RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A2MP01023 1474 aa21.5■■□□□ 1.03
CDK5RAP3-201ENST00000338399 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
CDK5RAP3-201ENST00000338399 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
CDK5RAP3-201ENST00000338399 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
CDK5RAP3-201ENST00000338399 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
CDK5RAP3-201ENST00000338399 PKD2Q13563 968 aa21.47■■□□□ 1.03
CDK5RAP3-201ENST00000338399 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
CDK5RAP3-201ENST00000338399 COL17A1Q9UMD9 1497 aaPredicted RBP21.47■■□□□ 1.03
CDK5RAP3-201ENST00000338399 KIF3BO15066 747 aa21.47■■□□□ 1.03
CDK5RAP3-201ENST00000338399 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
CDK5RAP3-201ENST00000338399 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
CDK5RAP3-201ENST00000338399 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
CDK5RAP3-201ENST00000338399 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
CDK5RAP3-201ENST00000338399 MROH1Q8NDA8 1641 aa21.39■■□□□ 1.02
CDK5RAP3-201ENST00000338399 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
CDK5RAP3-201ENST00000338399 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-201ENST00000338399 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP3-201ENST00000338399 KANK1Q14678 1352 aa21.38■■□□□ 1.01
CDK5RAP3-201ENST00000338399 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
CDK5RAP3-201ENST00000338399 ATP10AO60312 1499 aa21.36■■□□□ 1.01
CDK5RAP3-201ENST00000338399 TIMELESSQ9UNS1 1208 aa21.36■■□□□ 1.01
CDK5RAP3-201ENST00000338399 TONSLQ96HA7 1378 aa21.35■■□□□ 1.01
CDK5RAP3-201ENST00000338399 GGT6Q6P531 493 aa21.34■■□□□ 1.01
CDK5RAP3-201ENST00000338399 RPRD2Q5VT52 1461 aaKnown RBP21.33■■□□□ 1
CDK5RAP3-201ENST00000338399 TET3O43151 1660 aa21.32■■□□□ 1
CDK5RAP3-201ENST00000338399 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
CDK5RAP3-201ENST00000338399 E9PCH4 1651 aa21.31■■□□□ 1
CDK5RAP3-201ENST00000338399 CEP152O94986 1710 aa21.31■■□□□ 1
CDK5RAP3-201ENST00000338399 REREQ9P2R6 1566 aa21.3■■□□□ 1
CDK5RAP3-201ENST00000338399 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
CDK5RAP3-201ENST00000338399 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
CDK5RAP3-201ENST00000338399 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
CDK5RAP3-201ENST00000338399 SIGLEC1Q9BZZ2 1709 aa21.26■□□□□ 0.99
CDK5RAP3-201ENST00000338399 AGLP35573 1532 aa21.25■□□□□ 0.99
CDK5RAP3-201ENST00000338399 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
CDK5RAP3-201ENST00000338399 EFCAB6Q5THR3 1501 aa21.23■□□□□ 0.99
CDK5RAP3-201ENST00000338399 ABCC3O15438 1527 aa21.23■□□□□ 0.99
CDK5RAP3-201ENST00000338399 L3MBTL2Q969R5 705 aa21.22■□□□□ 0.99
CDK5RAP3-201ENST00000338399 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
CDK5RAP3-201ENST00000338399 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
CDK5RAP3-201ENST00000338399 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
CDK5RAP3-201ENST00000338399 ZC3H13Q5T200 1668 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-201ENST00000338399 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-201ENST00000338399 PTPRTO14522 1441 aa21.18■□□□□ 0.98
CDK5RAP3-201ENST00000338399 TRPM2O94759 1503 aa21.17■□□□□ 0.98
CDK5RAP3-201ENST00000338399 MLECQ14165 292 aa21.15■□□□□ 0.98
CDK5RAP3-201ENST00000338399 NPATQ14207 1427 aa21.15■□□□□ 0.98
CDK5RAP3-201ENST00000338399 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
CDK5RAP3-201ENST00000338399 CLTCL1P53675 1640 aa21.12■□□□□ 0.97
CDK5RAP3-201ENST00000338399 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
CDK5RAP3-201ENST00000338399 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-201ENST00000338399 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
CDK5RAP3-201ENST00000338399 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
CDK5RAP3-201ENST00000338399 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.97
CDK5RAP3-201ENST00000338399 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
CDK5RAP3-201ENST00000338399 NBPF8Q3BBV2 869 aa21.07■□□□□ 0.96
CDK5RAP3-201ENST00000338399 DCAF11Q8TEB1 546 aa21.06■□□□□ 0.96
CDK5RAP3-201ENST00000338399 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
CDK5RAP3-201ENST00000338399 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
CDK5RAP3-201ENST00000338399 KIF1BO60333 1816 aa21.05■□□□□ 0.96
CDK5RAP3-201ENST00000338399 NOS1P29475 1434 aa21.05■□□□□ 0.96
CDK5RAP3-201ENST00000338399 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
CDK5RAP3-201ENST00000338399 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-201ENST00000338399 PREX1Q8TCU6 1659 aa21.03■□□□□ 0.96
CDK5RAP3-201ENST00000338399 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-201ENST00000338399 SYNMO15061 1565 aa21.02■□□□□ 0.96
CDK5RAP3-201ENST00000338399 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
CDK5RAP3-201ENST00000338399 UHRF1BP1Q6BDS2 1440 aa20.99■□□□□ 0.95
CDK5RAP3-201ENST00000338399 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
CDK5RAP3-201ENST00000338399 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
CDK5RAP3-201ENST00000338399 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
CDK5RAP3-201ENST00000338399 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
CDK5RAP3-201ENST00000338399 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
CDK5RAP3-201ENST00000338399 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
CDK5RAP3-201ENST00000338399 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
CDK5RAP3-201ENST00000338399 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
CDK5RAP3-201ENST00000338399 IDI1Q13907 227 aa20.93■□□□□ 0.94
CDK5RAP3-201ENST00000338399 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
CDK5RAP3-201ENST00000338399 SPATA31D1Q6ZQQ2 1576 aa20.92■□□□□ 0.94
CDK5RAP3-201ENST00000338399 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
CDK5RAP3-201ENST00000338399 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
CDK5RAP3-201ENST00000338399 RALGAPBQ86X10 1494 aa20.9■□□□□ 0.94
CDK5RAP3-201ENST00000338399 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
CDK5RAP3-201ENST00000338399 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
CDK5RAP3-201ENST00000338399 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
CDK5RAP3-201ENST00000338399 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
CDK5RAP3-201ENST00000338399 MADDQ8WXG6 1647 aa20.87■□□□□ 0.93
CDK5RAP3-201ENST00000338399 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
CDK5RAP3-201ENST00000338399 HSPA5P11021 654 aaKnown RBP20.86■□□□□ 0.93
CDK5RAP3-201ENST00000338399 PPLO60437 1756 aa20.86■□□□□ 0.93
CDK5RAP3-201ENST00000338399 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
CDK5RAP3-201ENST00000338399 C3P01024 1663 aa20.85■□□□□ 0.93
CDK5RAP3-201ENST00000338399 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
CDK5RAP3-201ENST00000338399 MYOM2P54296 1465 aa20.84■□□□□ 0.93
CDK5RAP3-201ENST00000338399 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
CDK5RAP3-201ENST00000338399 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.93
CDK5RAP3-201ENST00000338399 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.92
CDK5RAP3-201ENST00000338399 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
CDK5RAP3-201ENST00000338399 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
CDK5RAP3-201ENST00000338399 TNRQ92752 1358 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms