RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CROCC2H7BZ55 1655 aa20.71■□□□□ 0.91
SIRPB3P-201ENST00000340424 KIF3BO15066 747 aa20.7■□□□□ 0.9
SIRPB3P-201ENST00000340424 DNMT1P26358 1616 aaKnown RBP20.7■□□□□ 0.9
SIRPB3P-201ENST00000340424 EIF2AK4Q9P2K8 1649 aaKnown RBP20.7■□□□□ 0.9
SIRPB3P-201ENST00000340424 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
SIRPB3P-201ENST00000340424 ABCC5O15440 1437 aa20.68■□□□□ 0.9
SIRPB3P-201ENST00000340424 DAPK1P53355 1430 aa20.68■□□□□ 0.9
SIRPB3P-201ENST00000340424 DUOX2Q9NRD8 1548 aa20.68■□□□□ 0.9
SIRPB3P-201ENST00000340424 HSPA2P54652 639 aa20.67■□□□□ 0.9
SIRPB3P-201ENST00000340424 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
SIRPB3P-201ENST00000340424 PTPRKQ15262 1439 aa20.64■□□□□ 0.89
SIRPB3P-201ENST00000340424 ERBINQ96RT1 1412 aa20.62■□□□□ 0.89
SIRPB3P-201ENST00000340424 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
SIRPB3P-201ENST00000340424 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
SIRPB3P-201ENST00000340424 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
SIRPB3P-201ENST00000340424 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
SIRPB3P-201ENST00000340424 PZPP20742 1482 aa20.6■□□□□ 0.89
SIRPB3P-201ENST00000340424 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
SIRPB3P-201ENST00000340424 ZNF142P52746 1687 aaPredicted RBP20.59■□□□□ 0.89
SIRPB3P-201ENST00000340424 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
SIRPB3P-201ENST00000340424 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
SIRPB3P-201ENST00000340424 ADGRL2O95490 1459 aa20.56■□□□□ 0.88
SIRPB3P-201ENST00000340424 ABCC3O15438 1527 aa20.56■□□□□ 0.88
SIRPB3P-201ENST00000340424 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
SIRPB3P-201ENST00000340424 STRCQ7RTU9 1775 aa20.55■□□□□ 0.88
SIRPB3P-201ENST00000340424 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
SIRPB3P-201ENST00000340424 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
SIRPB3P-201ENST00000340424 MROH1Q8NDA8 1641 aa20.55■□□□□ 0.88
SIRPB3P-201ENST00000340424 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
SIRPB3P-201ENST00000340424 PRDM15P57071 1507 aaPredicted RBP20.54■□□□□ 0.88
SIRPB3P-201ENST00000340424 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
SIRPB3P-201ENST00000340424 TNRQ92752 1358 aa20.52■□□□□ 0.88
SIRPB3P-201ENST00000340424 A2ML1A8K2U0 1454 aa20.51■□□□□ 0.87
SIRPB3P-201ENST00000340424 PLA2R1Q13018 1463 aa20.51■□□□□ 0.87
SIRPB3P-201ENST00000340424 KCNA4P22459 653 aa20.51■□□□□ 0.87
SIRPB3P-201ENST00000340424 CAMSAP1Q5T5Y3 1602 aa20.51■□□□□ 0.87
SIRPB3P-201ENST00000340424 PTPRTO14522 1441 aa20.51■□□□□ 0.87
SIRPB3P-201ENST00000340424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
SIRPB3P-201ENST00000340424 CHIC2Q9UKJ5 165 aa20.49■□□□□ 0.87
SIRPB3P-201ENST00000340424 NLRP1Q9C000 1473 aa20.49■□□□□ 0.87
SIRPB3P-201ENST00000340424 KANK1Q14678 1352 aa20.48■□□□□ 0.87
SIRPB3P-201ENST00000340424 SPATA31D1Q6ZQQ2 1576 aa20.47■□□□□ 0.87
SIRPB3P-201ENST00000340424 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
SIRPB3P-201ENST00000340424 CEP152O94986 1710 aa20.47■□□□□ 0.87
SIRPB3P-201ENST00000340424 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
SIRPB3P-201ENST00000340424 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
SIRPB3P-201ENST00000340424 PKD2Q13563 968 aa20.44■□□□□ 0.86
SIRPB3P-201ENST00000340424 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
SIRPB3P-201ENST00000340424 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
SIRPB3P-201ENST00000340424 LMTK2Q8IWU2 1503 aa20.43■□□□□ 0.86
SIRPB3P-201ENST00000340424 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
SIRPB3P-201ENST00000340424 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
SIRPB3P-201ENST00000340424 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
SIRPB3P-201ENST00000340424 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.85
SIRPB3P-201ENST00000340424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
SIRPB3P-201ENST00000340424 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
SIRPB3P-201ENST00000340424 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
SIRPB3P-201ENST00000340424 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
SIRPB3P-201ENST00000340424 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
SIRPB3P-201ENST00000340424 NCKAP5LQ9HCH0 1330 aa20.36■□□□□ 0.85
SIRPB3P-201ENST00000340424 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
SIRPB3P-201ENST00000340424 CERKQ8TCT0 537 aa20.35■□□□□ 0.85
SIRPB3P-201ENST00000340424 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
SIRPB3P-201ENST00000340424 UNC13BO14795 1591 aa20.34■□□□□ 0.85
SIRPB3P-201ENST00000340424 RPRD2Q5VT52 1461 aaKnown RBP20.33■□□□□ 0.85
SIRPB3P-201ENST00000340424 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
SIRPB3P-201ENST00000340424 CFAP65Q6ZU64 1925 aaKnown RBP20.3■□□□□ 0.84
SIRPB3P-201ENST00000340424 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
SIRPB3P-201ENST00000340424 TET3O43151 1660 aa20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 KDM5AP29375 1690 aaKnown RBP20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 LTBP4Q8N2S1 1624 aa20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 MED14O60244 1454 aa20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
SIRPB3P-201ENST00000340424 ITGAEP38570 1179 aa20.28■□□□□ 0.84
SIRPB3P-201ENST00000340424 NOS1P29475 1434 aa20.27■□□□□ 0.84
SIRPB3P-201ENST00000340424 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
SIRPB3P-201ENST00000340424 IQGAP3Q86VI3 1631 aa20.25■□□□□ 0.83
SIRPB3P-201ENST00000340424 SLIT1O75093 1534 aa20.24■□□□□ 0.83
SIRPB3P-201ENST00000340424 SLC52A1Q9NWF4 448 aa20.24■□□□□ 0.83
SIRPB3P-201ENST00000340424 SYNMO15061 1565 aa20.24■□□□□ 0.83
SIRPB3P-201ENST00000340424 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
SIRPB3P-201ENST00000340424 NPHP4O75161 1426 aaPredicted RBP20.23■□□□□ 0.83
SIRPB3P-201ENST00000340424 ARHGAP23Q9P227 1491 aa20.23■□□□□ 0.83
SIRPB3P-201ENST00000340424 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
SIRPB3P-201ENST00000340424 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
SIRPB3P-201ENST00000340424 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
SIRPB3P-201ENST00000340424 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
SIRPB3P-201ENST00000340424 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
SIRPB3P-201ENST00000340424 NUP155O75694 1391 aa20.2■□□□□ 0.82
SIRPB3P-201ENST00000340424 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
SIRPB3P-201ENST00000340424 IDI1Q13907 227 aa20.19■□□□□ 0.82
SIRPB3P-201ENST00000340424 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
SIRPB3P-201ENST00000340424 TMEM2Q9UHN6 1383 aa20.18■□□□□ 0.82
SIRPB3P-201ENST00000340424 CPS1P31327 1500 aa20.17■□□□□ 0.82
SIRPB3P-201ENST00000340424 E9PCH4 1651 aa20.17■□□□□ 0.82
SIRPB3P-201ENST00000340424 NAIPQ13075 1403 aa20.17■□□□□ 0.82
SIRPB3P-201ENST00000340424 HFM1A2PYH4 1435 aa20.16■□□□□ 0.82
SIRPB3P-201ENST00000340424 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
SIRPB3P-201ENST00000340424 TXNDC2Q86VQ3 553 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms