RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 RRP7BPQ9NSQ0 103 aa32.47■■■□□ 2.79
RAB28-203ENST00000338176 PTPRKQ15262 1439 aa32.45■■■□□ 2.79
RAB28-203ENST00000338176 NPATQ14207 1427 aa32.44■■■□□ 2.78
RAB28-203ENST00000338176 KIF15Q9NS87 1388 aa32.44■■■□□ 2.78
RAB28-203ENST00000338176 KDM5DQ9BY66 1539 aa32.42■■■□□ 2.78
RAB28-203ENST00000338176 DUOX2Q9NRD8 1548 aa32.42■■■□□ 2.78
RAB28-203ENST00000338176 WASHC2CQ9Y4E1 1318 aa32.42■■■□□ 2.78
RAB28-203ENST00000338176 RNF17Q9BXT8 1623 aaKnown RBP32.41■■■□□ 2.78
RAB28-203ENST00000338176 EIF2AK4Q9P2K8 1649 aaKnown RBP32.39■■■□□ 2.78
RAB28-203ENST00000338176 FBXO31Q5XUX0 539 aaPredicted RBP32.38■■■□□ 2.77
RAB28-203ENST00000338176 MROH1Q8NDA8 1641 aa32.37■■■□□ 2.77
RAB28-203ENST00000338176 STRCQ7RTU9 1775 aa32.37■■■□□ 2.77
RAB28-203ENST00000338176 MYO3AQ8NEV4 1616 aa32.34■■■□□ 2.77
RAB28-203ENST00000338176 FAM135AQ9P2D6 1515 aa32.33■■■□□ 2.77
RAB28-203ENST00000338176 ABCC3O15438 1527 aa32.32■■■□□ 2.76
RAB28-203ENST00000338176 ANKRD30AQ9BXX3 1397 aa32.32■■■□□ 2.76
RAB28-203ENST00000338176 NCOA1Q15788 1441 aa32.31■■■□□ 2.76
RAB28-203ENST00000338176 PZPP20742 1482 aa32.31■■■□□ 2.76
RAB28-203ENST00000338176 ERBINQ96RT1 1412 aa32.3■■■□□ 2.76
RAB28-203ENST00000338176 CEP152O94986 1710 aa32.29■■■□□ 2.76
RAB28-203ENST00000338176 ADGRL2O95490 1459 aa32.26■■■□□ 2.76
RAB28-203ENST00000338176 CEP170BQ9Y4F5 1589 aaPredicted RBP32.26■■■□□ 2.75
RAB28-203ENST00000338176 ZNF142P52746 1687 aaPredicted RBP32.26■■■□□ 2.75
RAB28-203ENST00000338176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.25■■■□□ 2.75
RAB28-203ENST00000338176 TNRQ92752 1358 aa32.25■■■□□ 2.75
RAB28-203ENST00000338176 CAMSAP1Q5T5Y3 1602 aa32.25■■■□□ 2.75
RAB28-203ENST00000338176 ZC3H13Q5T200 1668 aaKnown RBP32.24■■■□□ 2.75
RAB28-203ENST00000338176 PRDM15P57071 1507 aaPredicted RBP32.21■■■□□ 2.75
RAB28-203ENST00000338176 ILDR1Q86SU0 546 aaPredicted RBP32.21■■■□□ 2.75
RAB28-203ENST00000338176 CFAP65Q6ZU64 1925 aaKnown RBP32.2■■■□□ 2.75
RAB28-203ENST00000338176 DEPDC5O75140 1603 aa32.19■■■□□ 2.74
RAB28-203ENST00000338176 ITGAEP38570 1179 aa32.19■■■□□ 2.74
RAB28-203ENST00000338176 A2ML1A8K2U0 1454 aa32.18■■■□□ 2.74
RAB28-203ENST00000338176 NCKAP5LQ9HCH0 1330 aa32.17■■■□□ 2.74
RAB28-203ENST00000338176 DMRT2Q9Y5R5 561 aa32.14■■■□□ 2.74
RAB28-203ENST00000338176 ERVK-7P63135 1459 aa32.13■■■□□ 2.73
RAB28-203ENST00000338176 SPATA31D1Q6ZQQ2 1576 aa32.12■■■□□ 2.73
RAB28-203ENST00000338176 ANKRD50Q9ULJ7 1429 aa32.12■■■□□ 2.73
RAB28-203ENST00000338176 PTPRTO14522 1441 aa32.1■■■□□ 2.73
RAB28-203ENST00000338176 KANK1Q14678 1352 aa32.08■■■□□ 2.73
RAB28-203ENST00000338176 VWDEQ8N2E2 1590 aa32.07■■■□□ 2.73
RAB28-203ENST00000338176 PLA2R1Q13018 1463 aa32.07■■■□□ 2.72
RAB28-203ENST00000338176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.06■■■□□ 2.72
RAB28-203ENST00000338176 NLRP1Q9C000 1473 aa32.06■■■□□ 2.72
RAB28-203ENST00000338176 ARHGAP31Q2M1Z3 1444 aa32.04■■■□□ 2.72
RAB28-203ENST00000338176 ROCK1Q13464 1354 aa32.04■■■□□ 2.72
RAB28-203ENST00000338176 RRBP1Q9P2E9 1410 aaKnown RBP32.03■■■□□ 2.72
RAB28-203ENST00000338176 UGGT1Q9NYU2 1555 aa32.02■■■□□ 2.72
RAB28-203ENST00000338176 LMTK2Q8IWU2 1503 aa32.02■■■□□ 2.72
RAB28-203ENST00000338176 PKD2Q13563 968 aa32■■■□□ 2.71
RAB28-203ENST00000338176 CERKQ8TCT0 537 aa31.99■■■□□ 2.71
RAB28-203ENST00000338176 THEMISQ8N1K5 641 aaPredicted RBP31.96■■■□□ 2.71
RAB28-203ENST00000338176 FBXO41Q8TF61 875 aa31.95■■■□□ 2.71
RAB28-203ENST00000338176 EFCAB6Q5THR3 1501 aa31.95■■■□□ 2.71
RAB28-203ENST00000338176 NEURL4Q96JN8 1562 aa31.94■■■□□ 2.7
RAB28-203ENST00000338176 POLR1AO95602 1720 aaPredicted RBP31.94■■■□□ 2.7
RAB28-203ENST00000338176 UNC13BO14795 1591 aa31.93■■■□□ 2.7
RAB28-203ENST00000338176 UBR1Q8IWV7 1749 aa31.91■■■□□ 2.7
RAB28-203ENST00000338176 LTBP4Q8N2S1 1624 aa31.9■■■□□ 2.7
RAB28-203ENST00000338176 ZNF335Q9H4Z2 1342 aaPredicted RBP31.89■■■□□ 2.7
RAB28-203ENST00000338176 ANKLE2Q86XL3 938 aa31.89■■■□□ 2.69
RAB28-203ENST00000338176 SYNMO15061 1565 aa31.88■■■□□ 2.69
RAB28-203ENST00000338176 PIK3C2BO00750 1634 aa31.87■■■□□ 2.69
RAB28-203ENST00000338176 TET3O43151 1660 aa31.86■■■□□ 2.69
RAB28-203ENST00000338176 NOS1P29475 1434 aa31.85■■■□□ 2.69
RAB28-203ENST00000338176 IDI1Q13907 227 aa31.84■■■□□ 2.69
RAB28-203ENST00000338176 NUP155O75694 1391 aa31.81■■■□□ 2.68
RAB28-203ENST00000338176 GCC2Q8IWJ2 1684 aa31.81■■■□□ 2.68
RAB28-203ENST00000338176 IQGAP3Q86VI3 1631 aa31.8■■■□□ 2.68
RAB28-203ENST00000338176 NPHP4O75161 1426 aaPredicted RBP31.79■■■□□ 2.68
RAB28-203ENST00000338176 E9PCH4 1651 aa31.78■■■□□ 2.68
RAB28-203ENST00000338176 RPRD2Q5VT52 1461 aaKnown RBP31.77■■■□□ 2.68
RAB28-203ENST00000338176 NAIPQ13075 1403 aa31.77■■■□□ 2.68
RAB28-203ENST00000338176 MED14O60244 1454 aa31.77■■■□□ 2.68
RAB28-203ENST00000338176 LTKP29376 864 aa31.76■■■□□ 2.68
RAB28-203ENST00000338176 STAG3Q9UJ98 1225 aa31.76■■■□□ 2.67
RAB28-203ENST00000338176 ARHGAP23Q9P227 1491 aa31.75■■■□□ 2.67
RAB28-203ENST00000338176 IQGAP1P46940 1657 aa31.74■■■□□ 2.67
RAB28-203ENST00000338176 SLIT1O75093 1534 aa31.73■■■□□ 2.67
RAB28-203ENST00000338176 TXNDC2Q86VQ3 553 aa31.72■■■□□ 2.67
RAB28-203ENST00000338176 SCAF11Q99590 1463 aaKnown RBP31.72■■■□□ 2.67
RAB28-203ENST00000338176 TMEM2Q9UHN6 1383 aa31.7■■■□□ 2.66
RAB28-203ENST00000338176 ADGRB3O60242 1522 aa31.69■■■□□ 2.66
RAB28-203ENST00000338176 SLC52A1Q9NWF4 448 aa31.68■■■□□ 2.66
RAB28-203ENST00000338176 KDM5AP29375 1690 aaKnown RBP31.67■■■□□ 2.66
RAB28-203ENST00000338176 MYO5BQ9ULV0 1848 aa31.66■■■□□ 2.66
RAB28-203ENST00000338176 HFM1A2PYH4 1435 aa31.65■■■□□ 2.66
RAB28-203ENST00000338176 EID1Q9Y6B2 187 aa31.63■■■□□ 2.65
RAB28-203ENST00000338176 STRCP1A6NGW2 1772 aa31.59■■■□□ 2.65
RAB28-203ENST00000338176 IQSEC2Q5JU85 1478 aa31.59■■■□□ 2.65
RAB28-203ENST00000338176 SENP3Q9H4L4 574 aaPredicted RBP31.59■■■□□ 2.65
RAB28-203ENST00000338176 TMEM131LA2VDJ0 1609 aa31.59■■■□□ 2.65
RAB28-203ENST00000338176 CHGAP10645 457 aaKnown RBP31.58■■■□□ 2.65
RAB28-203ENST00000338176 TRIM52Q96A61 297 aa31.56■■■□□ 2.64
RAB28-203ENST00000338176 CPS1P31327 1500 aa31.55■■■□□ 2.64
RAB28-203ENST00000338176 SPHKAPQ2M3C7 1700 aa31.53■■■□□ 2.64
RAB28-203ENST00000338176 ZFYVE9O95405 1425 aa31.52■■■□□ 2.64
RAB28-203ENST00000338176 RIMS2Q9UQ26 1411 aa31.51■■■□□ 2.63
RAB28-203ENST00000338176 SLC26A8Q96RN1 970 aa31.5■■■□□ 2.63
RAB28-203ENST00000338176 UBAP1LF5GYI3 381 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms