RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 DCAF11Q8TEB1 546 aa31.86■■■□□ 2.69
SOX1-201ENST00000330949 KDM5CP41229 1560 aa31.84■■■□□ 2.69
SOX1-201ENST00000330949 GRIN2AQ12879 1464 aa31.83■■■□□ 2.69
SOX1-201ENST00000330949 PLB1Q6P1J6 1458 aa31.83■■■□□ 2.69
SOX1-201ENST00000330949 MBD5Q9P267 1494 aa31.83■■■□□ 2.69
SOX1-201ENST00000330949 KIF14Q15058 1648 aa31.8■■■□□ 2.68
SOX1-201ENST00000330949 ROCK1Q13464 1354 aa31.79■■■□□ 2.68
SOX1-201ENST00000330949 FAM161AQ3B820 660 aa31.79■■■□□ 2.68
SOX1-201ENST00000330949 SKAP1Q86WV1 359 aa31.78■■■□□ 2.68
SOX1-201ENST00000330949 CRBNQ96SW2 442 aa31.78■■■□□ 2.68
SOX1-201ENST00000330949 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
SOX1-201ENST00000330949 RAPGEF6Q8TEU7 1601 aa31.74■■■□□ 2.67
SOX1-201ENST00000330949 PLIN1O60240 522 aa31.74■■■□□ 2.67
SOX1-201ENST00000330949 KDM2BQ8NHM5 1336 aa31.73■■■□□ 2.67
SOX1-201ENST00000330949 CENPQQ7L2Z9 268 aaPredicted RBP31.73■■■□□ 2.67
SOX1-201ENST00000330949 PKD2Q13563 968 aa31.72■■■□□ 2.67
SOX1-201ENST00000330949 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
SOX1-201ENST00000330949 C8orf34Q49A92 452 aa31.7■■■□□ 2.67
SOX1-201ENST00000330949 NLRP13Q86W25 1043 aa31.7■■■□□ 2.67
SOX1-201ENST00000330949 JPH4Q96JJ6 628 aa31.7■■■□□ 2.67
SOX1-201ENST00000330949 DNMT1P26358 1616 aaKnown RBP31.69■■■□□ 2.66
SOX1-201ENST00000330949 CDCA7LQ96GN5 454 aa31.68■■■□□ 2.66
SOX1-201ENST00000330949 KDM2AQ9Y2K7 1162 aa31.68■■■□□ 2.66
SOX1-201ENST00000330949 L1TD1Q5T7N2 865 aaKnown RBP31.67■■■□□ 2.66
SOX1-201ENST00000330949 CEP170Q5SW79 1584 aa31.65■■■□□ 2.66
SOX1-201ENST00000330949 TROQ12816 1431 aaPredicted RBP31.65■■■□□ 2.66
SOX1-201ENST00000330949 CAMSAP2Q08AD1 1489 aa31.64■■■□□ 2.66
SOX1-201ENST00000330949 RRAGDQ9NQL2 400 aaPredicted RBP31.63■■■□□ 2.65
SOX1-201ENST00000330949 GPATCH8Q9UKJ3 1502 aaKnown RBP31.63■■■□□ 2.65
SOX1-201ENST00000330949 INSRP06213 1382 aa31.63■■■□□ 2.65
SOX1-201ENST00000330949 E9PCH4 1651 aa31.62■■■□□ 2.65
SOX1-201ENST00000330949 RALGAPBQ86X10 1494 aa31.62■■■□□ 2.65
SOX1-201ENST00000330949 PZPP20742 1482 aa31.6■■■□□ 2.65
SOX1-201ENST00000330949 ZMYM4Q5VZL5 1548 aa31.6■■■□□ 2.65
SOX1-201ENST00000330949 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
SOX1-201ENST00000330949 PARD3Q8TEW0 1356 aa31.58■■■□□ 2.65
SOX1-201ENST00000330949 PLEKHH2Q8IVE3 1493 aa31.58■■■□□ 2.65
SOX1-201ENST00000330949 CARD11Q9BXL7 1154 aa31.56■■■□□ 2.64
SOX1-201ENST00000330949 POGKQ9P215 609 aa31.56■■■□□ 2.64
SOX1-201ENST00000330949 KIAA1107Q9UPP5 1409 aa31.54■■■□□ 2.64
SOX1-201ENST00000330949 BLMP54132 1417 aaPredicted RBP31.53■■■□□ 2.64
SOX1-201ENST00000330949 SYNJ2O15056 1496 aa31.53■■■□□ 2.64
SOX1-201ENST00000330949 C20orf194Q5TEA3 1177 aa31.52■■■□□ 2.64
SOX1-201ENST00000330949 VSIG10Q8N0Z9 540 aa31.51■■■□□ 2.64
SOX1-201ENST00000330949 PLEKHD1A6NEE1 506 aa31.5■■■□□ 2.63
SOX1-201ENST00000330949 ZMYND15Q9H091 742 aa31.5■■■□□ 2.63
SOX1-201ENST00000330949 HNRNPMP52272 730 aaKnown RBP eCLIP31.5■■■□□ 2.63
SOX1-201ENST00000330949 NUP155O75694 1391 aa31.5■■■□□ 2.63
SOX1-201ENST00000330949 MAGI1Q96QZ7 1491 aaPredicted RBP31.49■■■□□ 2.63
SOX1-201ENST00000330949 RRP9O43818 475 aaKnown RBP31.48■■■□□ 2.63
SOX1-201ENST00000330949 ST20-MTHFSA0A0A6YYL1 179 aa31.47■■■□□ 2.63
SOX1-201ENST00000330949 HSP90AA2PQ14568 343 aaPredicted RBP31.46■■■□□ 2.63
SOX1-201ENST00000330949 PNNQ9H307 717 aaKnown RBP31.46■■■□□ 2.63
SOX1-201ENST00000330949 NAP1L5Q96NT1 182 aaPredicted RBP31.45■■■□□ 2.63
SOX1-201ENST00000330949 BECN1Q14457 450 aa31.44■■■□□ 2.62
SOX1-201ENST00000330949 VIRMAQ69YN4 1812 aaKnown RBP31.44■■■□□ 2.62
SOX1-201ENST00000330949 ANKRD30AQ9BXX3 1397 aa31.44■■■□□ 2.62
SOX1-201ENST00000330949 CARMIL2Q6F5E8 1435 aa31.44■■■□□ 2.62
SOX1-201ENST00000330949 RGS3P49796 1198 aa31.43■■■□□ 2.62
SOX1-201ENST00000330949 ANKRD50Q9ULJ7 1429 aa31.43■■■□□ 2.62
SOX1-201ENST00000330949 HSP90AA1P07900 732 aaKnown RBP31.43■■■□□ 2.62
SOX1-201ENST00000330949 ARHGEF12Q9NZN5 1544 aa31.42■■■□□ 2.62
SOX1-201ENST00000330949 CLCN1P35523 988 aa31.42■■■□□ 2.62
SOX1-201ENST00000330949 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.42■■■□□ 2.62
SOX1-201ENST00000330949 TSPY4P0CV99 314 aa31.41■■■□□ 2.62
SOX1-201ENST00000330949 TSPY10P0CW01 314 aa31.41■■■□□ 2.62
SOX1-201ENST00000330949 ATP10BO94823 1461 aa31.4■■■□□ 2.62
SOX1-201ENST00000330949 RGL3Q3MIN7 710 aa31.39■■■□□ 2.62
SOX1-201ENST00000330949 NUP160Q12769 1436 aa31.38■■■□□ 2.61
SOX1-201ENST00000330949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.35■■■□□ 2.61
SOX1-201ENST00000330949 USP19O94966 1318 aa31.33■■■□□ 2.61
SOX1-201ENST00000330949 ITSN2Q9NZM3 1697 aa31.32■■■□□ 2.61
SOX1-201ENST00000330949 GOLGA6L3A6NEY3 463 aa31.32■■■□□ 2.6
SOX1-201ENST00000330949 PER1O15534 1290 aaPredicted RBP31.31■■■□□ 2.6
SOX1-201ENST00000330949 ADGRL2O95490 1459 aa31.31■■■□□ 2.6
SOX1-201ENST00000330949 C9orf84Q5VXU9 1444 aa31.31■■■□□ 2.6
SOX1-201ENST00000330949 XRCC6P12956 609 aaKnown RBP eCLIP31.3■■■□□ 2.6
SOX1-201ENST00000330949 SLKQ9H2G2 1235 aaPredicted RBP31.29■■■□□ 2.6
SOX1-201ENST00000330949 ABCC10Q5T3U5 1492 aa31.28■■■□□ 2.6
SOX1-201ENST00000330949 ADGBQ8N7X0 1667 aa31.28■■■□□ 2.6
SOX1-201ENST00000330949 CDC42BPAQ5VT25 1732 aa31.27■■■□□ 2.6
SOX1-201ENST00000330949 FSD2A1L4K1 749 aa31.27■■■□□ 2.6
SOX1-201ENST00000330949 DUSP27Q5VZP5 1158 aa31.27■■■□□ 2.6
SOX1-201ENST00000330949 ADCY10Q96PN6 1610 aa31.26■■■□□ 2.6
SOX1-201ENST00000330949 ANTXR1Q9H6X2 564 aa31.25■■■□□ 2.59
SOX1-201ENST00000330949 EIF3AQ14152 1382 aaKnown RBP31.25■■■□□ 2.59
SOX1-201ENST00000330949 CROCC2H7BZ55 1655 aa31.24■■■□□ 2.59
SOX1-201ENST00000330949 ABCA8O94911 1581 aa31.24■■■□□ 2.59
SOX1-201ENST00000330949 CC2D1BQ5T0F9 858 aaKnown RBP31.2■■■□□ 2.59
SOX1-201ENST00000330949 MAPK8IP3Q9UPT6 1336 aa31.2■■■□□ 2.58
SOX1-201ENST00000330949 PTPRGP23470 1445 aa31.19■■■□□ 2.58
SOX1-201ENST00000330949 GOLGA2Q08379 1002 aa31.17■■■□□ 2.58
SOX1-201ENST00000330949 NBPF1Q3BBV0 1214 aa31.17■■■□□ 2.58
SOX1-201ENST00000330949 ARXQ96QS3 562 aa31.16■■■□□ 2.58
SOX1-201ENST00000330949 ADAMTS8Q9UP79 889 aa31.15■■■□□ 2.58
SOX1-201ENST00000330949 PLEKHH1Q9ULM0 1364 aa31.15■■■□□ 2.58
SOX1-201ENST00000330949 NLRP1Q9C000 1473 aa31.14■■■□□ 2.58
SOX1-201ENST00000330949 PANK2Q9BZ23 570 aa31.14■■■□□ 2.58
SOX1-201ENST00000330949 ZNF521Q96K83 1311 aa31.13■■■□□ 2.57
SOX1-201ENST00000330949 MRE11P49959 708 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms