RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
CT55-202ENST00000344129 A2MP01023 1474 aa18.54■□□□□ 0.56
CT55-202ENST00000344129 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
CT55-202ENST00000344129 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
CT55-202ENST00000344129 DIP2CQ9Y2E4 1556 aa18.52■□□□□ 0.56
CT55-202ENST00000344129 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
CT55-202ENST00000344129 KIF3BO15066 747 aa18.52■□□□□ 0.55
CT55-202ENST00000344129 PKD2Q13563 968 aa18.52■□□□□ 0.55
CT55-202ENST00000344129 FAM135AQ9P2D6 1515 aa18.51■□□□□ 0.55
CT55-202ENST00000344129 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
CT55-202ENST00000344129 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
CT55-202ENST00000344129 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
CT55-202ENST00000344129 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
CT55-202ENST00000344129 ANKRD30BQ9BXX2 1392 aa18.46■□□□□ 0.55
CT55-202ENST00000344129 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
CT55-202ENST00000344129 KANK1Q14678 1352 aa18.42■□□□□ 0.54
CT55-202ENST00000344129 ATP10AO60312 1499 aa18.42■□□□□ 0.54
CT55-202ENST00000344129 GGT6Q6P531 493 aa18.42■□□□□ 0.54
CT55-202ENST00000344129 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
CT55-202ENST00000344129 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
CT55-202ENST00000344129 VWDEQ8N2E2 1590 aa18.4■□□□□ 0.54
CT55-202ENST00000344129 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.54
CT55-202ENST00000344129 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.53
CT55-202ENST00000344129 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
CT55-202ENST00000344129 CEP152O94986 1710 aa18.36■□□□□ 0.53
CT55-202ENST00000344129 TET3O43151 1660 aa18.36■□□□□ 0.53
CT55-202ENST00000344129 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
CT55-202ENST00000344129 E9PCH4 1651 aa18.35■□□□□ 0.53
CT55-202ENST00000344129 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
CT55-202ENST00000344129 REREQ9P2R6 1566 aa18.35■□□□□ 0.53
CT55-202ENST00000344129 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
CT55-202ENST00000344129 PLA2R1Q13018 1463 aa18.33■□□□□ 0.52
CT55-202ENST00000344129 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
CT55-202ENST00000344129 ABCC3O15438 1527 aa18.31■□□□□ 0.52
CT55-202ENST00000344129 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
CT55-202ENST00000344129 AGLP35573 1532 aa18.3■□□□□ 0.52
CT55-202ENST00000344129 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
CT55-202ENST00000344129 MLECQ14165 292 aa18.29■□□□□ 0.52
CT55-202ENST00000344129 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
CT55-202ENST00000344129 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
CT55-202ENST00000344129 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
CT55-202ENST00000344129 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
CT55-202ENST00000344129 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
CT55-202ENST00000344129 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
CT55-202ENST00000344129 PTPRTO14522 1441 aa18.25■□□□□ 0.51
CT55-202ENST00000344129 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
CT55-202ENST00000344129 NPATQ14207 1427 aa18.24■□□□□ 0.51
CT55-202ENST00000344129 TRPM2O94759 1503 aa18.24■□□□□ 0.51
CT55-202ENST00000344129 CFAP65Q6ZU64 1925 aaKnown RBP18.22■□□□□ 0.51
CT55-202ENST00000344129 CLTCL1P53675 1640 aa18.21■□□□□ 0.51
CT55-202ENST00000344129 UGGT1Q9NYU2 1555 aa18.2■□□□□ 0.5
CT55-202ENST00000344129 CLTCQ00610 1675 aaKnown RBP18.2■□□□□ 0.5
CT55-202ENST00000344129 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
CT55-202ENST00000344129 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
CT55-202ENST00000344129 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
CT55-202ENST00000344129 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
CT55-202ENST00000344129 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
CT55-202ENST00000344129 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
CT55-202ENST00000344129 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
CT55-202ENST00000344129 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
CT55-202ENST00000344129 CNTLNQ9NXG0 1405 aa18.14■□□□□ 0.49
CT55-202ENST00000344129 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
CT55-202ENST00000344129 NOS1P29475 1434 aa18.13■□□□□ 0.49
CT55-202ENST00000344129 SPATA31E1Q6ZUB1 1445 aa18.13■□□□□ 0.49
CT55-202ENST00000344129 FBXO31Q5XUX0 539 aaPredicted RBP18.13■□□□□ 0.49
CT55-202ENST00000344129 SYNMO15061 1565 aa18.12■□□□□ 0.49
CT55-202ENST00000344129 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
CT55-202ENST00000344129 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
CT55-202ENST00000344129 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
CT55-202ENST00000344129 KIF1BO60333 1816 aa18.09■□□□□ 0.49
CT55-202ENST00000344129 ERVK-7P63135 1459 aa18.09■□□□□ 0.49
CT55-202ENST00000344129 MROH2AA6NES4 1674 aa18.08■□□□□ 0.49
CT55-202ENST00000344129 ZMYM3Q14202 1370 aa18.08■□□□□ 0.48
CT55-202ENST00000344129 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
CT55-202ENST00000344129 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
CT55-202ENST00000344129 ADGRB3O60242 1522 aa18.05■□□□□ 0.48
CT55-202ENST00000344129 IDI1Q13907 227 aa18.05■□□□□ 0.48
CT55-202ENST00000344129 HIRIP3Q9BW71 556 aaPredicted RBP18.04■□□□□ 0.48
CT55-202ENST00000344129 FER1L4A9Z1Z3 1794 aa18.04■□□□□ 0.48
CT55-202ENST00000344129 PRAG1Q86YV5 1406 aa18.03■□□□□ 0.48
CT55-202ENST00000344129 SPATA31D1Q6ZQQ2 1576 aa18.03■□□□□ 0.48
CT55-202ENST00000344129 NEURL4Q96JN8 1562 aa18.03■□□□□ 0.48
CT55-202ENST00000344129 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
CT55-202ENST00000344129 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
CT55-202ENST00000344129 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
CT55-202ENST00000344129 RALGAPBQ86X10 1494 aa18■□□□□ 0.47
CT55-202ENST00000344129 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
CT55-202ENST00000344129 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
CT55-202ENST00000344129 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
CT55-202ENST00000344129 TRPM1Q7Z4N2 1603 aa17.97■□□□□ 0.47
CT55-202ENST00000344129 C3P01024 1663 aa17.97■□□□□ 0.47
CT55-202ENST00000344129 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
CT55-202ENST00000344129 TMEM131LA2VDJ0 1609 aa17.97■□□□□ 0.47
CT55-202ENST00000344129 TNRQ92752 1358 aa17.96■□□□□ 0.47
CT55-202ENST00000344129 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
CT55-202ENST00000344129 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
CT55-202ENST00000344129 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
CT55-202ENST00000344129 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
CT55-202ENST00000344129 RIMS1Q86UR5 1692 aaKnown RBP17.95■□□□□ 0.46
CT55-202ENST00000344129 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms