RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 KDM5CP41229 1560 aa20.84■□□□□ 0.93
PERM1-201ENST00000341290 FANCAO15360 1455 aa20.84■□□□□ 0.93
PERM1-201ENST00000341290 DAPK1P53355 1430 aa20.83■□□□□ 0.92
PERM1-201ENST00000341290 ROCK1Q13464 1354 aa20.83■□□□□ 0.92
PERM1-201ENST00000341290 ZMYM4Q5VZL5 1548 aa20.81■□□□□ 0.92
PERM1-201ENST00000341290 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
PERM1-201ENST00000341290 ZBED9Q6R2W3 1325 aa20.81■□□□□ 0.92
PERM1-201ENST00000341290 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
PERM1-201ENST00000341290 ABCC5O15440 1437 aa20.8■□□□□ 0.92
PERM1-201ENST00000341290 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
PERM1-201ENST00000341290 ANO8Q9HCE9 1232 aaPredicted RBP20.8■□□□□ 0.92
PERM1-201ENST00000341290 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
PERM1-201ENST00000341290 TSPOAP1O95153 1857 aa20.8■□□□□ 0.92
PERM1-201ENST00000341290 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
PERM1-201ENST00000341290 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
PERM1-201ENST00000341290 RPRD2Q5VT52 1461 aaKnown RBP20.79■□□□□ 0.92
PERM1-201ENST00000341290 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
PERM1-201ENST00000341290 CCDC141Q6ZP82 1450 aa20.76■□□□□ 0.91
PERM1-201ENST00000341290 EFCAB2Q5VUJ9 269 aa20.75■□□□□ 0.91
PERM1-201ENST00000341290 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
PERM1-201ENST00000341290 BCORL1Q5H9F3 1711 aa20.74■□□□□ 0.91
PERM1-201ENST00000341290 ADGRL1O94910 1474 aa20.73■□□□□ 0.91
PERM1-201ENST00000341290 RSPH4AQ5TD94 716 aa20.73■□□□□ 0.91
PERM1-201ENST00000341290 RTEL1-TNFRSF6BF6WH68 1400 aa20.73■□□□□ 0.91
PERM1-201ENST00000341290 SPATA31E1Q6ZUB1 1445 aa20.73■□□□□ 0.91
PERM1-201ENST00000341290 POGZQ7Z3K3 1410 aa20.73■□□□□ 0.91
PERM1-201ENST00000341290 DEKP35659 375 aaKnown RBP20.72■□□□□ 0.91
PERM1-201ENST00000341290 PKD2Q13563 968 aa20.72■□□□□ 0.91
PERM1-201ENST00000341290 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
PERM1-201ENST00000341290 ERICH6BQ5W0A0 696 aa20.72■□□□□ 0.91
PERM1-201ENST00000341290 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
PERM1-201ENST00000341290 KIDINS220Q9ULH0 1771 aa20.71■□□□□ 0.91
PERM1-201ENST00000341290 ZNF518AQ6AHZ1 1483 aa20.7■□□□□ 0.9
PERM1-201ENST00000341290 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.9
PERM1-201ENST00000341290 HECW2Q9P2P5 1572 aa20.7■□□□□ 0.9
PERM1-201ENST00000341290 REREQ9P2R6 1566 aa20.7■□□□□ 0.9
PERM1-201ENST00000341290 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
PERM1-201ENST00000341290 USP47Q96K76 1375 aa20.68■□□□□ 0.9
PERM1-201ENST00000341290 MAGI2Q86UL8 1455 aa20.67■□□□□ 0.9
PERM1-201ENST00000341290 SALL2Q9Y467 1007 aaPredicted RBP20.65■□□□□ 0.9
PERM1-201ENST00000341290 EIF2AK4Q9P2K8 1649 aaKnown RBP20.65■□□□□ 0.9
PERM1-201ENST00000341290 DHX29Q7Z478 1369 aaKnown RBP20.65■□□□□ 0.9
PERM1-201ENST00000341290 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
PERM1-201ENST00000341290 PZPP20742 1482 aa20.64■□□□□ 0.9
PERM1-201ENST00000341290 ATP7AQ04656 1500 aa20.64■□□□□ 0.89
PERM1-201ENST00000341290 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
PERM1-201ENST00000341290 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
PERM1-201ENST00000341290 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
PERM1-201ENST00000341290 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
PERM1-201ENST00000341290 CARD11Q9BXL7 1154 aa20.61■□□□□ 0.89
PERM1-201ENST00000341290 NBR1Q14596 966 aa20.61■□□□□ 0.89
PERM1-201ENST00000341290 ABCA6Q8N139 1617 aa20.61■□□□□ 0.89
PERM1-201ENST00000341290 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
PERM1-201ENST00000341290 POLR1AO95602 1720 aaPredicted RBP20.6■□□□□ 0.89
PERM1-201ENST00000341290 DIP2CQ9Y2E4 1556 aa20.59■□□□□ 0.89
PERM1-201ENST00000341290 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
PERM1-201ENST00000341290 DEPDC5O75140 1603 aa20.58■□□□□ 0.89
PERM1-201ENST00000341290 PAK3O75914 559 aaPredicted RBP20.58■□□□□ 0.89
PERM1-201ENST00000341290 COL17A1Q9UMD9 1497 aaPredicted RBP20.57■□□□□ 0.88
PERM1-201ENST00000341290 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
PERM1-201ENST00000341290 ST20-MTHFSA0A0A6YYL1 179 aa20.56■□□□□ 0.88
PERM1-201ENST00000341290 SMG6Q86US8 1419 aaKnown RBP20.56■□□□□ 0.88
PERM1-201ENST00000341290 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
PERM1-201ENST00000341290 NUP155O75694 1391 aa20.55■□□□□ 0.88
PERM1-201ENST00000341290 UNC13BO14795 1591 aa20.55■□□□□ 0.88
PERM1-201ENST00000341290 RNF17Q9BXT8 1623 aaKnown RBP20.55■□□□□ 0.88
PERM1-201ENST00000341290 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
PERM1-201ENST00000341290 KDM5DQ9BY66 1539 aa20.52■□□□□ 0.88
PERM1-201ENST00000341290 ERBINQ96RT1 1412 aa20.52■□□□□ 0.88
PERM1-201ENST00000341290 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.88
PERM1-201ENST00000341290 AGLP35573 1532 aa20.52■□□□□ 0.87
PERM1-201ENST00000341290 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
PERM1-201ENST00000341290 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
PERM1-201ENST00000341290 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
PERM1-201ENST00000341290 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
PERM1-201ENST00000341290 RGL3Q3MIN7 710 aa20.48■□□□□ 0.87
PERM1-201ENST00000341290 VWDEQ8N2E2 1590 aa20.47■□□□□ 0.87
PERM1-201ENST00000341290 SIGLEC1Q9BZZ2 1709 aa20.46■□□□□ 0.87
PERM1-201ENST00000341290 MROH1Q8NDA8 1641 aa20.46■□□□□ 0.87
PERM1-201ENST00000341290 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
PERM1-201ENST00000341290 TSPY4P0CV99 314 aa20.44■□□□□ 0.86
PERM1-201ENST00000341290 TSPY10P0CW01 314 aa20.44■□□□□ 0.86
PERM1-201ENST00000341290 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
PERM1-201ENST00000341290 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
PERM1-201ENST00000341290 SPAG9O60271 1321 aaKnown RBP20.43■□□□□ 0.86
PERM1-201ENST00000341290 RNF123Q5XPI4 1314 aa20.43■□□□□ 0.86
PERM1-201ENST00000341290 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
PERM1-201ENST00000341290 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
PERM1-201ENST00000341290 ATP10AO60312 1499 aa20.43■□□□□ 0.86
PERM1-201ENST00000341290 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
PERM1-201ENST00000341290 A2MP01023 1474 aa20.42■□□□□ 0.86
PERM1-201ENST00000341290 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
PERM1-201ENST00000341290 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
PERM1-201ENST00000341290 RTN4Q9NQC3 1192 aaKnown RBP20.41■□□□□ 0.86
PERM1-201ENST00000341290 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
PERM1-201ENST00000341290 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
PERM1-201ENST00000341290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.86
PERM1-201ENST00000341290 MYBBP1AQ9BQG0 1328 aaKnown RBP20.39■□□□□ 0.86
PERM1-201ENST00000341290 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
PERM1-201ENST00000341290 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms