RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
SYN3-201ENST00000332840 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
SYN3-201ENST00000332840 SOCS7O14512 581 aa14.91□□□□□ -0.02
SYN3-201ENST00000332840 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
SYN3-201ENST00000332840 GGT6Q6P531 493 aa14.9□□□□□ -0.02
SYN3-201ENST00000332840 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
SYN3-201ENST00000332840 FAM135AQ9P2D6 1515 aa14.9□□□□□ -0.02
SYN3-201ENST00000332840 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
SYN3-201ENST00000332840 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
SYN3-201ENST00000332840 KIF3BO15066 747 aa14.88□□□□□ -0.03
SYN3-201ENST00000332840 NPATQ14207 1427 aa14.88□□□□□ -0.03
SYN3-201ENST00000332840 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
SYN3-201ENST00000332840 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
SYN3-201ENST00000332840 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
SYN3-201ENST00000332840 ABCC5O15440 1437 aa14.86□□□□□ -0.03
SYN3-201ENST00000332840 DAPK1P53355 1430 aa14.86□□□□□ -0.03
SYN3-201ENST00000332840 CAMSAP1Q5T5Y3 1602 aa14.85□□□□□ -0.03
SYN3-201ENST00000332840 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
SYN3-201ENST00000332840 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
SYN3-201ENST00000332840 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
SYN3-201ENST00000332840 ANKRD30AQ9BXX3 1397 aa14.84□□□□□ -0.03
SYN3-201ENST00000332840 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
SYN3-201ENST00000332840 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
SYN3-201ENST00000332840 PTPRTO14522 1441 aa14.83□□□□□ -0.04
SYN3-201ENST00000332840 ERBINQ96RT1 1412 aa14.83□□□□□ -0.04
SYN3-201ENST00000332840 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
SYN3-201ENST00000332840 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
SYN3-201ENST00000332840 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
SYN3-201ENST00000332840 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
SYN3-201ENST00000332840 MYO3AQ8NEV4 1616 aa14.81□□□□□ -0.04
SYN3-201ENST00000332840 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
SYN3-201ENST00000332840 NCOA1Q15788 1441 aa14.8□□□□□ -0.04
SYN3-201ENST00000332840 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
SYN3-201ENST00000332840 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
SYN3-201ENST00000332840 PTPRKQ15262 1439 aa14.78□□□□□ -0.04
SYN3-201ENST00000332840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
SYN3-201ENST00000332840 RRP7BPQ9NSQ0 103 aa14.78□□□□□ -0.04
SYN3-201ENST00000332840 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.04
SYN3-201ENST00000332840 ZNF142P52746 1687 aaPredicted RBP14.77□□□□□ -0.04
SYN3-201ENST00000332840 PZPP20742 1482 aa14.77□□□□□ -0.04
SYN3-201ENST00000332840 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.05
SYN3-201ENST00000332840 ZNF335Q9H4Z2 1342 aaPredicted RBP14.76□□□□□ -0.05
SYN3-201ENST00000332840 KANK1Q14678 1352 aa14.75□□□□□ -0.05
SYN3-201ENST00000332840 UBAP1LF5GYI3 381 aa14.75□□□□□ -0.05
SYN3-201ENST00000332840 CHIC2Q9UKJ5 165 aa14.75□□□□□ -0.05
SYN3-201ENST00000332840 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
SYN3-201ENST00000332840 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
SYN3-201ENST00000332840 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
SYN3-201ENST00000332840 ABCC3O15438 1527 aa14.73□□□□□ -0.05
SYN3-201ENST00000332840 ZC3H13Q5T200 1668 aaKnown RBP14.73□□□□□ -0.05
SYN3-201ENST00000332840 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
SYN3-201ENST00000332840 TNRQ92752 1358 aa14.73□□□□□ -0.05
SYN3-201ENST00000332840 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
SYN3-201ENST00000332840 PRDM15P57071 1507 aaPredicted RBP14.72□□□□□ -0.05
SYN3-201ENST00000332840 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
SYN3-201ENST00000332840 ANKRD50Q9ULJ7 1429 aa14.71□□□□□ -0.05
SYN3-201ENST00000332840 NLRP1Q9C000 1473 aa14.7□□□□□ -0.06
SYN3-201ENST00000332840 ARHGAP31Q2M1Z3 1444 aa14.7□□□□□ -0.06
SYN3-201ENST00000332840 A2ML1A8K2U0 1454 aa14.69□□□□□ -0.06
SYN3-201ENST00000332840 MROH1Q8NDA8 1641 aa14.69□□□□□ -0.06
SYN3-201ENST00000332840 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
SYN3-201ENST00000332840 RRBP1Q9P2E9 1410 aaKnown RBP14.68□□□□□ -0.06
SYN3-201ENST00000332840 PKD2Q13563 968 aa14.68□□□□□ -0.06
SYN3-201ENST00000332840 FBXO31Q5XUX0 539 aaPredicted RBP14.67□□□□□ -0.06
SYN3-201ENST00000332840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
SYN3-201ENST00000332840 DEPDC5O75140 1603 aa14.66□□□□□ -0.06
SYN3-201ENST00000332840 MED1Q15648 1581 aaPredicted RBP14.66□□□□□ -0.06
SYN3-201ENST00000332840 PIP4K2BP78356 416 aa14.66□□□□□ -0.06
SYN3-201ENST00000332840 LMTK2Q8IWU2 1503 aa14.66□□□□□ -0.06
SYN3-201ENST00000332840 ERVK-7P63135 1459 aa14.65□□□□□ -0.06
SYN3-201ENST00000332840 THEMISQ8N1K5 641 aaPredicted RBP14.65□□□□□ -0.06
SYN3-201ENST00000332840 ITGAEP38570 1179 aa14.63□□□□□ -0.07
SYN3-201ENST00000332840 VWDEQ8N2E2 1590 aa14.63□□□□□ -0.07
SYN3-201ENST00000332840 HSPA1LP34931 641 aa14.62□□□□□ -0.07
SYN3-201ENST00000332840 RPRD2Q5VT52 1461 aaKnown RBP14.61□□□□□ -0.07
SYN3-201ENST00000332840 NEURL4Q96JN8 1562 aa14.6□□□□□ -0.07
SYN3-201ENST00000332840 UGGT1Q9NYU2 1555 aa14.6□□□□□ -0.07
SYN3-201ENST00000332840 STRCP1A6NGW2 1772 aa14.6□□□□□ -0.07
SYN3-201ENST00000332840 ANKLE2Q86XL3 938 aa14.59□□□□□ -0.07
SYN3-201ENST00000332840 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
SYN3-201ENST00000332840 UNC13BO14795 1591 aa14.56□□□□□ -0.08
SYN3-201ENST00000332840 CEP152O94986 1710 aa14.56□□□□□ -0.08
SYN3-201ENST00000332840 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
SYN3-201ENST00000332840 NUP155O75694 1391 aa14.55□□□□□ -0.08
SYN3-201ENST00000332840 NOS1P29475 1434 aa14.55□□□□□ -0.08
SYN3-201ENST00000332840 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
SYN3-201ENST00000332840 IQGAP1P46940 1657 aa14.53□□□□□ -0.08
SYN3-201ENST00000332840 ALKQ9UM73 1620 aa14.53□□□□□ -0.08
SYN3-201ENST00000332840 HFM1A2PYH4 1435 aa14.53□□□□□ -0.08
SYN3-201ENST00000332840 CPS1P31327 1500 aa14.52□□□□□ -0.08
SYN3-201ENST00000332840 MED14O60244 1454 aa14.52□□□□□ -0.08
SYN3-201ENST00000332840 TET3O43151 1660 aa14.52□□□□□ -0.09
SYN3-201ENST00000332840 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
SYN3-201ENST00000332840 NAIPQ13075 1403 aa14.51□□□□□ -0.09
SYN3-201ENST00000332840 XIRP1Q702N8 1843 aaKnown RBP14.51□□□□□ -0.09
SYN3-201ENST00000332840 TOM1O60784 492 aa14.51□□□□□ -0.09
SYN3-201ENST00000332840 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
SYN3-201ENST00000332840 SLIT1O75093 1534 aa14.5□□□□□ -0.09
SYN3-201ENST00000332840 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
SYN3-201ENST00000332840 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms