RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 HNRNPMP52272 730 aaKnown RBP eCLIP23.71■■□□□ 1.39
VHL-202ENST00000345392 TCERG1O14776 1098 aaKnown RBP23.7■■□□□ 1.39
VHL-202ENST00000345392 IL27Q8NEV9 243 aa23.7■■□□□ 1.39
VHL-202ENST00000345392 MYBBP1AQ9BQG0 1328 aaKnown RBP23.7■■□□□ 1.39
VHL-202ENST00000345392 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
VHL-202ENST00000345392 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
VHL-202ENST00000345392 CROCC2H7BZ55 1655 aa23.68■■□□□ 1.38
VHL-202ENST00000345392 NEFMP07197 916 aa23.68■■□□□ 1.38
VHL-202ENST00000345392 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
VHL-202ENST00000345392 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
VHL-202ENST00000345392 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
VHL-202ENST00000345392 ANO8Q9HCE9 1232 aaPredicted RBP23.67■■□□□ 1.38
VHL-202ENST00000345392 CARMIL2Q6F5E8 1435 aa23.66■■□□□ 1.38
VHL-202ENST00000345392 BACH2Q9BYV9 841 aa23.66■■□□□ 1.38
VHL-202ENST00000345392 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
VHL-202ENST00000345392 RALBP1Q15311 655 aa23.65■■□□□ 1.38
VHL-202ENST00000345392 SKAP1Q86WV1 359 aa23.65■■□□□ 1.38
VHL-202ENST00000345392 RTN4Q9NQC3 1192 aaKnown RBP23.65■■□□□ 1.38
VHL-202ENST00000345392 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
VHL-202ENST00000345392 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
VHL-202ENST00000345392 PLIN1O60240 522 aa23.64■■□□□ 1.37
VHL-202ENST00000345392 ADCY10Q96PN6 1610 aa23.63■■□□□ 1.37
VHL-202ENST00000345392 CDC42BPAQ5VT25 1732 aa23.63■■□□□ 1.37
VHL-202ENST00000345392 TSPY4P0CV99 314 aa23.62■■□□□ 1.37
VHL-202ENST00000345392 TSPY10P0CW01 314 aa23.62■■□□□ 1.37
VHL-202ENST00000345392 ATP10BO94823 1461 aa23.62■■□□□ 1.37
VHL-202ENST00000345392 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
VHL-202ENST00000345392 UHRF1BP1Q6BDS2 1440 aa23.6■■□□□ 1.37
VHL-202ENST00000345392 ABCC10Q5T3U5 1492 aa23.58■■□□□ 1.37
VHL-202ENST00000345392 RGL3Q3MIN7 710 aa23.57■■□□□ 1.36
VHL-202ENST00000345392 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
VHL-202ENST00000345392 MS4A1P11836 297 aa23.56■■□□□ 1.36
VHL-202ENST00000345392 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
VHL-202ENST00000345392 KTN1Q86UP2 1357 aaKnown RBP23.54■■□□□ 1.36
VHL-202ENST00000345392 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
VHL-202ENST00000345392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.369e-12■□□□□ 9.2
VHL-202ENST00000345392 PTPRGP23470 1445 aa23.53■■□□□ 1.36
VHL-202ENST00000345392 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
VHL-202ENST00000345392 ABCA8O94911 1581 aa23.53■■□□□ 1.36
VHL-202ENST00000345392 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
VHL-202ENST00000345392 PRKCSHP14314 528 aaPredicted RBP23.51■■□□□ 1.35
VHL-202ENST00000345392 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
VHL-202ENST00000345392 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
VHL-202ENST00000345392 NBPF1Q3BBV0 1214 aa23.48■■□□□ 1.35
VHL-202ENST00000345392 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
VHL-202ENST00000345392 SHANK2Q9UPX8 1470 aa23.47■■□□□ 1.35
VHL-202ENST00000345392 SLC4A3P48751 1232 aa23.46■■□□□ 1.35
VHL-202ENST00000345392 PER1O15534 1290 aaPredicted RBP23.46■■□□□ 1.35
VHL-202ENST00000345392 ARHGEF12Q9NZN5 1544 aa23.45■■□□□ 1.34
VHL-202ENST00000345392 C20orf194Q5TEA3 1177 aa23.45■■□□□ 1.34
VHL-202ENST00000345392 E9PCH4 1651 aa23.43■■□□□ 1.34
VHL-202ENST00000345392 CYB5RLQ6IPT4 315 aa23.43■■□□□ 1.34
VHL-202ENST00000345392 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
VHL-202ENST00000345392 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
VHL-202ENST00000345392 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
VHL-202ENST00000345392 DDRGK1Q96HY6 314 aa23.4■■□□□ 1.34
VHL-202ENST00000345392 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
VHL-202ENST00000345392 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
VHL-202ENST00000345392 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
VHL-202ENST00000345392 NFKBIBQ15653 356 aa23.37■■□□□ 1.33
VHL-202ENST00000345392 PANK3Q9H999 370 aa23.37■■□□□ 1.33
VHL-202ENST00000345392 BRPF3Q9ULD4 1205 aa23.37■■□□□ 1.33
VHL-202ENST00000345392 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
VHL-202ENST00000345392 SYCP2Q9BX26 1530 aa23.36■■□□□ 1.33
VHL-202ENST00000345392 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
VHL-202ENST00000345392 GSE1Q14687 1217 aa23.35■■□□□ 1.33
VHL-202ENST00000345392 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
VHL-202ENST00000345392 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
VHL-202ENST00000345392 DISP3Q9P2K9 1392 aa23.33■■□□□ 1.33
VHL-202ENST00000345392 PLA2R1Q13018 1463 aa23.32■■□□□ 1.32
VHL-202ENST00000345392 BLMP54132 1417 aaPredicted RBP23.32■■□□□ 1.32
VHL-202ENST00000345392 ADAMTS8Q9UP79 889 aa23.32■■□□□ 1.32
VHL-202ENST00000345392 DAXXQ9UER7 740 aaPredicted RBP23.31■■□□□ 1.32
VHL-202ENST00000345392 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
VHL-202ENST00000345392 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
VHL-202ENST00000345392 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
VHL-202ENST00000345392 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
VHL-202ENST00000345392 KDM2BQ8NHM5 1336 aa23.3■■□□□ 1.32
VHL-202ENST00000345392 TESK2Q96S53 571 aa23.3■■□□□ 1.32
VHL-202ENST00000345392 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
VHL-202ENST00000345392 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
VHL-202ENST00000345392 A2MP01023 1474 aa23.29■■□□□ 1.32
VHL-202ENST00000345392 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
VHL-202ENST00000345392 TRPM1Q7Z4N2 1603 aa23.28■■□□□ 1.32
VHL-202ENST00000345392 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
VHL-202ENST00000345392 CENPQQ7L2Z9 268 aaPredicted RBP23.25■■□□□ 1.31
VHL-202ENST00000345392 C8orf34Q49A92 452 aa23.25■■□□□ 1.31
VHL-202ENST00000345392 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
VHL-202ENST00000345392 RGS3P49796 1198 aa23.24■■□□□ 1.31
VHL-202ENST00000345392 FAM161AQ3B820 660 aa23.24■■□□□ 1.31
VHL-202ENST00000345392 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
VHL-202ENST00000345392 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
VHL-202ENST00000345392 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
VHL-202ENST00000345392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.22■■□□□ 1.315e-7■■□□□ 12.4
VHL-202ENST00000345392 ABCC2Q92887 1545 aa23.21■■□□□ 1.31
VHL-202ENST00000345392 TMF1P82094 1093 aa23.21■■□□□ 1.31
VHL-202ENST00000345392 ERBINQ96RT1 1412 aa23.2■■□□□ 1.31
VHL-202ENST00000345392 INSRP06213 1382 aa23.19■■□□□ 1.3
VHL-202ENST00000345392 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
VHL-202ENST00000345392 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms