RNA–Protein interactions for RNA: ENST00000339677.10

POLDIP3-202, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-202ENST00000339677 TNRQ92752 1358 aa24.29■■□□□ 1.48
POLDIP3-202ENST00000339677 ZNF142P52746 1687 aaPredicted RBP24.28■■□□□ 1.48
POLDIP3-202ENST00000339677 NCOA2Q15596 1464 aa24.28■■□□□ 1.48
POLDIP3-202ENST00000339677 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
POLDIP3-202ENST00000339677 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
POLDIP3-202ENST00000339677 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
POLDIP3-202ENST00000339677 DNMT1P26358 1616 aaKnown RBP24.26■■□□□ 1.47
POLDIP3-202ENST00000339677 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
POLDIP3-202ENST00000339677 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
POLDIP3-202ENST00000339677 THEMISQ8N1K5 641 aaPredicted RBP24.24■■□□□ 1.47
POLDIP3-202ENST00000339677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
POLDIP3-202ENST00000339677 CAMSAP2Q08AD1 1489 aa24.24■■□□□ 1.47
POLDIP3-202ENST00000339677 PIP4K2BP78356 416 aa24.23■■□□□ 1.47
POLDIP3-202ENST00000339677 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
POLDIP3-202ENST00000339677 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
POLDIP3-202ENST00000339677 PZPP20742 1482 aa24.21■■□□□ 1.47
POLDIP3-202ENST00000339677 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
POLDIP3-202ENST00000339677 HSPA1LP34931 641 aa24.2■■□□□ 1.46
POLDIP3-202ENST00000339677 TOM1O60784 492 aa24.18■■□□□ 1.46
POLDIP3-202ENST00000339677 KDM5DQ9BY66 1539 aa24.17■■□□□ 1.46
POLDIP3-202ENST00000339677 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
POLDIP3-202ENST00000339677 SHANK2Q9UPX8 1470 aa24.16■■□□□ 1.46
POLDIP3-202ENST00000339677 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.45
POLDIP3-202ENST00000339677 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
POLDIP3-202ENST00000339677 LRRC9Q6ZRR7 1453 aa24.1■■□□□ 1.45
POLDIP3-202ENST00000339677 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
POLDIP3-202ENST00000339677 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
POLDIP3-202ENST00000339677 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
POLDIP3-202ENST00000339677 UGGT1Q9NYU2 1555 aa24.09■■□□□ 1.45
POLDIP3-202ENST00000339677 CPS1P31327 1500 aa24.09■■□□□ 1.45
POLDIP3-202ENST00000339677 MED14O60244 1454 aa24.07■■□□□ 1.44
POLDIP3-202ENST00000339677 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
POLDIP3-202ENST00000339677 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
POLDIP3-202ENST00000339677 POLR1AO95602 1720 aaPredicted RBP24.03■■□□□ 1.44
POLDIP3-202ENST00000339677 ABCC3O15438 1527 aa24.03■■□□□ 1.44
POLDIP3-202ENST00000339677 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
POLDIP3-202ENST00000339677 LTKP29376 864 aa23.99■■□□□ 1.43
POLDIP3-202ENST00000339677 ERVK-7P63135 1459 aa23.99■■□□□ 1.43
POLDIP3-202ENST00000339677 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
POLDIP3-202ENST00000339677 DEPDC5O75140 1603 aa23.97■■□□□ 1.43
POLDIP3-202ENST00000339677 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
POLDIP3-202ENST00000339677 TXNDC2Q86VQ3 553 aa23.97■■□□□ 1.43
POLDIP3-202ENST00000339677 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
POLDIP3-202ENST00000339677 RNF17Q9BXT8 1623 aaKnown RBP23.96■■□□□ 1.43
POLDIP3-202ENST00000339677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.438e-9■□□□□ 9.1
POLDIP3-202ENST00000339677 ALKQ9UM73 1620 aa23.95■■□□□ 1.43
POLDIP3-202ENST00000339677 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
POLDIP3-202ENST00000339677 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
POLDIP3-202ENST00000339677 MED1Q15648 1581 aaPredicted RBP23.91■■□□□ 1.42
POLDIP3-202ENST00000339677 MAP3K1Q13233 1512 aa23.91■■□□□ 1.42
POLDIP3-202ENST00000339677 IQGAP1P46940 1657 aa23.91■■□□□ 1.42
POLDIP3-202ENST00000339677 ABCC5O15440 1437 aa23.91■■□□□ 1.42
POLDIP3-202ENST00000339677 KIF15Q9NS87 1388 aa23.91■■□□□ 1.42
POLDIP3-202ENST00000339677 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.42
POLDIP3-202ENST00000339677 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
POLDIP3-202ENST00000339677 PHF23Q9BUL5 403 aaPredicted RBP23.88■■□□□ 1.41
POLDIP3-202ENST00000339677 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
POLDIP3-202ENST00000339677 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
POLDIP3-202ENST00000339677 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
POLDIP3-202ENST00000339677 ZC3H13Q5T200 1668 aaKnown RBP23.87■■□□□ 1.41
POLDIP3-202ENST00000339677 CFAP65Q6ZU64 1925 aaKnown RBP23.87■■□□□ 1.41
POLDIP3-202ENST00000339677 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
POLDIP3-202ENST00000339677 ARHGAP31Q2M1Z3 1444 aa23.86■■□□□ 1.41
POLDIP3-202ENST00000339677 APLP2Q06481 763 aa23.85■■□□□ 1.41
POLDIP3-202ENST00000339677 STAG3Q9UJ98 1225 aa23.85■■□□□ 1.41
POLDIP3-202ENST00000339677 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
POLDIP3-202ENST00000339677 IDI1Q13907 227 aa23.84■■□□□ 1.41
POLDIP3-202ENST00000339677 CEP152O94986 1710 aa23.83■■□□□ 1.41
POLDIP3-202ENST00000339677 UBR1Q8IWV7 1749 aa23.82■■□□□ 1.4
POLDIP3-202ENST00000339677 ERBINQ96RT1 1412 aa23.81■■□□□ 1.4
POLDIP3-202ENST00000339677 TMEM2Q9UHN6 1383 aa23.8■■□□□ 1.4
POLDIP3-202ENST00000339677 SLIT1O75093 1534 aa23.8■■□□□ 1.4
POLDIP3-202ENST00000339677 DAPK1P53355 1430 aa23.79■■□□□ 1.4
POLDIP3-202ENST00000339677 KANK1Q14678 1352 aa23.78■■□□□ 1.4
POLDIP3-202ENST00000339677 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
POLDIP3-202ENST00000339677 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
POLDIP3-202ENST00000339677 RGS17Q9UGC6 210 aaPredicted RBP23.77■■□□□ 1.4
POLDIP3-202ENST00000339677 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.4
POLDIP3-202ENST00000339677 KCNA6P17658 529 aa23.75■■□□□ 1.39
POLDIP3-202ENST00000339677 PTPN23Q9H3S7 1636 aa23.74■■□□□ 1.39
POLDIP3-202ENST00000339677 ANKRD30AQ9BXX3 1397 aa23.74■■□□□ 1.39
POLDIP3-202ENST00000339677 FGD6Q6ZV73 1430 aa23.74■■□□□ 1.39
POLDIP3-202ENST00000339677 SYNMO15061 1565 aa23.73■■□□□ 1.39
POLDIP3-202ENST00000339677 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
POLDIP3-202ENST00000339677 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
POLDIP3-202ENST00000339677 PIK3C2BO00750 1634 aa23.71■■□□□ 1.39
POLDIP3-202ENST00000339677 FAM135BQ49AJ0 1406 aa23.68■■□□□ 1.38
POLDIP3-202ENST00000339677 BCANQ96GW7 911 aa23.68■■□□□ 1.38
POLDIP3-202ENST00000339677 SLC52A1Q9NWF4 448 aa23.67■■□□□ 1.38
POLDIP3-202ENST00000339677 EFCAB6Q5THR3 1501 aa23.67■■□□□ 1.38
POLDIP3-202ENST00000339677 NOS1P29475 1434 aa23.67■■□□□ 1.38
POLDIP3-202ENST00000339677 LMTK2Q8IWU2 1503 aa23.66■■□□□ 1.38
POLDIP3-202ENST00000339677 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
POLDIP3-202ENST00000339677 CROCC2H7BZ55 1655 aa23.66■■□□□ 1.38
POLDIP3-202ENST00000339677 TET3O43151 1660 aa23.64■■□□□ 1.37
POLDIP3-202ENST00000339677 XIRP1Q702N8 1843 aaKnown RBP23.63■■□□□ 1.37
POLDIP3-202ENST00000339677 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
POLDIP3-202ENST00000339677 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
POLDIP3-202ENST00000339677 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
POLDIP3-202ENST00000339677 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms