RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 DHX29Q7Z478 1369 aaKnown RBP28.95■■■□□ 2.23
SUMO3-201ENST00000332859 KIF13AQ9H1H9 1805 aa28.95■■■□□ 2.22
SUMO3-201ENST00000332859 RICTORQ6R327 1708 aa28.94■■■□□ 2.22
SUMO3-201ENST00000332859 TSPOAP1O95153 1857 aa28.93■■■□□ 2.22
SUMO3-201ENST00000332859 RPRD2Q5VT52 1461 aaKnown RBP28.92■■■□□ 2.22
SUMO3-201ENST00000332859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.92■■■□□ 2.22
SUMO3-201ENST00000332859 DEPDC5O75140 1603 aa28.91■■■□□ 2.22
SUMO3-201ENST00000332859 A2MP01023 1474 aa28.89■■■□□ 2.22
SUMO3-201ENST00000332859 RAPGEF3O95398 923 aa28.89■■■□□ 2.22
SUMO3-201ENST00000332859 PPP1R15AO75807 674 aaPredicted RBP28.88■■■□□ 2.21
SUMO3-201ENST00000332859 ABCA6Q8N139 1617 aa28.86■■■□□ 2.21
SUMO3-201ENST00000332859 FRMPD1Q5SYB0 1578 aa28.85■■■□□ 2.21
SUMO3-201ENST00000332859 ZMYM4Q5VZL5 1548 aa28.82■■■□□ 2.2
SUMO3-201ENST00000332859 KIF3BO15066 747 aa28.82■■■□□ 2.2
SUMO3-201ENST00000332859 KANK1Q14678 1352 aa28.82■■■□□ 2.2
SUMO3-201ENST00000332859 PRDM15P57071 1507 aaPredicted RBP28.81■■■□□ 2.2
SUMO3-201ENST00000332859 DIP2CQ9Y2E4 1556 aa28.8■■■□□ 2.2
SUMO3-201ENST00000332859 VWDEQ8N2E2 1590 aa28.79■■■□□ 2.2
SUMO3-201ENST00000332859 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
SUMO3-201ENST00000332859 RNF17Q9BXT8 1623 aaKnown RBP28.78■■■□□ 2.2
SUMO3-201ENST00000332859 BCORL1Q5H9F3 1711 aa28.77■■■□□ 2.2
SUMO3-201ENST00000332859 TET3O43151 1660 aa28.74■■■□□ 2.19
SUMO3-201ENST00000332859 L3MBTL2Q969R5 705 aa28.73■■■□□ 2.19
SUMO3-201ENST00000332859 YEATS2Q9ULM3 1422 aa28.71■■■□□ 2.19
SUMO3-201ENST00000332859 ATP10AO60312 1499 aa28.7■■■□□ 2.19
SUMO3-201ENST00000332859 E9PCH4 1651 aa28.7■■■□□ 2.18
SUMO3-201ENST00000332859 CCDC144AA2RUR9 1427 aa28.69■■■□□ 2.18
SUMO3-201ENST00000332859 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
SUMO3-201ENST00000332859 LMTK2Q8IWU2 1503 aa28.67■■■□□ 2.18
SUMO3-201ENST00000332859 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
SUMO3-201ENST00000332859 EFCAB6Q5THR3 1501 aa28.62■■■□□ 2.17
SUMO3-201ENST00000332859 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
SUMO3-201ENST00000332859 CEP152O94986 1710 aa28.6■■■□□ 2.17
SUMO3-201ENST00000332859 COL17A1Q9UMD9 1497 aaPredicted RBP28.6■■■□□ 2.17
SUMO3-201ENST00000332859 TRPM2O94759 1503 aa28.6■■■□□ 2.17
SUMO3-201ENST00000332859 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
SUMO3-201ENST00000332859 PTPRTO14522 1441 aa28.59■■■□□ 2.17
SUMO3-201ENST00000332859 GGT6Q6P531 493 aa28.59■■■□□ 2.17
SUMO3-201ENST00000332859 ABCC3O15438 1527 aa28.55■■■□□ 2.16
SUMO3-201ENST00000332859 ARHGEF40Q8TER5 1519 aa28.55■■■□□ 2.16
SUMO3-201ENST00000332859 MIER1Q8N108 512 aa28.54■■■□□ 2.16
SUMO3-201ENST00000332859 AGLP35573 1532 aa28.52■■■□□ 2.16
SUMO3-201ENST00000332859 ZC3H13Q5T200 1668 aaKnown RBP28.52■■■□□ 2.16
SUMO3-201ENST00000332859 CENPBP07199 599 aaPredicted RBP28.51■■■□□ 2.15
SUMO3-201ENST00000332859 WASHC2CQ9Y4E1 1318 aa28.5■■■□□ 2.15
SUMO3-201ENST00000332859 NBPF8Q3BBV2 869 aa28.5■■■□□ 2.15
SUMO3-201ENST00000332859 UHRF1BP1Q6BDS2 1440 aa28.49■■■□□ 2.15
SUMO3-201ENST00000332859 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
SUMO3-201ENST00000332859 CAMSAP1Q5T5Y3 1602 aa28.48■■■□□ 2.15
SUMO3-201ENST00000332859 CLTCL1P53675 1640 aa28.47■■■□□ 2.15
SUMO3-201ENST00000332859 NPATQ14207 1427 aa28.45■■■□□ 2.14
SUMO3-201ENST00000332859 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
SUMO3-201ENST00000332859 SPATA31E1Q6ZUB1 1445 aa28.43■■■□□ 2.14
SUMO3-201ENST00000332859 RGL3Q3MIN7 710 aa28.41■■■□□ 2.14
SUMO3-201ENST00000332859 ARHGAP31Q2M1Z3 1444 aa28.4■■■□□ 2.14
SUMO3-201ENST00000332859 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
SUMO3-201ENST00000332859 NEURL4Q96JN8 1562 aa28.4■■■□□ 2.14
SUMO3-201ENST00000332859 CNTLNQ9NXG0 1405 aa28.39■■■□□ 2.13
SUMO3-201ENST00000332859 KDM2AQ9Y2K7 1162 aa28.39■■■□□ 2.13
SUMO3-201ENST00000332859 RALGAPBQ86X10 1494 aa28.38■■■□□ 2.13
SUMO3-201ENST00000332859 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
SUMO3-201ENST00000332859 SIGLEC1Q9BZZ2 1709 aa28.37■■■□□ 2.13
SUMO3-201ENST00000332859 EIF4G2P78344 907 aaKnown RBP eCLIP28.36■■■□□ 2.133e-7■■■■■ 67
SUMO3-201ENST00000332859 UGGT1Q9NYU2 1555 aa28.35■■■□□ 2.13
SUMO3-201ENST00000332859 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
SUMO3-201ENST00000332859 HSPA5P11021 654 aaKnown RBP28.33■■■□□ 2.13
SUMO3-201ENST00000332859 NOS1P29475 1434 aa28.33■■■□□ 2.13
SUMO3-201ENST00000332859 KIF1BO60333 1816 aa28.33■■■□□ 2.13
SUMO3-201ENST00000332859 HIRIP3Q9BW71 556 aaPredicted RBP28.32■■■□□ 2.12
SUMO3-201ENST00000332859 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
SUMO3-201ENST00000332859 TRPM1Q7Z4N2 1603 aa28.27■■■□□ 2.12
SUMO3-201ENST00000332859 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.11
SUMO3-201ENST00000332859 CFAP65Q6ZU64 1925 aaKnown RBP28.26■■■□□ 2.11
SUMO3-201ENST00000332859 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
SUMO3-201ENST00000332859 SYNMO15061 1565 aa28.26■■■□□ 2.11
SUMO3-201ENST00000332859 CLTCQ00610 1675 aaKnown RBP28.25■■■□□ 2.11
SUMO3-201ENST00000332859 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
SUMO3-201ENST00000332859 PIK3C2BO00750 1634 aa28.24■■■□□ 2.11
SUMO3-201ENST00000332859 MROH2AA6NES4 1674 aa28.23■■■□□ 2.11
SUMO3-201ENST00000332859 ROCK2O75116 1388 aaKnown RBP28.22■■■□□ 2.11
SUMO3-201ENST00000332859 MADDQ8WXG6 1647 aa28.22■■■□□ 2.11
SUMO3-201ENST00000332859 MLECQ14165 292 aa28.22■■■□□ 2.11
SUMO3-201ENST00000332859 USP47Q96K76 1375 aa28.21■■■□□ 2.11
SUMO3-201ENST00000332859 CARD11Q9BXL7 1154 aa28.21■■■□□ 2.11
SUMO3-201ENST00000332859 ARID4BQ4LE39 1312 aaPredicted RBP28.19■■■□□ 2.1
SUMO3-201ENST00000332859 MYOM2P54296 1465 aa28.18■■■□□ 2.1
SUMO3-201ENST00000332859 LAMC1P11047 1609 aa28.18■■■□□ 2.1
SUMO3-201ENST00000332859 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
SUMO3-201ENST00000332859 ERVK-7P63135 1459 aa28.17■■■□□ 2.1
SUMO3-201ENST00000332859 GPRASP1Q5JY77 1395 aa28.17■■■□□ 2.1
SUMO3-201ENST00000332859 SLC52A1Q9NWF4 448 aa28.16■■■□□ 2.1
SUMO3-201ENST00000332859 CHGAP10645 457 aaKnown RBP28.15■■■□□ 2.1
SUMO3-201ENST00000332859 YTHDC1Q96MU7 727 aaKnown RBP28.15■■■□□ 2.1
SUMO3-201ENST00000332859 ESF1Q9H501 851 aaKnown RBP28.15■■■□□ 2.1
SUMO3-201ENST00000332859 RPGRIP1LQ68CZ1 1315 aa28.11■■■□□ 2.09
SUMO3-201ENST00000332859 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
SUMO3-201ENST00000332859 SPATA31D1Q6ZQQ2 1576 aa28.11■■■□□ 2.09
SUMO3-201ENST00000332859 FBXO31Q5XUX0 539 aaPredicted RBP28.09■■■□□ 2.09
SUMO3-201ENST00000332859 PPLO60437 1756 aa28.09■■■□□ 2.09
SUMO3-201ENST00000332859 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms