RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
TMEM220-201ENST00000341871 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
TMEM220-201ENST00000341871 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
TMEM220-201ENST00000341871 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
TMEM220-201ENST00000341871 B4GALNT3Q6L9W6 998 aa16.28■□□□□ 0.2
TMEM220-201ENST00000341871 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.2
TMEM220-201ENST00000341871 NEFMP07197 916 aa16.27■□□□□ 0.19
TMEM220-201ENST00000341871 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
TMEM220-201ENST00000341871 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
TMEM220-201ENST00000341871 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
TMEM220-201ENST00000341871 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
TMEM220-201ENST00000341871 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
TMEM220-201ENST00000341871 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
TMEM220-201ENST00000341871 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
TMEM220-201ENST00000341871 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
TMEM220-201ENST00000341871 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
TMEM220-201ENST00000341871 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
TMEM220-201ENST00000341871 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
TMEM220-201ENST00000341871 PLEKHH2Q8IVE3 1493 aa16.17■□□□□ 0.18
TMEM220-201ENST00000341871 ABCA8O94911 1581 aa16.17■□□□□ 0.18
TMEM220-201ENST00000341871 KIF3BO15066 747 aa16.16■□□□□ 0.18
TMEM220-201ENST00000341871 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
TMEM220-201ENST00000341871 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
TMEM220-201ENST00000341871 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
TMEM220-201ENST00000341871 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
TMEM220-201ENST00000341871 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
TMEM220-201ENST00000341871 PDE4CQ08493 712 aa16.13■□□□□ 0.17
TMEM220-201ENST00000341871 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
TMEM220-201ENST00000341871 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
TMEM220-201ENST00000341871 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
TMEM220-201ENST00000341871 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
TMEM220-201ENST00000341871 PANK3Q9H999 370 aa16.1■□□□□ 0.17
TMEM220-201ENST00000341871 CHD1O14646 1710 aa16.09■□□□□ 0.17
TMEM220-201ENST00000341871 GGT6Q6P531 493 aa16.09■□□□□ 0.17
TMEM220-201ENST00000341871 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
TMEM220-201ENST00000341871 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.17
TMEM220-201ENST00000341871 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.17
TMEM220-201ENST00000341871 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
TMEM220-201ENST00000341871 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
TMEM220-201ENST00000341871 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.16
TMEM220-201ENST00000341871 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.16
TMEM220-201ENST00000341871 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
TMEM220-201ENST00000341871 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
TMEM220-201ENST00000341871 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
TMEM220-201ENST00000341871 PNISRQ8TF01 805 aaKnown RBP16.05■□□□□ 0.16
TMEM220-201ENST00000341871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
TMEM220-201ENST00000341871 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
TMEM220-201ENST00000341871 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
TMEM220-201ENST00000341871 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
TMEM220-201ENST00000341871 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
TMEM220-201ENST00000341871 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
TMEM220-201ENST00000341871 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
TMEM220-201ENST00000341871 ADGBQ8N7X0 1667 aa16.03■□□□□ 0.16
TMEM220-201ENST00000341871 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
TMEM220-201ENST00000341871 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
TMEM220-201ENST00000341871 TMF1P82094 1093 aa16.01■□□□□ 0.15
TMEM220-201ENST00000341871 PLIN1O60240 522 aa16.01■□□□□ 0.15
TMEM220-201ENST00000341871 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM220-201ENST00000341871 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
TMEM220-201ENST00000341871 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
TMEM220-201ENST00000341871 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
TMEM220-201ENST00000341871 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
TMEM220-201ENST00000341871 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
TMEM220-201ENST00000341871 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
TMEM220-201ENST00000341871 GSE1Q14687 1217 aa15.99■□□□□ 0.15
TMEM220-201ENST00000341871 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
TMEM220-201ENST00000341871 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
TMEM220-201ENST00000341871 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
TMEM220-201ENST00000341871 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
TMEM220-201ENST00000341871 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
TMEM220-201ENST00000341871 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
TMEM220-201ENST00000341871 FGD1P98174 961 aa15.97■□□□□ 0.15
TMEM220-201ENST00000341871 KNSTRNQ9Y448 316 aa15.97■□□□□ 0.15
TMEM220-201ENST00000341871 ABCC2Q92887 1545 aa15.97■□□□□ 0.15
TMEM220-201ENST00000341871 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
TMEM220-201ENST00000341871 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
TMEM220-201ENST00000341871 TESK2Q96S53 571 aa15.96■□□□□ 0.15
TMEM220-201ENST00000341871 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
TMEM220-201ENST00000341871 A2MP01023 1474 aa15.96■□□□□ 0.15
TMEM220-201ENST00000341871 RAPGEF3O95398 923 aa15.96■□□□□ 0.14
TMEM220-201ENST00000341871 PLCH2O75038 1416 aa15.96■□□□□ 0.14
TMEM220-201ENST00000341871 NLRP13Q86W25 1043 aa15.95■□□□□ 0.14
TMEM220-201ENST00000341871 KDM5CP41229 1560 aa15.95■□□□□ 0.14
TMEM220-201ENST00000341871 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
TMEM220-201ENST00000341871 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
TMEM220-201ENST00000341871 HSP90AA1P07900 732 aaKnown RBP15.94■□□□□ 0.14
TMEM220-201ENST00000341871 RALBP1Q15311 655 aa15.94■□□□□ 0.14
TMEM220-201ENST00000341871 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
TMEM220-201ENST00000341871 PDIA4P13667 645 aaKnown RBP15.94■□□□□ 0.14
TMEM220-201ENST00000341871 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
TMEM220-201ENST00000341871 AAMPQ13685 434 aa15.93■□□□□ 0.14
TMEM220-201ENST00000341871 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
TMEM220-201ENST00000341871 UHRF1BP1Q6BDS2 1440 aa15.92■□□□□ 0.14
TMEM220-201ENST00000341871 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
TMEM220-201ENST00000341871 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
TMEM220-201ENST00000341871 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
TMEM220-201ENST00000341871 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
TMEM220-201ENST00000341871 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
TMEM220-201ENST00000341871 PER1O15534 1290 aaPredicted RBP15.9■□□□□ 0.14
TMEM220-201ENST00000341871 FRAT1Q92837 279 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms