RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
SSX2IP-201ENST00000342203 C20orf194Q5TEA3 1177 aa15.75■□□□□ 0.11
SSX2IP-201ENST00000342203 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
SSX2IP-201ENST00000342203 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
SSX2IP-201ENST00000342203 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
SSX2IP-201ENST00000342203 TRAK2O60296 914 aa15.73■□□□□ 0.11
SSX2IP-201ENST00000342203 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.111e-7■■■■□ 19.5
SSX2IP-201ENST00000342203 FOXD4L6Q3SYB3 417 aaPredicted RBP15.73■□□□□ 0.11
SSX2IP-201ENST00000342203 FOXD4L3Q6VB84 417 aaPredicted RBP15.73■□□□□ 0.11
SSX2IP-201ENST00000342203 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
SSX2IP-201ENST00000342203 ANKRD30AQ9BXX3 1397 aa15.72■□□□□ 0.11
SSX2IP-201ENST00000342203 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
SSX2IP-201ENST00000342203 UBE2Q2Q8WVN8 375 aa15.71■□□□□ 0.11
SSX2IP-201ENST00000342203 BCAR3O75815 825 aa15.71■□□□□ 0.11
SSX2IP-201ENST00000342203 E9PSI1 815 aa15.7■□□□□ 0.1
SSX2IP-201ENST00000342203 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
SSX2IP-201ENST00000342203 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
SSX2IP-201ENST00000342203 CHAF1AQ13111 956 aaPredicted RBP15.7■□□□□ 0.1
SSX2IP-201ENST00000342203 PRXQ9BXM0 1461 aa15.69■□□□□ 0.1
SSX2IP-201ENST00000342203 MRE11P49959 708 aa15.69■□□□□ 0.1
SSX2IP-201ENST00000342203 C22orf23Q9BZE7 217 aa15.69■□□□□ 0.1
SSX2IP-201ENST00000342203 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
SSX2IP-201ENST00000342203 A0A0U1RQG5 324 aaPredicted RBP15.68■□□□□ 0.1
SSX2IP-201ENST00000342203 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
SSX2IP-201ENST00000342203 R3HCC1Q9Y3T6 440 aaKnown RBP15.67■□□□□ 0.1
SSX2IP-201ENST00000342203 ELL2O00472 640 aaPredicted RBP15.65■□□□□ 0.1
SSX2IP-201ENST00000342203 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
SSX2IP-201ENST00000342203 PTMSP20962 102 aa15.65■□□□□ 0.1
SSX2IP-201ENST00000342203 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
SSX2IP-201ENST00000342203 DRC7Q8IY82 874 aa15.64■□□□□ 0.09
SSX2IP-201ENST00000342203 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
SSX2IP-201ENST00000342203 NBPF1Q3BBV0 1214 aa15.64■□□□□ 0.09
SSX2IP-201ENST00000342203 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
SSX2IP-201ENST00000342203 TAOK2Q9UL54 1235 aa15.63■□□□□ 0.09
SSX2IP-201ENST00000342203 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
SSX2IP-201ENST00000342203 HFM1A2PYH4 1435 aa15.63■□□□□ 0.09
SSX2IP-201ENST00000342203 CFTRP13569 1480 aa15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 ZKSCAN2Q63HK3 967 aa15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 PDZRN3Q9UPQ7 1066 aa15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 ESPNB1AK53 854 aa15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
SSX2IP-201ENST00000342203 MCM4P33991 863 aa15.61■□□□□ 0.09
SSX2IP-201ENST00000342203 NASPP49321 788 aaPredicted RBP15.61■□□□□ 0.09
SSX2IP-201ENST00000342203 NAIPQ13075 1403 aa15.6■□□□□ 0.09
SSX2IP-201ENST00000342203 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
SSX2IP-201ENST00000342203 GOLGA6L4A6NEF3 574 aa15.59■□□□□ 0.09
SSX2IP-201ENST00000342203 STK26Q9P289 416 aa15.59■□□□□ 0.09
SSX2IP-201ENST00000342203 RNF214Q8ND24 703 aa15.59■□□□□ 0.09
SSX2IP-201ENST00000342203 GRPEL1Q9HAV7 217 aa15.59■□□□□ 0.09
SSX2IP-201ENST00000342203 ZMYND15Q9H091 742 aa15.58■□□□□ 0.09
SSX2IP-201ENST00000342203 TIAM1Q13009 1591 aa15.58■□□□□ 0.09
SSX2IP-201ENST00000342203 MCTP1Q6DN14 999 aa15.58■□□□□ 0.08
SSX2IP-201ENST00000342203 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
SSX2IP-201ENST00000342203 DZIP1LQ8IYY4 767 aaKnown RBP15.58■□□□□ 0.08
SSX2IP-201ENST00000342203 MPNDQ8N594 471 aa15.58■□□□□ 0.08
SSX2IP-201ENST00000342203 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
SSX2IP-201ENST00000342203 SOX12O15370 315 aa15.57■□□□□ 0.08
SSX2IP-201ENST00000342203 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
SSX2IP-201ENST00000342203 KIAA1211Q6ZU35 1233 aa15.57■□□□□ 0.08
SSX2IP-201ENST00000342203 KCNJ4P48050 445 aa15.56■□□□□ 0.08
SSX2IP-201ENST00000342203 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
SSX2IP-201ENST00000342203 PPP2R1AP30153 589 aa15.56■□□□□ 0.08
SSX2IP-201ENST00000342203 RRP9O43818 475 aaKnown RBP15.56■□□□□ 0.08
SSX2IP-201ENST00000342203 TRAK1Q9UPV9 953 aa15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 CASKIN1Q8WXD9 1431 aa15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 MCCP23508 829 aa15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
SSX2IP-201ENST00000342203 CAVIN1Q6NZI2 390 aaKnown RBP15.54■□□□□ 0.08
SSX2IP-201ENST00000342203 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
SSX2IP-201ENST00000342203 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
SSX2IP-201ENST00000342203 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
SSX2IP-201ENST00000342203 ST18O60284 1047 aa15.53■□□□□ 0.08
SSX2IP-201ENST00000342203 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
SSX2IP-201ENST00000342203 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
SSX2IP-201ENST00000342203 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
SSX2IP-201ENST00000342203 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
SSX2IP-201ENST00000342203 TPM2P07951 284 aa15.51■□□□□ 0.07
SSX2IP-201ENST00000342203 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
SSX2IP-201ENST00000342203 TBC1D2Q9BYX2 928 aa15.5■□□□□ 0.07
SSX2IP-201ENST00000342203 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
SSX2IP-201ENST00000342203 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
SSX2IP-201ENST00000342203 TCP11L2Q8N4U5 519 aa15.49■□□□□ 0.07
SSX2IP-201ENST00000342203 FGD1P98174 961 aa15.49■□□□□ 0.07
SSX2IP-201ENST00000342203 SLC4A10Q6U841 1118 aa15.49■□□□□ 0.07
SSX2IP-201ENST00000342203 PDE3AQ14432 1141 aa15.48■□□□□ 0.07
SSX2IP-201ENST00000342203 XRCC6P12956 609 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSX2IP-201ENST00000342203 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
SSX2IP-201ENST00000342203 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
SSX2IP-201ENST00000342203 GGT6Q6P531 493 aa15.46■□□□□ 0.07
SSX2IP-201ENST00000342203 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.07
SSX2IP-201ENST00000342203 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.06
SSX2IP-201ENST00000342203 C14orf37Q86TY3 774 aa15.46■□□□□ 0.06
SSX2IP-201ENST00000342203 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.06
SSX2IP-201ENST00000342203 IGHDP01880 384 aa15.45■□□□□ 0.06
SSX2IP-201ENST00000342203 RUNDC1Q96C34 613 aa15.45■□□□□ 0.06
SSX2IP-201ENST00000342203 ZNF771Q7L3S4 317 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms