RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
TPM3-207ENST00000341372 ATP10AO60312 1499 aa16.02■□□□□ 0.16
TPM3-207ENST00000341372 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
TPM3-207ENST00000341372 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
TPM3-207ENST00000341372 ADAMTSL3P82987 1691 aa16.01■□□□□ 0.15
TPM3-207ENST00000341372 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
TPM3-207ENST00000341372 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
TPM3-207ENST00000341372 ZNF644Q9H582 1327 aaPredicted RBP16■□□□□ 0.15
TPM3-207ENST00000341372 ATP7AQ04656 1500 aa15.99■□□□□ 0.15
TPM3-207ENST00000341372 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■■■□□ 16.5
TPM3-207ENST00000341372 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
TPM3-207ENST00000341372 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
TPM3-207ENST00000341372 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
TPM3-207ENST00000341372 AGLP35573 1532 aa15.96■□□□□ 0.15
TPM3-207ENST00000341372 RTEL1-TNFRSF6BF6WH68 1400 aa15.95■□□□□ 0.14
TPM3-207ENST00000341372 SPAG9O60271 1321 aaKnown RBP15.95■□□□□ 0.14
TPM3-207ENST00000341372 PLXNC1O60486 1568 aa15.94■□□□□ 0.14
TPM3-207ENST00000341372 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
TPM3-207ENST00000341372 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
TPM3-207ENST00000341372 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
TPM3-207ENST00000341372 MAST1Q9Y2H9 1570 aa15.93■□□□□ 0.14
TPM3-207ENST00000341372 FGD6Q6ZV73 1430 aa15.93■□□□□ 0.14
TPM3-207ENST00000341372 RSPH4AQ5TD94 716 aa15.93■□□□□ 0.14
TPM3-207ENST00000341372 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
TPM3-207ENST00000341372 MSH5O43196 834 aa15.92■□□□□ 0.14
TPM3-207ENST00000341372 ECM2O94769 699 aaPredicted RBP15.91■□□□□ 0.14
TPM3-207ENST00000341372 ARID4BQ4LE39 1312 aaPredicted RBP15.9■□□□□ 0.14
TPM3-207ENST00000341372 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
TPM3-207ENST00000341372 FER1L4A9Z1Z3 1794 aa15.89■□□□□ 0.13
TPM3-207ENST00000341372 A2MP01023 1474 aa15.89■□□□□ 0.13
TPM3-207ENST00000341372 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
TPM3-207ENST00000341372 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
TPM3-207ENST00000341372 DNMT1P26358 1616 aaKnown RBP15.88■□□□□ 0.13
TPM3-207ENST00000341372 PTPRMP28827 1452 aa15.88■□□□□ 0.13
TPM3-207ENST00000341372 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
TPM3-207ENST00000341372 ABCC5O15440 1437 aa15.84■□□□□ 0.13
TPM3-207ENST00000341372 DAPK1P53355 1430 aa15.83■□□□□ 0.12
TPM3-207ENST00000341372 RGL2O15211 777 aa15.82■□□□□ 0.12
TPM3-207ENST00000341372 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
TPM3-207ENST00000341372 TSPY4P0CV99 314 aa15.82■□□□□ 0.12
TPM3-207ENST00000341372 TSPY10P0CW01 314 aa15.82■□□□□ 0.12
TPM3-207ENST00000341372 MLECQ14165 292 aa15.8■□□□□ 0.12
TPM3-207ENST00000341372 EIF2AK4Q9P2K8 1649 aaKnown RBP15.79■□□□□ 0.12
TPM3-207ENST00000341372 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
TPM3-207ENST00000341372 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
TPM3-207ENST00000341372 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
TPM3-207ENST00000341372 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
TPM3-207ENST00000341372 ADGRL2O95490 1459 aa15.77■□□□□ 0.12
TPM3-207ENST00000341372 DUOX2Q9NRD8 1548 aa15.77■□□□□ 0.12
TPM3-207ENST00000341372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.113e-7■■□□□ 11.8
TPM3-207ENST00000341372 RNF17Q9BXT8 1623 aaKnown RBP15.77■□□□□ 0.11
TPM3-207ENST00000341372 PODXL2Q9NZ53 605 aa15.76■□□□□ 0.11
TPM3-207ENST00000341372 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
TPM3-207ENST00000341372 C3P01024 1663 aa15.75■□□□□ 0.11
TPM3-207ENST00000341372 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
TPM3-207ENST00000341372 CLTCQ00610 1675 aaKnown RBP15.73■□□□□ 0.11
TPM3-207ENST00000341372 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
TPM3-207ENST00000341372 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
TPM3-207ENST00000341372 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
TPM3-207ENST00000341372 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
TPM3-207ENST00000341372 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
TPM3-207ENST00000341372 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
TPM3-207ENST00000341372 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
TPM3-207ENST00000341372 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.11
TPM3-207ENST00000341372 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
TPM3-207ENST00000341372 PTPRKQ15262 1439 aa15.7■□□□□ 0.1
TPM3-207ENST00000341372 DEPDC5O75140 1603 aa15.7■□□□□ 0.1
TPM3-207ENST00000341372 ZC3H13Q5T200 1668 aaKnown RBP15.7■□□□□ 0.1
TPM3-207ENST00000341372 LMTK3Q96Q04 1460 aa15.69■□□□□ 0.1
TPM3-207ENST00000341372 KIF3BO15066 747 aa15.69■□□□□ 0.1
TPM3-207ENST00000341372 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
TPM3-207ENST00000341372 PREX1Q8TCU6 1659 aa15.69■□□□□ 0.1
TPM3-207ENST00000341372 SETD1BQ9UPS6 1966 aaKnown RBP15.69■□□□□ 0.1
TPM3-207ENST00000341372 SPOCK2Q92563 424 aa15.68■□□□□ 0.1
TPM3-207ENST00000341372 GGT6Q6P531 493 aa15.68■□□□□ 0.1
TPM3-207ENST00000341372 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
TPM3-207ENST00000341372 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
TPM3-207ENST00000341372 NPATQ14207 1427 aa15.67■□□□□ 0.1
TPM3-207ENST00000341372 ZMYM3Q14202 1370 aa15.66■□□□□ 0.1
TPM3-207ENST00000341372 ABCC3O15438 1527 aa15.66■□□□□ 0.1
TPM3-207ENST00000341372 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
TPM3-207ENST00000341372 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
TPM3-207ENST00000341372 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
TPM3-207ENST00000341372 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
TPM3-207ENST00000341372 PZPP20742 1482 aa15.63■□□□□ 0.09
TPM3-207ENST00000341372 CEP152O94986 1710 aa15.62■□□□□ 0.09
TPM3-207ENST00000341372 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
TPM3-207ENST00000341372 ANKRD50Q9ULJ7 1429 aa15.62■□□□□ 0.09
TPM3-207ENST00000341372 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
TPM3-207ENST00000341372 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
TPM3-207ENST00000341372 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
TPM3-207ENST00000341372 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
TPM3-207ENST00000341372 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
TPM3-207ENST00000341372 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
TPM3-207ENST00000341372 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
TPM3-207ENST00000341372 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
TPM3-207ENST00000341372 UNC13BO14795 1591 aa15.59■□□□□ 0.09
TPM3-207ENST00000341372 ARHGAP31Q2M1Z3 1444 aa15.58■□□□□ 0.08
TPM3-207ENST00000341372 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
TPM3-207ENST00000341372 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms