RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 ARHGEF5Q12774 1597 aa17.58■□□□□ 0.41
C9orf85-201ENST00000334731 KIF3BO15066 747 aa17.58■□□□□ 0.4
C9orf85-201ENST00000334731 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.4
C9orf85-201ENST00000334731 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
C9orf85-201ENST00000334731 NPATQ14207 1427 aa17.56■□□□□ 0.4
C9orf85-201ENST00000334731 SETD1BQ9UPS6 1966 aaKnown RBP17.55■□□□□ 0.4
C9orf85-201ENST00000334731 MROH2AA6NES4 1674 aa17.52■□□□□ 0.4
C9orf85-201ENST00000334731 PTPRKQ15262 1439 aa17.52■□□□□ 0.4
C9orf85-201ENST00000334731 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
C9orf85-201ENST00000334731 FBXO41Q8TF61 875 aa17.5■□□□□ 0.39
C9orf85-201ENST00000334731 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
C9orf85-201ENST00000334731 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
C9orf85-201ENST00000334731 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
C9orf85-201ENST00000334731 ABCC5O15440 1437 aa17.47■□□□□ 0.39
C9orf85-201ENST00000334731 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
C9orf85-201ENST00000334731 FGD6Q6ZV73 1430 aa17.47■□□□□ 0.39
C9orf85-201ENST00000334731 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
C9orf85-201ENST00000334731 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
C9orf85-201ENST00000334731 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
C9orf85-201ENST00000334731 PTPRTO14522 1441 aa17.44■□□□□ 0.38
C9orf85-201ENST00000334731 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
C9orf85-201ENST00000334731 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
C9orf85-201ENST00000334731 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
C9orf85-201ENST00000334731 RRP7BPQ9NSQ0 103 aa17.43■□□□□ 0.38
C9orf85-201ENST00000334731 FAM135AQ9P2D6 1515 aa17.42■□□□□ 0.38
C9orf85-201ENST00000334731 DAPK1P53355 1430 aa17.42■□□□□ 0.38
C9orf85-201ENST00000334731 PZPP20742 1482 aa17.41■□□□□ 0.38
C9orf85-201ENST00000334731 SHANK2Q9UPX8 1470 aa17.41■□□□□ 0.38
C9orf85-201ENST00000334731 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
C9orf85-201ENST00000334731 TNRQ92752 1358 aa17.4■□□□□ 0.38
C9orf85-201ENST00000334731 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
C9orf85-201ENST00000334731 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
C9orf85-201ENST00000334731 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
C9orf85-201ENST00000334731 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
C9orf85-201ENST00000334731 PKD2Q13563 968 aa17.39■□□□□ 0.37
C9orf85-201ENST00000334731 CHIC2Q9UKJ5 165 aa17.39■□□□□ 0.37
C9orf85-201ENST00000334731 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
C9orf85-201ENST00000334731 MYO3AQ8NEV4 1616 aa17.38■□□□□ 0.37
C9orf85-201ENST00000334731 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
C9orf85-201ENST00000334731 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
C9orf85-201ENST00000334731 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
C9orf85-201ENST00000334731 ABCC3O15438 1527 aa17.37■□□□□ 0.37
C9orf85-201ENST00000334731 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
C9orf85-201ENST00000334731 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
C9orf85-201ENST00000334731 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
C9orf85-201ENST00000334731 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
C9orf85-201ENST00000334731 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
C9orf85-201ENST00000334731 ZNF142P52746 1687 aaPredicted RBP17.35■□□□□ 0.37
C9orf85-201ENST00000334731 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
C9orf85-201ENST00000334731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■□□□□ 8.5
C9orf85-201ENST00000334731 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
C9orf85-201ENST00000334731 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
C9orf85-201ENST00000334731 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
C9orf85-201ENST00000334731 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
C9orf85-201ENST00000334731 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
C9orf85-201ENST00000334731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
C9orf85-201ENST00000334731 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
C9orf85-201ENST00000334731 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
C9orf85-201ENST00000334731 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
C9orf85-201ENST00000334731 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
C9orf85-201ENST00000334731 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
C9orf85-201ENST00000334731 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
C9orf85-201ENST00000334731 PRDM15P57071 1507 aaPredicted RBP17.27■□□□□ 0.36
C9orf85-201ENST00000334731 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.35
C9orf85-201ENST00000334731 KANK1Q14678 1352 aa17.27■□□□□ 0.35
C9orf85-201ENST00000334731 UGGT1Q9NYU2 1555 aa17.25■□□□□ 0.35
C9orf85-201ENST00000334731 POTEHQ6S545 545 aa17.25■□□□□ 0.35
C9orf85-201ENST00000334731 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
C9orf85-201ENST00000334731 KCNA4P22459 653 aa17.23■□□□□ 0.35
C9orf85-201ENST00000334731 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
C9orf85-201ENST00000334731 CEP152O94986 1710 aa17.22■□□□□ 0.35
C9orf85-201ENST00000334731 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.34
C9orf85-201ENST00000334731 VWDEQ8N2E2 1590 aa17.2■□□□□ 0.34
C9orf85-201ENST00000334731 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
C9orf85-201ENST00000334731 MED14O60244 1454 aa17.18■□□□□ 0.34
C9orf85-201ENST00000334731 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
C9orf85-201ENST00000334731 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
C9orf85-201ENST00000334731 ITGAEP38570 1179 aa17.18■□□□□ 0.34
C9orf85-201ENST00000334731 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
C9orf85-201ENST00000334731 IDI1Q13907 227 aa17.17■□□□□ 0.34
C9orf85-201ENST00000334731 LTKP29376 864 aa17.16■□□□□ 0.34
C9orf85-201ENST00000334731 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
C9orf85-201ENST00000334731 NOS1P29475 1434 aa17.13■□□□□ 0.33
C9orf85-201ENST00000334731 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
C9orf85-201ENST00000334731 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
C9orf85-201ENST00000334731 CFAP65Q6ZU64 1925 aaKnown RBP17.13■□□□□ 0.33
C9orf85-201ENST00000334731 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 SLC52A1Q9NWF4 448 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 UBR1Q8IWV7 1749 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
C9orf85-201ENST00000334731 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
C9orf85-201ENST00000334731 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
C9orf85-201ENST00000334731 SLIT1O75093 1534 aa17.11■□□□□ 0.33
C9orf85-201ENST00000334731 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
C9orf85-201ENST00000334731 SYNMO15061 1565 aa17.09■□□□□ 0.33
C9orf85-201ENST00000334731 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
C9orf85-201ENST00000334731 CPS1P31327 1500 aa17.08■□□□□ 0.32
C9orf85-201ENST00000334731 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms