RNA–Protein interactions for RNA: ENST00000335503.3

CCT6A-202, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 5 BASIC

Gene CCT6A, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-202ENST00000335503 DEPDC5O75140 1603 aa24.25■■□□□ 1.47
CCT6A-202ENST00000335503 ANKRD30BQ9BXX2 1392 aa24.25■■□□□ 1.47
CCT6A-202ENST00000335503 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
CCT6A-202ENST00000335503 FRMPD1Q5SYB0 1578 aa24.23■■□□□ 1.47
CCT6A-202ENST00000335503 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
CCT6A-202ENST00000335503 PKD2Q13563 968 aa24.22■■□□□ 1.47
CCT6A-202ENST00000335503 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
CCT6A-202ENST00000335503 RAPGEF3O95398 923 aa24.2■■□□□ 1.46
CCT6A-202ENST00000335503 A2MP01023 1474 aa24.19■■□□□ 1.46
CCT6A-202ENST00000335503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.18■■□□□ 1.462e-6■■■□□ 19
CCT6A-202ENST00000335503 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
CCT6A-202ENST00000335503 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
CCT6A-202ENST00000335503 DIP2CQ9Y2E4 1556 aa24.17■■□□□ 1.46
CCT6A-202ENST00000335503 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
CCT6A-202ENST00000335503 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
CCT6A-202ENST00000335503 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.45
CCT6A-202ENST00000335503 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.45
CCT6A-202ENST00000335503 GTF3C3Q9Y5Q9 886 aa24.13■■□□□ 1.45
CCT6A-202ENST00000335503 VWDEQ8N2E2 1590 aa24.12■■□□□ 1.45
CCT6A-202ENST00000335503 KIF3BO15066 747 aa24.11■■□□□ 1.45
CCT6A-202ENST00000335503 TET3O43151 1660 aa24.1■■□□□ 1.45
CCT6A-202ENST00000335503 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
CCT6A-202ENST00000335503 KANK1Q14678 1352 aa24.09■■□□□ 1.45
CCT6A-202ENST00000335503 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
CCT6A-202ENST00000335503 E9PCH4 1651 aa24.08■■□□□ 1.45
CCT6A-202ENST00000335503 YEATS2Q9ULM3 1422 aa24.07■■□□□ 1.44
CCT6A-202ENST00000335503 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
CCT6A-202ENST00000335503 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
CCT6A-202ENST00000335503 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
CCT6A-202ENST00000335503 CEP152O94986 1710 aa24.04■■□□□ 1.44
CCT6A-202ENST00000335503 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
CCT6A-202ENST00000335503 ATP10AO60312 1499 aa24■■□□□ 1.43
CCT6A-202ENST00000335503 PLA2R1Q13018 1463 aa24■■□□□ 1.43
CCT6A-202ENST00000335503 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
CCT6A-202ENST00000335503 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
CCT6A-202ENST00000335503 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
CCT6A-202ENST00000335503 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
CCT6A-202ENST00000335503 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
CCT6A-202ENST00000335503 REREQ9P2R6 1566 aa23.98■■□□□ 1.43
CCT6A-202ENST00000335503 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
CCT6A-202ENST00000335503 MYT1Q01538 1121 aa23.96■■□□□ 1.43
CCT6A-202ENST00000335503 TRPM2O94759 1503 aa23.95■■□□□ 1.42
CCT6A-202ENST00000335503 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
CCT6A-202ENST00000335503 ABCC3O15438 1527 aa23.92■■□□□ 1.42
CCT6A-202ENST00000335503 GGT6Q6P531 493 aa23.92■■□□□ 1.42
CCT6A-202ENST00000335503 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
CCT6A-202ENST00000335503 PTPRTO14522 1441 aa23.9■■□□□ 1.42
CCT6A-202ENST00000335503 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.42
CCT6A-202ENST00000335503 AGLP35573 1532 aa23.89■■□□□ 1.42
CCT6A-202ENST00000335503 CLTCL1P53675 1640 aa23.87■■□□□ 1.41
CCT6A-202ENST00000335503 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
CCT6A-202ENST00000335503 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
CCT6A-202ENST00000335503 NPATQ14207 1427 aa23.82■■□□□ 1.4
CCT6A-202ENST00000335503 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
CCT6A-202ENST00000335503 NBPF8Q3BBV2 869 aa23.81■■□□□ 1.4
CCT6A-202ENST00000335503 UHRF1BP1Q6BDS2 1440 aa23.8■■□□□ 1.4
CCT6A-202ENST00000335503 KIF1BO60333 1816 aa23.8■■□□□ 1.4
CCT6A-202ENST00000335503 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
CCT6A-202ENST00000335503 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
CCT6A-202ENST00000335503 UGGT1Q9NYU2 1555 aa23.77■■□□□ 1.4
CCT6A-202ENST00000335503 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
CCT6A-202ENST00000335503 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
CCT6A-202ENST00000335503 RGL3Q3MIN7 710 aa23.75■■□□□ 1.39
CCT6A-202ENST00000335503 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
CCT6A-202ENST00000335503 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
CCT6A-202ENST00000335503 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
CCT6A-202ENST00000335503 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
CCT6A-202ENST00000335503 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
CCT6A-202ENST00000335503 PREX1Q8TCU6 1659 aa23.72■■□□□ 1.39
CCT6A-202ENST00000335503 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
CCT6A-202ENST00000335503 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
CCT6A-202ENST00000335503 NOS1P29475 1434 aa23.71■■□□□ 1.39
CCT6A-202ENST00000335503 SYNMO15061 1565 aa23.7■■□□□ 1.38
CCT6A-202ENST00000335503 TRPM1Q7Z4N2 1603 aa23.7■■□□□ 1.38
CCT6A-202ENST00000335503 PRAG1Q86YV5 1406 aa23.7■■□□□ 1.38
CCT6A-202ENST00000335503 PIK3C2BO00750 1634 aa23.69■■□□□ 1.38
CCT6A-202ENST00000335503 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
CCT6A-202ENST00000335503 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
CCT6A-202ENST00000335503 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
CCT6A-202ENST00000335503 YTHDC1Q96MU7 727 aaKnown RBP23.66■■□□□ 1.38
CCT6A-202ENST00000335503 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
CCT6A-202ENST00000335503 MADDQ8WXG6 1647 aa23.64■■□□□ 1.38
CCT6A-202ENST00000335503 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.38
CCT6A-202ENST00000335503 MLECQ14165 292 aa23.64■■□□□ 1.37
CCT6A-202ENST00000335503 ARID4BQ4LE39 1312 aaPredicted RBP23.6■■□□□ 1.37
CCT6A-202ENST00000335503 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
CCT6A-202ENST00000335503 LAMC1P11047 1609 aa23.6■■□□□ 1.37
CCT6A-202ENST00000335503 STAC3Q96MF2 364 aa23.6■■□□□ 1.37
CCT6A-202ENST00000335503 PPLO60437 1756 aa23.58■■□□□ 1.37
CCT6A-202ENST00000335503 MYOM2P54296 1465 aa23.58■■□□□ 1.37
CCT6A-202ENST00000335503 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.36
CCT6A-202ENST00000335503 POLR1AO95602 1720 aaPredicted RBP23.57■■□□□ 1.36
CCT6A-202ENST00000335503 USP47Q96K76 1375 aa23.57■■□□□ 1.36
CCT6A-202ENST00000335503 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
CCT6A-202ENST00000335503 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
CCT6A-202ENST00000335503 ESF1Q9H501 851 aaKnown RBP23.55■■□□□ 1.36
CCT6A-202ENST00000335503 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
CCT6A-202ENST00000335503 KIAA1210Q9ULL0 1709 aa23.54■■□□□ 1.36
CCT6A-202ENST00000335503 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
CCT6A-202ENST00000335503 SLC52A1Q9NWF4 448 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms