13.67□□□□□ -0.22
SMARCE1-202ENST00000348513 SKOR2Q2VWA4 1001 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 E9PSI1 815 aa13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 MSH5O43196 834 aa13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-202ENST00000348513 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 MRE11P49959 708 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 CENPJQ9HC77 1338 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
SMARCE1-202ENST00000348513 NLRP13Q86W25 1043 aa13.64□□□□□ -0.23
SMARCE1-202ENST00000348513 PTPRGP23470 1445 aa13.64□□□□□ -0.23
SMARCE1-202ENST00000348513 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
SMARCE1-202ENST00000348513 G3V3G9 751 aa13.63□□□□□ -0.23
SMARCE1-202ENST00000348513 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
SMARCE1-202ENST00000348513 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
SMARCE1-202ENST00000348513 RDXP35241 583 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-202ENST00000348513 IPO4Q8TEX9 1081 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-202ENST00000348513 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
SMARCE1-202ENST00000348513 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
SMARCE1-202ENST00000348513 CLGNO14967 610 aa13.62□□□□□ -0.23
SMARCE1-202ENST00000348513 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-202ENST00000348513 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
SMARCE1-202ENST00000348513 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-202ENST00000348513 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
SMARCE1-202ENST00000348513 UQCRHP07919 91 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms