RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 TNRQ92752 1358 aa28.81■■■□□ 2.2
IFT27-201ENST00000340630 RSPH4AQ5TD94 716 aa28.81■■■□□ 2.2
IFT27-201ENST00000340630 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
IFT27-201ENST00000340630 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
IFT27-201ENST00000340630 CCDC141Q6ZP82 1450 aa28.79■■■□□ 2.2
IFT27-201ENST00000340630 NCOA2Q15596 1464 aa28.78■■■□□ 2.2
IFT27-201ENST00000340630 CAMSAP2Q08AD1 1489 aa28.77■■■□□ 2.2
IFT27-201ENST00000340630 TSPY4P0CV99 314 aa28.74■■■□□ 2.19
IFT27-201ENST00000340630 TSPY10P0CW01 314 aa28.74■■■□□ 2.19
IFT27-201ENST00000340630 PZPP20742 1482 aa28.73■■■□□ 2.19
IFT27-201ENST00000340630 KDM5DQ9BY66 1539 aa28.73■■■□□ 2.19
IFT27-201ENST00000340630 SCAF1Q9H7N4 1312 aaKnown RBP28.72■■■□□ 2.19
IFT27-201ENST00000340630 ANKLE2Q86XL3 938 aa28.72■■■□□ 2.19
IFT27-201ENST00000340630 THEMISQ8N1K5 641 aaPredicted RBP28.71■■■□□ 2.19
IFT27-201ENST00000340630 PIP4K2BP78356 416 aa28.7■■■□□ 2.18
IFT27-201ENST00000340630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.7■■■□□ 2.18
IFT27-201ENST00000340630 MIA2Q96PC5 1412 aa28.69■■■□□ 2.18
IFT27-201ENST00000340630 TOM1O60784 492 aa28.67■■■□□ 2.18
IFT27-201ENST00000340630 SHANK2Q9UPX8 1470 aa28.66■■■□□ 2.18
IFT27-201ENST00000340630 FAM135AQ9P2D6 1515 aa28.66■■■□□ 2.18
IFT27-201ENST00000340630 NEURL4Q96JN8 1562 aa28.66■■■□□ 2.18
IFT27-201ENST00000340630 HSPA1LP34931 641 aa28.65■■■□□ 2.18
IFT27-201ENST00000340630 CPS1P31327 1500 aa28.63■■■□□ 2.17
IFT27-201ENST00000340630 NLRP1Q9C000 1473 aa28.62■■■□□ 2.17
IFT27-201ENST00000340630 POLR1AO95602 1720 aaPredicted RBP28.62■■■□□ 2.17
IFT27-201ENST00000340630 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
IFT27-201ENST00000340630 UGGT1Q9NYU2 1555 aa28.6■■■□□ 2.17
IFT27-201ENST00000340630 NPHP4O75161 1426 aaPredicted RBP28.59■■■□□ 2.17
IFT27-201ENST00000340630 LRRC9Q6ZRR7 1453 aa28.56■■■□□ 2.16
IFT27-201ENST00000340630 VWDEQ8N2E2 1590 aa28.54■■■□□ 2.16
IFT27-201ENST00000340630 MED14O60244 1454 aa28.53■■■□□ 2.16
IFT27-201ENST00000340630 LOC105371045A0A1W2PR82 267 aa28.52■■■□□ 2.16
IFT27-201ENST00000340630 KANK4Q5T7N3 995 aaPredicted RBP28.52■■■□□ 2.16
IFT27-201ENST00000340630 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
IFT27-201ENST00000340630 ABCC3O15438 1527 aa28.51■■■□□ 2.15
IFT27-201ENST00000340630 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
IFT27-201ENST00000340630 RNF17Q9BXT8 1623 aaKnown RBP28.48■■■□□ 2.15
IFT27-201ENST00000340630 MAST1Q9Y2H9 1570 aa28.47■■■□□ 2.15
IFT27-201ENST00000340630 ERVK-7P63135 1459 aa28.46■■■□□ 2.15
IFT27-201ENST00000340630 MED1Q15648 1581 aaPredicted RBP28.44■■■□□ 2.14
IFT27-201ENST00000340630 IQGAP1P46940 1657 aa28.43■■■□□ 2.14
IFT27-201ENST00000340630 SENP3Q9H4L4 574 aaPredicted RBP28.43■■■□□ 2.14
IFT27-201ENST00000340630 MYOM3Q5VTT5 1437 aa28.42■■■□□ 2.14
IFT27-201ENST00000340630 ZC3H13Q5T200 1668 aaKnown RBP28.42■■■□□ 2.14
IFT27-201ENST00000340630 EIF2AK4Q9P2K8 1649 aaKnown RBP28.4■■■□□ 2.14
IFT27-201ENST00000340630 MROH1Q8NDA8 1641 aa28.39■■■□□ 2.13
IFT27-201ENST00000340630 ALKQ9UM73 1620 aa28.39■■■□□ 2.13
IFT27-201ENST00000340630 LRRC7Q96NW7 1537 aa28.38■■■□□ 2.13
IFT27-201ENST00000340630 TXNDC2Q86VQ3 553 aa28.37■■■□□ 2.13
IFT27-201ENST00000340630 PHF23Q9BUL5 403 aaPredicted RBP28.37■■■□□ 2.13
IFT27-201ENST00000340630 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
IFT27-201ENST00000340630 DUOX2Q9NRD8 1548 aa28.37■■■□□ 2.13
IFT27-201ENST00000340630 LTKP29376 864 aa28.36■■■□□ 2.13
IFT27-201ENST00000340630 MAP3K1Q13233 1512 aa28.36■■■□□ 2.13
IFT27-201ENST00000340630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.13
IFT27-201ENST00000340630 KIF15Q9NS87 1388 aa28.35■■■□□ 2.13
IFT27-201ENST00000340630 CEP152O94986 1710 aa28.34■■■□□ 2.13
IFT27-201ENST00000340630 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
IFT27-201ENST00000340630 SCAF11Q99590 1463 aaKnown RBP28.34■■■□□ 2.13
IFT27-201ENST00000340630 CFAP65Q6ZU64 1925 aaKnown RBP28.33■■■□□ 2.13
IFT27-201ENST00000340630 UBR1Q8IWV7 1749 aa28.31■■■□□ 2.12
IFT27-201ENST00000340630 EID1Q9Y6B2 187 aa28.3■■■□□ 2.12
IFT27-201ENST00000340630 ABCC5O15440 1437 aa28.29■■■□□ 2.12
IFT27-201ENST00000340630 ARHGAP31Q2M1Z3 1444 aa28.29■■■□□ 2.12
IFT27-201ENST00000340630 STAG3Q9UJ98 1225 aa28.27■■■□□ 2.12
IFT27-201ENST00000340630 SYNMO15061 1565 aa28.27■■■□□ 2.12
IFT27-201ENST00000340630 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
IFT27-201ENST00000340630 ERBINQ96RT1 1412 aa28.26■■■□□ 2.12
IFT27-201ENST00000340630 APLP2Q06481 763 aa28.26■■■□□ 2.11
IFT27-201ENST00000340630 SLIT1O75093 1534 aa28.25■■■□□ 2.11
IFT27-201ENST00000340630 PRDM15P57071 1507 aaPredicted RBP28.24■■■□□ 2.11
IFT27-201ENST00000340630 KANK1Q14678 1352 aa28.23■■■□□ 2.11
IFT27-201ENST00000340630 CHIC2Q9UKJ5 165 aa28.22■■■□□ 2.11
IFT27-201ENST00000340630 TMEM2Q9UHN6 1383 aa28.21■■■□□ 2.11
IFT27-201ENST00000340630 DAPK1P53355 1430 aa28.19■■■□□ 2.1
IFT27-201ENST00000340630 PTPN23Q9H3S7 1636 aa28.19■■■□□ 2.1
IFT27-201ENST00000340630 IDI1Q13907 227 aa28.19■■■□□ 2.1
IFT27-201ENST00000340630 PIK3C2BO00750 1634 aa28.16■■■□□ 2.1
IFT27-201ENST00000340630 CROCC2H7BZ55 1655 aa28.15■■■□□ 2.1
IFT27-201ENST00000340630 ANKRD30AQ9BXX3 1397 aa28.14■■■□□ 2.1
IFT27-201ENST00000340630 FGD6Q6ZV73 1430 aa28.13■■■□□ 2.09
IFT27-201ENST00000340630 SLC26A8Q96RN1 970 aa28.13■■■□□ 2.09
IFT27-201ENST00000340630 KCNA6P17658 529 aa28.11■■■□□ 2.09
IFT27-201ENST00000340630 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
IFT27-201ENST00000340630 EFCAB6Q5THR3 1501 aa28.1■■■□□ 2.09
IFT27-201ENST00000340630 PROSER2Q86WR7 435 aaPredicted RBP28.09■■■□□ 2.09
IFT27-201ENST00000340630 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
IFT27-201ENST00000340630 RGS17Q9UGC6 210 aaPredicted RBP28.09■■■□□ 2.09
IFT27-201ENST00000340630 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.09
IFT27-201ENST00000340630 FAM135BQ49AJ0 1406 aa28.08■■■□□ 2.09
IFT27-201ENST00000340630 XIRP1Q702N8 1843 aaKnown RBP28.07■■■□□ 2.08
IFT27-201ENST00000340630 BCANQ96GW7 911 aa28.06■■■□□ 2.08
IFT27-201ENST00000340630 NOS1P29475 1434 aa28.03■■■□□ 2.08
IFT27-201ENST00000340630 SLC52A1Q9NWF4 448 aa28.03■■■□□ 2.08
IFT27-201ENST00000340630 TET3O43151 1660 aa28.01■■■□□ 2.07
IFT27-201ENST00000340630 KDM5AP29375 1690 aaKnown RBP28■■■□□ 2.07
IFT27-201ENST00000340630 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
IFT27-201ENST00000340630 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
IFT27-201ENST00000340630 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
IFT27-201ENST00000340630 PPP1R15AO75807 674 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms