RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 NCOA2Q15596 1464 aa22.1■■□□□ 1.13
UPK3BL1-201ENST00000340457 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
UPK3BL1-201ENST00000340457 CAMSAP2Q08AD1 1489 aa22.09■■□□□ 1.13
UPK3BL1-201ENST00000340457 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
UPK3BL1-201ENST00000340457 TNRQ92752 1358 aa22.08■■□□□ 1.13
UPK3BL1-201ENST00000340457 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
UPK3BL1-201ENST00000340457 KDM5DQ9BY66 1539 aa22.04■■□□□ 1.12
UPK3BL1-201ENST00000340457 PZPP20742 1482 aa22.03■■□□□ 1.12
UPK3BL1-201ENST00000340457 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
UPK3BL1-201ENST00000340457 NEURL4Q96JN8 1562 aa22.01■■□□□ 1.11
UPK3BL1-201ENST00000340457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.01■■□□□ 1.11
UPK3BL1-201ENST00000340457 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
UPK3BL1-201ENST00000340457 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
UPK3BL1-201ENST00000340457 TSPY4P0CV99 314 aa22■■□□□ 1.11
UPK3BL1-201ENST00000340457 TSPY10P0CW01 314 aa22■■□□□ 1.11
UPK3BL1-201ENST00000340457 PIP4K2BP78356 416 aa22■■□□□ 1.11
UPK3BL1-201ENST00000340457 MIA2Q96PC5 1412 aa21.98■■□□□ 1.11
UPK3BL1-201ENST00000340457 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
UPK3BL1-201ENST00000340457 ARHGEF5Q12774 1597 aa21.96■■□□□ 1.11
UPK3BL1-201ENST00000340457 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
UPK3BL1-201ENST00000340457 HSPA1LP34931 641 aa21.96■■□□□ 1.11
UPK3BL1-201ENST00000340457 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
UPK3BL1-201ENST00000340457 FAM135AQ9P2D6 1515 aa21.95■■□□□ 1.1
UPK3BL1-201ENST00000340457 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
UPK3BL1-201ENST00000340457 UGGT1Q9NYU2 1555 aa21.94■■□□□ 1.1
UPK3BL1-201ENST00000340457 NLRP1Q9C000 1473 aa21.93■■□□□ 1.1
UPK3BL1-201ENST00000340457 CPS1P31327 1500 aa21.92■■□□□ 1.1
UPK3BL1-201ENST00000340457 TOM1O60784 492 aa21.92■■□□□ 1.1
UPK3BL1-201ENST00000340457 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
UPK3BL1-201ENST00000340457 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
UPK3BL1-201ENST00000340457 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
UPK3BL1-201ENST00000340457 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
UPK3BL1-201ENST00000340457 ABCC3O15438 1527 aa21.89■■□□□ 1.09
UPK3BL1-201ENST00000340457 CFAP65Q6ZU64 1925 aaKnown RBP21.89■■□□□ 1.09
UPK3BL1-201ENST00000340457 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.09
UPK3BL1-201ENST00000340457 RNF17Q9BXT8 1623 aaKnown RBP21.87■■□□□ 1.09
UPK3BL1-201ENST00000340457 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
UPK3BL1-201ENST00000340457 MED14O60244 1454 aa21.86■■□□□ 1.09
UPK3BL1-201ENST00000340457 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
UPK3BL1-201ENST00000340457 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
UPK3BL1-201ENST00000340457 IQGAP1P46940 1657 aa21.83■■□□□ 1.09
UPK3BL1-201ENST00000340457 ERVK-7P63135 1459 aa21.83■■□□□ 1.09
UPK3BL1-201ENST00000340457 MROH1Q8NDA8 1641 aa21.83■■□□□ 1.08
UPK3BL1-201ENST00000340457 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.08
UPK3BL1-201ENST00000340457 CEP152O94986 1710 aa21.82■■□□□ 1.08
UPK3BL1-201ENST00000340457 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
UPK3BL1-201ENST00000340457 ZC3H13Q5T200 1668 aaKnown RBP21.81■■□□□ 1.08
UPK3BL1-201ENST00000340457 ALKQ9UM73 1620 aa21.81■■□□□ 1.08
UPK3BL1-201ENST00000340457 STRCP1A6NGW2 1772 aa21.81■■□□□ 1.08
UPK3BL1-201ENST00000340457 EIF2AK4Q9P2K8 1649 aaKnown RBP21.8■■□□□ 1.08
UPK3BL1-201ENST00000340457 LRRC7Q96NW7 1537 aa21.77■■□□□ 1.08
UPK3BL1-201ENST00000340457 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.07
UPK3BL1-201ENST00000340457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.07
UPK3BL1-201ENST00000340457 DUOX2Q9NRD8 1548 aa21.75■■□□□ 1.07
UPK3BL1-201ENST00000340457 UBR1Q8IWV7 1749 aa21.75■■□□□ 1.07
UPK3BL1-201ENST00000340457 LTKP29376 864 aa21.75■■□□□ 1.07
UPK3BL1-201ENST00000340457 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
UPK3BL1-201ENST00000340457 MAP3K1Q13233 1512 aa21.74■■□□□ 1.07
UPK3BL1-201ENST00000340457 TXNDC2Q86VQ3 553 aa21.73■■□□□ 1.07
UPK3BL1-201ENST00000340457 SCAF11Q99590 1463 aaKnown RBP21.72■■□□□ 1.07
UPK3BL1-201ENST00000340457 ABCC5O15440 1437 aa21.71■■□□□ 1.07
UPK3BL1-201ENST00000340457 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
UPK3BL1-201ENST00000340457 PRDM15P57071 1507 aaPredicted RBP21.68■■□□□ 1.06
UPK3BL1-201ENST00000340457 SYNMO15061 1565 aa21.68■■□□□ 1.06
UPK3BL1-201ENST00000340457 PTPN23Q9H3S7 1636 aa21.68■■□□□ 1.06
UPK3BL1-201ENST00000340457 CROCC2H7BZ55 1655 aa21.67■■□□□ 1.06
UPK3BL1-201ENST00000340457 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
UPK3BL1-201ENST00000340457 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
UPK3BL1-201ENST00000340457 ARHGAP31Q2M1Z3 1444 aa21.66■■□□□ 1.06
UPK3BL1-201ENST00000340457 ERBINQ96RT1 1412 aa21.66■■□□□ 1.06
UPK3BL1-201ENST00000340457 SLIT1O75093 1534 aa21.66■■□□□ 1.06
UPK3BL1-201ENST00000340457 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
UPK3BL1-201ENST00000340457 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
UPK3BL1-201ENST00000340457 PIK3C2BO00750 1634 aa21.65■■□□□ 1.06
UPK3BL1-201ENST00000340457 DAPK1P53355 1430 aa21.64■■□□□ 1.06
UPK3BL1-201ENST00000340457 APLP2Q06481 763 aa21.64■■□□□ 1.05
UPK3BL1-201ENST00000340457 KANK1Q14678 1352 aa21.62■■□□□ 1.05
UPK3BL1-201ENST00000340457 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
UPK3BL1-201ENST00000340457 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
UPK3BL1-201ENST00000340457 IDI1Q13907 227 aa21.6■■□□□ 1.05
UPK3BL1-201ENST00000340457 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
UPK3BL1-201ENST00000340457 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.05
UPK3BL1-201ENST00000340457 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
UPK3BL1-201ENST00000340457 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
UPK3BL1-201ENST00000340457 EFCAB6Q5THR3 1501 aa21.56■■□□□ 1.04
UPK3BL1-201ENST00000340457 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
UPK3BL1-201ENST00000340457 LMTK2Q8IWU2 1503 aa21.53■■□□□ 1.04
UPK3BL1-201ENST00000340457 RGS17Q9UGC6 210 aaPredicted RBP21.53■■□□□ 1.04
UPK3BL1-201ENST00000340457 KCNA6P17658 529 aa21.52■■□□□ 1.03
UPK3BL1-201ENST00000340457 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.03
UPK3BL1-201ENST00000340457 BCANQ96GW7 911 aa21.51■■□□□ 1.03
UPK3BL1-201ENST00000340457 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
UPK3BL1-201ENST00000340457 TET3O43151 1660 aa21.49■■□□□ 1.03
UPK3BL1-201ENST00000340457 NOS1P29475 1434 aa21.49■■□□□ 1.03
UPK3BL1-201ENST00000340457 KDM5AP29375 1690 aaKnown RBP21.48■■□□□ 1.03
UPK3BL1-201ENST00000340457 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
UPK3BL1-201ENST00000340457 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
UPK3BL1-201ENST00000340457 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
UPK3BL1-201ENST00000340457 SLC52A1Q9NWF4 448 aa21.44■■□□□ 1.02
UPK3BL1-201ENST00000340457 ADGRL2O95490 1459 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms