RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 MROH1Q8NDA8 1641 aa12.28□□□□□ -0.44
CPNE8-201ENST00000331366 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.44
CPNE8-201ENST00000331366 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.45
CPNE8-201ENST00000331366 BCL11AQ9H165 835 aa12.27□□□□□ -0.45
CPNE8-201ENST00000331366 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
CPNE8-201ENST00000331366 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.45
CPNE8-201ENST00000331366 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
CPNE8-201ENST00000331366 PTPRTO14522 1441 aa12.26□□□□□ -0.45
CPNE8-201ENST00000331366 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
CPNE8-201ENST00000331366 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
CPNE8-201ENST00000331366 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
CPNE8-201ENST00000331366 CDK11AQ9UQ88 783 aaPredicted RBP12.25□□□□□ -0.45
CPNE8-201ENST00000331366 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
CPNE8-201ENST00000331366 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
CPNE8-201ENST00000331366 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
CPNE8-201ENST00000331366 CFAP74Q9C0B2 1584 aa12.24□□□□□ -0.45
CPNE8-201ENST00000331366 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
CPNE8-201ENST00000331366 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
CPNE8-201ENST00000331366 YTHDC1Q96MU7 727 aaKnown RBP12.23□□□□□ -0.45
CPNE8-201ENST00000331366 MYOM2P54296 1465 aa12.23□□□□□ -0.45
CPNE8-201ENST00000331366 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
CPNE8-201ENST00000331366 PARD3Q8TEW0 1356 aa12.23□□□□□ -0.45
CPNE8-201ENST00000331366 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
CPNE8-201ENST00000331366 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
CPNE8-201ENST00000331366 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
CPNE8-201ENST00000331366 SYCP2Q9BX26 1530 aa12.21□□□□□ -0.45
CPNE8-201ENST00000331366 A2MP01023 1474 aa12.21□□□□□ -0.46
CPNE8-201ENST00000331366 NPC1L1Q9UHC9 1359 aa12.21□□□□□ -0.46
CPNE8-201ENST00000331366 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.46
CPNE8-201ENST00000331366 PIK3C2BO00750 1634 aa12.19□□□□□ -0.46
CPNE8-201ENST00000331366 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
CPNE8-201ENST00000331366 USP47Q96K76 1375 aa12.19□□□□□ -0.46
CPNE8-201ENST00000331366 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CPNE8-201ENST00000331366 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
CPNE8-201ENST00000331366 KIF15Q9NS87 1388 aa12.17□□□□□ -0.46
CPNE8-201ENST00000331366 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
CPNE8-201ENST00000331366 ERICH6Q7L0X2 663 aa12.17□□□□□ -0.46
CPNE8-201ENST00000331366 MAP3K4Q9Y6R4 1608 aa12.17□□□□□ -0.46
CPNE8-201ENST00000331366 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
CPNE8-201ENST00000331366 PPLO60437 1756 aa12.16□□□□□ -0.46
CPNE8-201ENST00000331366 PLCH2O75038 1416 aa12.16□□□□□ -0.46
CPNE8-201ENST00000331366 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-201ENST00000331366 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
CPNE8-201ENST00000331366 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
CPNE8-201ENST00000331366 KIF1BO60333 1816 aa12.15□□□□□ -0.47
CPNE8-201ENST00000331366 ABCA6Q8N139 1617 aa12.14□□□□□ -0.47
CPNE8-201ENST00000331366 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
CPNE8-201ENST00000331366 ANKRD26Q9UPS8 1709 aa12.13□□□□□ -0.47
CPNE8-201ENST00000331366 ZNF518AQ6AHZ1 1483 aa12.13□□□□□ -0.47
CPNE8-201ENST00000331366 FANCAO15360 1455 aa12.12□□□□□ -0.47
CPNE8-201ENST00000331366 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
CPNE8-201ENST00000331366 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
CPNE8-201ENST00000331366 ITGAEP38570 1179 aa12.12□□□□□ -0.47
CPNE8-201ENST00000331366 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
CPNE8-201ENST00000331366 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
CPNE8-201ENST00000331366 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
CPNE8-201ENST00000331366 SBNO2Q9Y2G9 1366 aa12.09□□□□□ -0.47
CPNE8-201ENST00000331366 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
CPNE8-201ENST00000331366 RALBP1Q15311 655 aa12.09□□□□□ -0.47
CPNE8-201ENST00000331366 KIDINS220Q9ULH0 1771 aa12.09□□□□□ -0.47
CPNE8-201ENST00000331366 PIK3C2GO75747 1445 aa12.09□□□□□ -0.47
CPNE8-201ENST00000331366 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
CPNE8-201ENST00000331366 FKBP8Q14318 412 aa12.08□□□□□ -0.48
CPNE8-201ENST00000331366 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
CPNE8-201ENST00000331366 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
CPNE8-201ENST00000331366 NEFLP07196 543 aa12.07□□□□□ -0.48
CPNE8-201ENST00000331366 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
CPNE8-201ENST00000331366 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
CPNE8-201ENST00000331366 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
CPNE8-201ENST00000331366 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
CPNE8-201ENST00000331366 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
CPNE8-201ENST00000331366 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
CPNE8-201ENST00000331366 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-201ENST00000331366 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
CPNE8-201ENST00000331366 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
CPNE8-201ENST00000331366 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
CPNE8-201ENST00000331366 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-201ENST00000331366 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
CPNE8-201ENST00000331366 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
CPNE8-201ENST00000331366 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
CPNE8-201ENST00000331366 NUP155O75694 1391 aa12.03□□□□□ -0.48
CPNE8-201ENST00000331366 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-201ENST00000331366 ADGRB2O60241 1585 aa12.02□□□□□ -0.48
CPNE8-201ENST00000331366 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
CPNE8-201ENST00000331366 SCAF11Q99590 1463 aaKnown RBP12.01□□□□□ -0.49
CPNE8-201ENST00000331366 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
CPNE8-201ENST00000331366 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
CPNE8-201ENST00000331366 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
CPNE8-201ENST00000331366 ADGRB1O14514 1584 aa12□□□□□ -0.49
CPNE8-201ENST00000331366 CAMSAP1Q5T5Y3 1602 aa11.99□□□□□ -0.49
CPNE8-201ENST00000331366 CCDC184Q52MB2 194 aa11.99□□□□□ -0.49
CPNE8-201ENST00000331366 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
CPNE8-201ENST00000331366 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
CPNE8-201ENST00000331366 TESK2Q96S53 571 aa11.98□□□□□ -0.49
CPNE8-201ENST00000331366 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
CPNE8-201ENST00000331366 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
CPNE8-201ENST00000331366 ZNF521Q96K83 1311 aa11.97□□□□□ -0.49
CPNE8-201ENST00000331366 MSH5O43196 834 aa11.97□□□□□ -0.49
CPNE8-201ENST00000331366 PKD2Q13563 968 aa11.96□□□□□ -0.49
CPNE8-201ENST00000331366 PLEKHD1A6NEE1 506 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms