RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ITSN2Q9NZM3 1697 aa7.69□□□□□ -1.18
VCAM1-202ENST00000347652 ABCC1P33527 1531 aa7.69□□□□□ -1.18
VCAM1-202ENST00000347652 HNRNPMP52272 730 aaKnown RBP eCLIP7.69□□□□□ -1.18
VCAM1-202ENST00000347652 POGZQ7Z3K3 1410 aa7.68□□□□□ -1.18
VCAM1-202ENST00000347652 RRBP1Q9P2E9 1410 aaKnown RBP7.68□□□□□ -1.18
VCAM1-202ENST00000347652 SYCP2Q9BX26 1530 aa7.68□□□□□ -1.18
VCAM1-202ENST00000347652 FGD6Q6ZV73 1430 aa7.68□□□□□ -1.18
VCAM1-202ENST00000347652 SIGLEC1Q9BZZ2 1709 aa7.68□□□□□ -1.18
VCAM1-202ENST00000347652 TCOF1Q13428 1488 aaKnown RBP7.67□□□□□ -1.18
VCAM1-202ENST00000347652 ZBTB7CA1YPR0 619 aa7.66□□□□□ -1.18
VCAM1-202ENST00000347652 PTPN23Q9H3S7 1636 aa7.66□□□□□ -1.18
VCAM1-202ENST00000347652 KDM4FA0A1W2PPD8 638 aa7.66□□□□□ -1.18
VCAM1-202ENST00000347652 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
VCAM1-202ENST00000347652 ZMYND15Q9H091 742 aa7.66□□□□□ -1.18
VCAM1-202ENST00000347652 PIAS4Q8N2W9 510 aaPredicted RBP7.65□□□□□ -1.18
VCAM1-202ENST00000347652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.65□□□□□ -1.18
VCAM1-202ENST00000347652 ZMYM4Q5VZL5 1548 aa7.65□□□□□ -1.18
VCAM1-202ENST00000347652 KDM5CP41229 1560 aa7.65□□□□□ -1.18
VCAM1-202ENST00000347652 CAMSAP2Q08AD1 1489 aa7.65□□□□□ -1.19
VCAM1-202ENST00000347652 ZNF518AQ6AHZ1 1483 aa7.65□□□□□ -1.19
VCAM1-202ENST00000347652 ARHGEF40Q8TER5 1519 aa7.64□□□□□ -1.19
VCAM1-202ENST00000347652 MBD5Q9P267 1494 aa7.64□□□□□ -1.19
VCAM1-202ENST00000347652 ZFYVE16Q7Z3T8 1539 aa7.64□□□□□ -1.19
VCAM1-202ENST00000347652 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
VCAM1-202ENST00000347652 FAM50AQ14320 339 aaKnown RBP7.63□□□□□ -1.19
VCAM1-202ENST00000347652 RSPH6AQ9H0K4 717 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 KIDINS220Q9ULH0 1771 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 ABCA6Q8N139 1617 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 KIAA1107Q9UPP5 1409 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 PLEKHH2Q8IVE3 1493 aa7.63□□□□□ -1.19
VCAM1-202ENST00000347652 DIP2CQ9Y2E4 1556 aa7.62□□□□□ -1.19
VCAM1-202ENST00000347652 ARID4BQ4LE39 1312 aaPredicted RBP7.61□□□□□ -1.19
VCAM1-202ENST00000347652 ARHGEF5Q12774 1597 aa7.61□□□□□ -1.19
VCAM1-202ENST00000347652 MYCNP04198 464 aaPredicted RBP7.61□□□□□ -1.19
VCAM1-202ENST00000347652 MLECQ14165 292 aa7.61□□□□□ -1.19
VCAM1-202ENST00000347652 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
VCAM1-202ENST00000347652 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
VCAM1-202ENST00000347652 SPAG9O60271 1321 aaKnown RBP7.61□□□□□ -1.19
VCAM1-202ENST00000347652 MLH3Q9UHC1 1453 aa7.61□□□□□ -1.19
VCAM1-202ENST00000347652 RSPH4AQ5TD94 716 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 LMOD2Q6P5Q4 547 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 MAGI2Q86UL8 1455 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 KCTD17Q8N5Z5 321 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 ABCC5O15440 1437 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 DAPK1P53355 1430 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 ATP7AQ04656 1500 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 INO80Q9ULG1 1556 aaPredicted RBP7.6□□□□□ -1.19
VCAM1-202ENST00000347652 DNMT1P26358 1616 aaKnown RBP7.6□□□□□ -1.19
VCAM1-202ENST00000347652 ATP10AO60312 1499 aa7.6□□□□□ -1.19
VCAM1-202ENST00000347652 CCDC141Q6ZP82 1450 aa7.59□□□□□ -1.19
VCAM1-202ENST00000347652 PTPRKQ15262 1439 aa7.59□□□□□ -1.19
VCAM1-202ENST00000347652 RAD21O60216 631 aa7.59□□□□□ -1.19
VCAM1-202ENST00000347652 C9orf84Q5VXU9 1444 aa7.59□□□□□ -1.19
VCAM1-202ENST00000347652 MTMR7Q9Y216 660 aa7.59□□□□□ -1.19
VCAM1-202ENST00000347652 BCORL1Q5H9F3 1711 aa7.59□□□□□ -1.2
VCAM1-202ENST00000347652 CROCC2H7BZ55 1655 aa7.58□□□□□ -1.2
VCAM1-202ENST00000347652 MADDQ8WXG6 1647 aa7.58□□□□□ -1.2
VCAM1-202ENST00000347652 HSP90B1P14625 803 aaKnown RBP7.58□□□□□ -1.2
VCAM1-202ENST00000347652 SHANK2Q9UPX8 1470 aa7.58□□□□□ -1.2
VCAM1-202ENST00000347652 ADAMTSL3P82987 1691 aa7.58□□□□□ -1.2
VCAM1-202ENST00000347652 APBB1O00213 710 aa7.57□□□□□ -1.2
VCAM1-202ENST00000347652 ITGAEP38570 1179 aa7.57□□□□□ -1.2
VCAM1-202ENST00000347652 SLC24A3Q9HC58 644 aa7.57□□□□□ -1.2
VCAM1-202ENST00000347652 CHIC2Q9UKJ5 165 aa7.57□□□□□ -1.2
VCAM1-202ENST00000347652 MAST1Q9Y2H9 1570 aa7.57□□□□□ -1.2
VCAM1-202ENST00000347652 ADGBQ8N7X0 1667 aa7.56□□□□□ -1.2
VCAM1-202ENST00000347652 TSPY4P0CV99 314 aa7.56□□□□□ -1.2
VCAM1-202ENST00000347652 TSPY10P0CW01 314 aa7.56□□□□□ -1.2
VCAM1-202ENST00000347652 PCGF6Q9BYE7 350 aa7.56□□□□□ -1.2
VCAM1-202ENST00000347652 ROCK1Q13464 1354 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 ADGRL2O95490 1459 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 A2MP01023 1474 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 PLXNC1O60486 1568 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 RTEL1-TNFRSF6BF6WH68 1400 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 RIMS1Q86UR5 1692 aaKnown RBP7.55□□□□□ -1.2
VCAM1-202ENST00000347652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
VCAM1-202ENST00000347652 REREQ9P2R6 1566 aa7.55□□□□□ -1.2
VCAM1-202ENST00000347652 RBM25P49756 843 aaKnown RBP7.55□□□□□ -1.2
VCAM1-202ENST00000347652 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
VCAM1-202ENST00000347652 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
VCAM1-202ENST00000347652 NCOA1Q15788 1441 aa7.54□□□□□ -1.2
VCAM1-202ENST00000347652 FER1L4A9Z1Z3 1794 aa7.54□□□□□ -1.2
VCAM1-202ENST00000347652 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
VCAM1-202ENST00000347652 PTPRMP28827 1452 aa7.53□□□□□ -1.2
VCAM1-202ENST00000347652 SPDYE4A6NLX3 237 aa7.53□□□□□ -1.2
VCAM1-202ENST00000347652 CEBPAP49715 358 aaPredicted RBP7.53□□□□□ -1.2
VCAM1-202ENST00000347652 GGT6Q6P531 493 aa7.53□□□□□ -1.2
VCAM1-202ENST00000347652 ANKRD30AQ9BXX3 1397 aa7.53□□□□□ -1.2
VCAM1-202ENST00000347652 AGLP35573 1532 aa7.53□□□□□ -1.2
VCAM1-202ENST00000347652 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.2
VCAM1-202ENST00000347652 HFM1A2PYH4 1435 aa7.52□□□□□ -1.21
VCAM1-202ENST00000347652 NAIPQ13075 1403 aa7.52□□□□□ -1.21
VCAM1-202ENST00000347652 KIF3BO15066 747 aa7.52□□□□□ -1.21
VCAM1-202ENST00000347652 KIF15Q9NS87 1388 aa7.52□□□□□ -1.21
VCAM1-202ENST00000347652 SETD5Q9C0A6 1442 aa7.51□□□□□ -1.21
VCAM1-202ENST00000347652 GCC2Q8IWJ2 1684 aa7.51□□□□□ -1.21
VCAM1-202ENST00000347652 NKX1-1Q15270 411 aaPredicted RBP7.5□□□□□ -1.21
VCAM1-202ENST00000347652 DUOX2Q9NRD8 1548 aa7.5□□□□□ -1.21
VCAM1-202ENST00000347652 PUS7Q96PZ0 661 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms