RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
CCDC172-201ENST00000333254 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
CCDC172-201ENST00000333254 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
CCDC172-201ENST00000333254 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
CCDC172-201ENST00000333254 ABCC1P33527 1531 aa14.83□□□□□ -0.03
CCDC172-201ENST00000333254 MYT1Q01538 1121 aa14.83□□□□□ -0.04
CCDC172-201ENST00000333254 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
CCDC172-201ENST00000333254 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
CCDC172-201ENST00000333254 FKBP8Q14318 412 aa14.82□□□□□ -0.04
CCDC172-201ENST00000333254 PLCH2O75038 1416 aa14.82□□□□□ -0.04
CCDC172-201ENST00000333254 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC172-201ENST00000333254 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
CCDC172-201ENST00000333254 HNRNPUQ00839 825 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC172-201ENST00000333254 ZBED9Q6R2W3 1325 aa14.79□□□□□ -0.04
CCDC172-201ENST00000333254 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
CCDC172-201ENST00000333254 CCDC144AA2RUR9 1427 aa14.78□□□□□ -0.04
CCDC172-201ENST00000333254 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
CCDC172-201ENST00000333254 DEPDC5O75140 1603 aa14.78□□□□□ -0.04
CCDC172-201ENST00000333254 RNF17Q9BXT8 1623 aaKnown RBP14.78□□□□□ -0.04
CCDC172-201ENST00000333254 TSHZ2Q9NRE2 1034 aa14.77□□□□□ -0.05
CCDC172-201ENST00000333254 RTEL1-TNFRSF6BF6WH68 1400 aa14.77□□□□□ -0.05
CCDC172-201ENST00000333254 PLA2R1Q13018 1463 aa14.77□□□□□ -0.05
CCDC172-201ENST00000333254 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
CCDC172-201ENST00000333254 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
CCDC172-201ENST00000333254 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
CCDC172-201ENST00000333254 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CCDC172-201ENST00000333254 A2MP01023 1474 aa14.73□□□□□ -0.05
CCDC172-201ENST00000333254 CEP152O94986 1710 aa14.73□□□□□ -0.05
CCDC172-201ENST00000333254 ZFYVE16Q7Z3T8 1539 aa14.73□□□□□ -0.05
CCDC172-201ENST00000333254 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
CCDC172-201ENST00000333254 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
CCDC172-201ENST00000333254 WDR7Q9Y4E6 1490 aa14.72□□□□□ -0.05
CCDC172-201ENST00000333254 INO80Q9ULG1 1556 aaPredicted RBP14.72□□□□□ -0.05
CCDC172-201ENST00000333254 SPHKAPQ2M3C7 1700 aa14.71□□□□□ -0.06
CCDC172-201ENST00000333254 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.06
CCDC172-201ENST00000333254 TET3O43151 1660 aa14.71□□□□□ -0.06
CCDC172-201ENST00000333254 TRPM2O94759 1503 aa14.69□□□□□ -0.06
CCDC172-201ENST00000333254 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
CCDC172-201ENST00000333254 VWDEQ8N2E2 1590 aa14.69□□□□□ -0.06
CCDC172-201ENST00000333254 ZMYM4Q5VZL5 1548 aa14.68□□□□□ -0.06
CCDC172-201ENST00000333254 SMG6Q86US8 1419 aaKnown RBP14.68□□□□□ -0.06
CCDC172-201ENST00000333254 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
CCDC172-201ENST00000333254 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
CCDC172-201ENST00000333254 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
CCDC172-201ENST00000333254 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
CCDC172-201ENST00000333254 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
CCDC172-201ENST00000333254 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
CCDC172-201ENST00000333254 DCAF11Q8TEB1 546 aa14.67□□□□□ -0.06
CCDC172-201ENST00000333254 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
CCDC172-201ENST00000333254 STAC3Q96MF2 364 aa14.66□□□□□ -0.06
CCDC172-201ENST00000333254 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
CCDC172-201ENST00000333254 INSRP06213 1382 aa14.65□□□□□ -0.06
CCDC172-201ENST00000333254 RALBP1Q15311 655 aa14.65□□□□□ -0.06
CCDC172-201ENST00000333254 BCANQ96GW7 911 aa14.65□□□□□ -0.06
CCDC172-201ENST00000333254 PTPRTO14522 1441 aa14.65□□□□□ -0.06
CCDC172-201ENST00000333254 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
CCDC172-201ENST00000333254 ATP7AQ04656 1500 aa14.64□□□□□ -0.07
CCDC172-201ENST00000333254 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
CCDC172-201ENST00000333254 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
CCDC172-201ENST00000333254 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
CCDC172-201ENST00000333254 MYBBP1AQ9BQG0 1328 aaKnown RBP14.62□□□□□ -0.07
CCDC172-201ENST00000333254 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
CCDC172-201ENST00000333254 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
CCDC172-201ENST00000333254 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
CCDC172-201ENST00000333254 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
CCDC172-201ENST00000333254 RNF123Q5XPI4 1314 aa14.6□□□□□ -0.07
CCDC172-201ENST00000333254 CFAP74Q9C0B2 1584 aa14.6□□□□□ -0.07
CCDC172-201ENST00000333254 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
CCDC172-201ENST00000333254 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
CCDC172-201ENST00000333254 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
CCDC172-201ENST00000333254 SPAG9O60271 1321 aaKnown RBP14.58□□□□□ -0.07
CCDC172-201ENST00000333254 IFT172Q9UG01 1749 aa14.58□□□□□ -0.07
CCDC172-201ENST00000333254 FANCAO15360 1455 aa14.58□□□□□ -0.08
CCDC172-201ENST00000333254 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
CCDC172-201ENST00000333254 KIF1BO60333 1816 aa14.57□□□□□ -0.08
CCDC172-201ENST00000333254 TESK2Q96S53 571 aa14.56□□□□□ -0.08
CCDC172-201ENST00000333254 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
CCDC172-201ENST00000333254 SYNMO15061 1565 aa14.55□□□□□ -0.08
CCDC172-201ENST00000333254 KIDINS220Q9ULH0 1771 aa14.55□□□□□ -0.08
CCDC172-201ENST00000333254 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
CCDC172-201ENST00000333254 MYOM2P54296 1465 aa14.54□□□□□ -0.08
CCDC172-201ENST00000333254 KANK1Q14678 1352 aa14.54□□□□□ -0.08
CCDC172-201ENST00000333254 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
CCDC172-201ENST00000333254 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
CCDC172-201ENST00000333254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC172-201ENST00000333254 EFCAB6Q5THR3 1501 aa14.54□□□□□ -0.08
CCDC172-201ENST00000333254 ADGRL1O94910 1474 aa14.53□□□□□ -0.08
CCDC172-201ENST00000333254 MAP3K4Q9Y6R4 1608 aa14.53□□□□□ -0.08
CCDC172-201ENST00000333254 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.08
CCDC172-201ENST00000333254 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.08
CCDC172-201ENST00000333254 SCAF11Q99590 1463 aaKnown RBP14.52□□□□□ -0.08
CCDC172-201ENST00000333254 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.09
CCDC172-201ENST00000333254 POLR3GLQ9BT43 218 aa14.52□□□□□ -0.09
CCDC172-201ENST00000333254 MYOM1P52179 1685 aa14.51□□□□□ -0.09
CCDC172-201ENST00000333254 TMF1P82094 1093 aa14.51□□□□□ -0.09
CCDC172-201ENST00000333254 RBM19Q9Y4C8 960 aaKnown RBP14.51□□□□□ -0.09
CCDC172-201ENST00000333254 MYO3AQ8NEV4 1616 aa14.51□□□□□ -0.09
CCDC172-201ENST00000333254 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
CCDC172-201ENST00000333254 BLMP54132 1417 aaPredicted RBP14.5□□□□□ -0.09
CCDC172-201ENST00000333254 KDM5AP29375 1690 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms