RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
CMTM1-204ENST00000336328 CAMSAP1Q5T5Y3 1602 aa27.64■■■□□ 2.02
CMTM1-204ENST00000336328 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
CMTM1-204ENST00000336328 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
CMTM1-204ENST00000336328 NCKAP5LQ9HCH0 1330 aa27.59■■■□□ 2.01
CMTM1-204ENST00000336328 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
CMTM1-204ENST00000336328 TNRQ92752 1358 aa27.59■■■□□ 2.01
CMTM1-204ENST00000336328 ZNF142P52746 1687 aaPredicted RBP27.59■■■□□ 2.01
CMTM1-204ENST00000336328 PZPP20742 1482 aa27.58■■■□□ 2.01
CMTM1-204ENST00000336328 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
CMTM1-204ENST00000336328 CEP170BQ9Y4F5 1589 aaPredicted RBP27.58■■■□□ 2.01
CMTM1-204ENST00000336328 A2ML1A8K2U0 1454 aa27.57■■■□□ 2
CMTM1-204ENST00000336328 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
CMTM1-204ENST00000336328 PTPN23Q9H3S7 1636 aa27.55■■■□□ 2
CMTM1-204ENST00000336328 EIF2AK4Q9P2K8 1649 aaKnown RBP27.54■■■□□ 2
CMTM1-204ENST00000336328 ABCC5O15440 1437 aa27.53■■■□□ 2
CMTM1-204ENST00000336328 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
CMTM1-204ENST00000336328 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
CMTM1-204ENST00000336328 SHANK2Q9UPX8 1470 aa27.51■■■□□ 2
CMTM1-204ENST00000336328 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
CMTM1-204ENST00000336328 RNF17Q9BXT8 1623 aaKnown RBP27.51■■□□□ 1.99
CMTM1-204ENST00000336328 KIF15Q9NS87 1388 aa27.5■■□□□ 1.99
CMTM1-204ENST00000336328 TCOF1Q13428 1488 aaKnown RBP27.49■■□□□ 1.99
CMTM1-204ENST00000336328 DAPK1P53355 1430 aa27.48■■□□□ 1.99
CMTM1-204ENST00000336328 DNMT1P26358 1616 aaKnown RBP27.48■■□□□ 1.99
CMTM1-204ENST00000336328 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
CMTM1-204ENST00000336328 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
CMTM1-204ENST00000336328 ANKLE2Q86XL3 938 aa27.47■■□□□ 1.99
CMTM1-204ENST00000336328 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
CMTM1-204ENST00000336328 ERBINQ96RT1 1412 aa27.45■■□□□ 1.98
CMTM1-204ENST00000336328 ABCC3O15438 1527 aa27.45■■□□□ 1.98
CMTM1-204ENST00000336328 LTBP4Q8N2S1 1624 aa27.43■■□□□ 1.98
CMTM1-204ENST00000336328 IQSEC2Q5JU85 1478 aa27.43■■□□□ 1.98
CMTM1-204ENST00000336328 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
CMTM1-204ENST00000336328 CROCC2H7BZ55 1655 aa27.42■■□□□ 1.98
CMTM1-204ENST00000336328 KANK1Q14678 1352 aa27.41■■□□□ 1.98
CMTM1-204ENST00000336328 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
CMTM1-204ENST00000336328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.4■■□□□ 1.98
CMTM1-204ENST00000336328 UGGT1Q9NYU2 1555 aa27.39■■□□□ 1.97
CMTM1-204ENST00000336328 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
CMTM1-204ENST00000336328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
CMTM1-204ENST00000336328 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
CMTM1-204ENST00000336328 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
CMTM1-204ENST00000336328 CFAP65Q6ZU64 1925 aaKnown RBP27.35■■□□□ 1.97
CMTM1-204ENST00000336328 ARHGAP31Q2M1Z3 1444 aa27.34■■□□□ 1.97
CMTM1-204ENST00000336328 ERVK-7P63135 1459 aa27.34■■□□□ 1.97
CMTM1-204ENST00000336328 CEP152O94986 1710 aa27.32■■□□□ 1.96
CMTM1-204ENST00000336328 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
CMTM1-204ENST00000336328 POLR1AO95602 1720 aaPredicted RBP27.31■■□□□ 1.96
CMTM1-204ENST00000336328 ADGRL2O95490 1459 aa27.27■■□□□ 1.96
CMTM1-204ENST00000336328 MED14O60244 1454 aa27.26■■□□□ 1.95
CMTM1-204ENST00000336328 DEPDC5O75140 1603 aa27.26■■□□□ 1.95
CMTM1-204ENST00000336328 NPHP4O75161 1426 aaPredicted RBP27.25■■□□□ 1.95
CMTM1-204ENST00000336328 UBAP1LF5GYI3 381 aa27.24■■□□□ 1.95
CMTM1-204ENST00000336328 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
CMTM1-204ENST00000336328 NEURL4Q96JN8 1562 aa27.23■■□□□ 1.95
CMTM1-204ENST00000336328 EID1Q9Y6B2 187 aa27.21■■□□□ 1.95
CMTM1-204ENST00000336328 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
CMTM1-204ENST00000336328 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
CMTM1-204ENST00000336328 CPS1P31327 1500 aa27.2■■□□□ 1.94
CMTM1-204ENST00000336328 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
CMTM1-204ENST00000336328 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
CMTM1-204ENST00000336328 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
CMTM1-204ENST00000336328 TOM1O60784 492 aa27.16■■□□□ 1.94
CMTM1-204ENST00000336328 SLC52A1Q9NWF4 448 aa27.15■■□□□ 1.94
CMTM1-204ENST00000336328 IDI1Q13907 227 aa27.14■■□□□ 1.94
CMTM1-204ENST00000336328 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
CMTM1-204ENST00000336328 ROCK1Q13464 1354 aa27.13■■□□□ 1.93
CMTM1-204ENST00000336328 SCAF11Q99590 1463 aaKnown RBP27.13■■□□□ 1.93
CMTM1-204ENST00000336328 LTKP29376 864 aa27.11■■□□□ 1.93
CMTM1-204ENST00000336328 SLIT1O75093 1534 aa27.11■■□□□ 1.93
CMTM1-204ENST00000336328 ARHGAP23Q9P227 1491 aa27.1■■□□□ 1.93
CMTM1-204ENST00000336328 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
CMTM1-204ENST00000336328 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
CMTM1-204ENST00000336328 NOS1P29475 1434 aa27.07■■□□□ 1.92
CMTM1-204ENST00000336328 EFCAB6Q5THR3 1501 aa27.07■■□□□ 1.92
CMTM1-204ENST00000336328 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
CMTM1-204ENST00000336328 PIK3C2BO00750 1634 aa27.06■■□□□ 1.92
CMTM1-204ENST00000336328 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
CMTM1-204ENST00000336328 ITGAEP38570 1179 aa27.06■■□□□ 1.92
CMTM1-204ENST00000336328 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
CMTM1-204ENST00000336328 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
CMTM1-204ENST00000336328 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
CMTM1-204ENST00000336328 PIP4K2BP78356 416 aa27■■□□□ 1.91
CMTM1-204ENST00000336328 TET3O43151 1660 aa26.99■■□□□ 1.91
CMTM1-204ENST00000336328 SYNMO15061 1565 aa26.99■■□□□ 1.91
CMTM1-204ENST00000336328 UNC13BO14795 1591 aa26.97■■□□□ 1.91
CMTM1-204ENST00000336328 NUP155O75694 1391 aa26.96■■□□□ 1.91
CMTM1-204ENST00000336328 BCANQ96GW7 911 aa26.95■■□□□ 1.9
CMTM1-204ENST00000336328 LRRC7Q96NW7 1537 aa26.95■■□□□ 1.9
CMTM1-204ENST00000336328 GCC2Q8IWJ2 1684 aa26.95■■□□□ 1.9
CMTM1-204ENST00000336328 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
CMTM1-204ENST00000336328 KCNA6P17658 529 aa26.91■■□□□ 1.9
CMTM1-204ENST00000336328 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.91■■□□□ 1.9
CMTM1-204ENST00000336328 STRCP1A6NGW2 1772 aa26.91■■□□□ 1.9
CMTM1-204ENST00000336328 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
CMTM1-204ENST00000336328 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
CMTM1-204ENST00000336328 HSPA1LP34931 641 aa26.89■■□□□ 1.9
CMTM1-204ENST00000336328 SLC26A8Q96RN1 970 aa26.89■■□□□ 1.9
CMTM1-204ENST00000336328 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms