RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
NUDCD3-201ENST00000338427 RRP7BPQ9NSQ0 103 aa20.93■□□□□ 0.94
NUDCD3-201ENST00000338427 CHIC2Q9UKJ5 165 aa20.91■□□□□ 0.94
NUDCD3-201ENST00000338427 ABCC5O15440 1437 aa20.89■□□□□ 0.94
NUDCD3-201ENST00000338427 TNRQ92752 1358 aa20.88■□□□□ 0.93
NUDCD3-201ENST00000338427 MYO3AQ8NEV4 1616 aa20.87■□□□□ 0.93
NUDCD3-201ENST00000338427 ZNF335Q9H4Z2 1342 aaPredicted RBP20.86■□□□□ 0.93
NUDCD3-201ENST00000338427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.86■□□□□ 0.931e-6■□□□□ 9.5
NUDCD3-201ENST00000338427 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
NUDCD3-201ENST00000338427 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
NUDCD3-201ENST00000338427 PKD2Q13563 968 aa20.85■□□□□ 0.93
NUDCD3-201ENST00000338427 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
NUDCD3-201ENST00000338427 PTPN23Q9H3S7 1636 aa20.84■□□□□ 0.93
NUDCD3-201ENST00000338427 A2ML1A8K2U0 1454 aa20.83■□□□□ 0.93
NUDCD3-201ENST00000338427 PZPP20742 1482 aa20.83■□□□□ 0.93
NUDCD3-201ENST00000338427 LTBP4Q8N2S1 1624 aa20.83■□□□□ 0.93
NUDCD3-201ENST00000338427 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
NUDCD3-201ENST00000338427 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
NUDCD3-201ENST00000338427 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
NUDCD3-201ENST00000338427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
NUDCD3-201ENST00000338427 KIF15Q9NS87 1388 aa20.81■□□□□ 0.92
NUDCD3-201ENST00000338427 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
NUDCD3-201ENST00000338427 DAPK1P53355 1430 aa20.8■□□□□ 0.92
NUDCD3-201ENST00000338427 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
NUDCD3-201ENST00000338427 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
NUDCD3-201ENST00000338427 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
NUDCD3-201ENST00000338427 ABCC3O15438 1527 aa20.78■□□□□ 0.92
NUDCD3-201ENST00000338427 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
NUDCD3-201ENST00000338427 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
NUDCD3-201ENST00000338427 DUOX2Q9NRD8 1548 aa20.77■□□□□ 0.92
NUDCD3-201ENST00000338427 MROH1Q8NDA8 1641 aa20.76■□□□□ 0.91
NUDCD3-201ENST00000338427 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
NUDCD3-201ENST00000338427 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
NUDCD3-201ENST00000338427 CEP152O94986 1710 aa20.73■□□□□ 0.91
NUDCD3-201ENST00000338427 FAM135AQ9P2D6 1515 aa20.72■□□□□ 0.91
NUDCD3-201ENST00000338427 SHANK2Q9UPX8 1470 aa20.71■□□□□ 0.91
NUDCD3-201ENST00000338427 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
NUDCD3-201ENST00000338427 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
NUDCD3-201ENST00000338427 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
NUDCD3-201ENST00000338427 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.9
NUDCD3-201ENST00000338427 UGGT1Q9NYU2 1555 aa20.69■□□□□ 0.9
NUDCD3-201ENST00000338427 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
NUDCD3-201ENST00000338427 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
NUDCD3-201ENST00000338427 ERBINQ96RT1 1412 aa20.68■□□□□ 0.9
NUDCD3-201ENST00000338427 SPATA31D1Q6ZQQ2 1576 aa20.68■□□□□ 0.9
NUDCD3-201ENST00000338427 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
NUDCD3-201ENST00000338427 LTKP29376 864 aa20.65■□□□□ 0.9
NUDCD3-201ENST00000338427 ITGAEP38570 1179 aa20.64■□□□□ 0.89
NUDCD3-201ENST00000338427 ZC3H13Q5T200 1668 aaKnown RBP20.64■□□□□ 0.89
NUDCD3-201ENST00000338427 NPHP4O75161 1426 aaPredicted RBP20.63■□□□□ 0.89
NUDCD3-201ENST00000338427 IDI1Q13907 227 aa20.63■□□□□ 0.89
NUDCD3-201ENST00000338427 KANK1Q14678 1352 aa20.62■□□□□ 0.89
NUDCD3-201ENST00000338427 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
NUDCD3-201ENST00000338427 ARHGAP31Q2M1Z3 1444 aa20.61■□□□□ 0.89
NUDCD3-201ENST00000338427 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
NUDCD3-201ENST00000338427 PRDM15P57071 1507 aaPredicted RBP20.6■□□□□ 0.89
NUDCD3-201ENST00000338427 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
NUDCD3-201ENST00000338427 MED14O60244 1454 aa20.58■□□□□ 0.89
NUDCD3-201ENST00000338427 ADGRL2O95490 1459 aa20.58■□□□□ 0.89
NUDCD3-201ENST00000338427 PIP4K2BP78356 416 aa20.58■□□□□ 0.89
NUDCD3-201ENST00000338427 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
NUDCD3-201ENST00000338427 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
NUDCD3-201ENST00000338427 DEPDC5O75140 1603 aa20.57■□□□□ 0.88
NUDCD3-201ENST00000338427 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
NUDCD3-201ENST00000338427 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
NUDCD3-201ENST00000338427 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
NUDCD3-201ENST00000338427 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
NUDCD3-201ENST00000338427 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
NUDCD3-201ENST00000338427 EID1Q9Y6B2 187 aa20.52■□□□□ 0.88
NUDCD3-201ENST00000338427 LMTK2Q8IWU2 1503 aa20.52■□□□□ 0.87
NUDCD3-201ENST00000338427 ILDR2Q71H61 639 aa20.51■□□□□ 0.87
NUDCD3-201ENST00000338427 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
NUDCD3-201ENST00000338427 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
NUDCD3-201ENST00000338427 ARHGAP23Q9P227 1491 aa20.5■□□□□ 0.87
NUDCD3-201ENST00000338427 STRCP1A6NGW2 1772 aa20.5■□□□□ 0.87
NUDCD3-201ENST00000338427 SCAF11Q99590 1463 aaKnown RBP20.5■□□□□ 0.87
NUDCD3-201ENST00000338427 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
NUDCD3-201ENST00000338427 TOM1O60784 492 aa20.49■□□□□ 0.87
NUDCD3-201ENST00000338427 HSPA1LP34931 641 aa20.49■□□□□ 0.87
NUDCD3-201ENST00000338427 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
NUDCD3-201ENST00000338427 NOS1P29475 1434 aa20.49■□□□□ 0.87
NUDCD3-201ENST00000338427 CPS1P31327 1500 aa20.48■□□□□ 0.87
NUDCD3-201ENST00000338427 SYNMO15061 1565 aa20.48■□□□□ 0.87
NUDCD3-201ENST00000338427 SLIT1O75093 1534 aa20.48■□□□□ 0.87
NUDCD3-201ENST00000338427 SLC52A1Q9NWF4 448 aa20.46■□□□□ 0.87
NUDCD3-201ENST00000338427 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
NUDCD3-201ENST00000338427 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
NUDCD3-201ENST00000338427 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
NUDCD3-201ENST00000338427 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
NUDCD3-201ENST00000338427 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
NUDCD3-201ENST00000338427 BCANQ96GW7 911 aa20.43■□□□□ 0.86
NUDCD3-201ENST00000338427 ROCK1Q13464 1354 aa20.43■□□□□ 0.86
NUDCD3-201ENST00000338427 NUP155O75694 1391 aa20.41■□□□□ 0.86
NUDCD3-201ENST00000338427 ALKQ9UM73 1620 aa20.4■□□□□ 0.86
NUDCD3-201ENST00000338427 KCNA6P17658 529 aa20.37■□□□□ 0.85
NUDCD3-201ENST00000338427 TET3O43151 1660 aa20.36■□□□□ 0.85
NUDCD3-201ENST00000338427 PROSER2Q86WR7 435 aaPredicted RBP20.36■□□□□ 0.85
NUDCD3-201ENST00000338427 UNC13BO14795 1591 aa20.35■□□□□ 0.85
NUDCD3-201ENST00000338427 RPRD2Q5VT52 1461 aaKnown RBP20.35■□□□□ 0.85
NUDCD3-201ENST00000338427 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms