RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
RAB28-202ENST00000330852 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
RAB28-202ENST00000330852 CAMSAP1Q5T5Y3 1602 aa28.41■■■□□ 2.14
RAB28-202ENST00000330852 CEP170BQ9Y4F5 1589 aaPredicted RBP28.39■■■□□ 2.13
RAB28-202ENST00000330852 WASHC2CQ9Y4E1 1318 aa28.37■■■□□ 2.13
RAB28-202ENST00000330852 PLA2R1Q13018 1463 aa28.36■■■□□ 2.13
RAB28-202ENST00000330852 EIF2AK4Q9P2K8 1649 aaKnown RBP28.36■■■□□ 2.13
RAB28-202ENST00000330852 PZPP20742 1482 aa28.35■■■□□ 2.13
RAB28-202ENST00000330852 RNF17Q9BXT8 1623 aaKnown RBP28.35■■■□□ 2.13
RAB28-202ENST00000330852 PKD2Q13563 968 aa28.32■■■□□ 2.12
RAB28-202ENST00000330852 A2ML1A8K2U0 1454 aa28.32■■■□□ 2.12
RAB28-202ENST00000330852 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
RAB28-202ENST00000330852 ZC3H13Q5T200 1668 aaKnown RBP28.3■■■□□ 2.12
RAB28-202ENST00000330852 SHANK2Q9UPX8 1470 aa28.3■■■□□ 2.12
RAB28-202ENST00000330852 DUOX2Q9NRD8 1548 aa28.3■■■□□ 2.12
RAB28-202ENST00000330852 TNRQ92752 1358 aa28.29■■■□□ 2.12
RAB28-202ENST00000330852 CROCC2H7BZ55 1655 aa28.28■■■□□ 2.12
RAB28-202ENST00000330852 TCOF1Q13428 1488 aaKnown RBP28.27■■■□□ 2.12
RAB28-202ENST00000330852 DNMT1P26358 1616 aaKnown RBP28.27■■■□□ 2.12
RAB28-202ENST00000330852 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
RAB28-202ENST00000330852 ABCC5O15440 1437 aa28.25■■■□□ 2.11
RAB28-202ENST00000330852 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
RAB28-202ENST00000330852 FBXO31Q5XUX0 539 aaPredicted RBP28.25■■■□□ 2.11
RAB28-202ENST00000330852 LTBP4Q8N2S1 1624 aa28.23■■■□□ 2.11
RAB28-202ENST00000330852 ABCC3O15438 1527 aa28.23■■■□□ 2.11
RAB28-202ENST00000330852 NLRP1Q9C000 1473 aa28.21■■■□□ 2.11
RAB28-202ENST00000330852 KIF15Q9NS87 1388 aa28.21■■■□□ 2.11
RAB28-202ENST00000330852 IQSEC2Q5JU85 1478 aa28.21■■■□□ 2.11
RAB28-202ENST00000330852 DAPK1P53355 1430 aa28.21■■■□□ 2.11
RAB28-202ENST00000330852 MROH1Q8NDA8 1641 aa28.2■■■□□ 2.1
RAB28-202ENST00000330852 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
RAB28-202ENST00000330852 POLR1AO95602 1720 aaPredicted RBP28.16■■■□□ 2.1
RAB28-202ENST00000330852 THEMISQ8N1K5 641 aaPredicted RBP28.16■■■□□ 2.1
RAB28-202ENST00000330852 SPATA31D1Q6ZQQ2 1576 aa28.15■■■□□ 2.1
RAB28-202ENST00000330852 RRP7BPQ9NSQ0 103 aa28.15■■■□□ 2.1
RAB28-202ENST00000330852 CEP152O94986 1710 aa28.14■■■□□ 2.1
RAB28-202ENST00000330852 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
RAB28-202ENST00000330852 ANKRD30AQ9BXX3 1397 aa28.13■■■□□ 2.09
RAB28-202ENST00000330852 UGGT1Q9NYU2 1555 aa28.12■■■□□ 2.09
RAB28-202ENST00000330852 CFAP65Q6ZU64 1925 aaKnown RBP28.11■■■□□ 2.09
RAB28-202ENST00000330852 ERVK-7P63135 1459 aa28.1■■■□□ 2.09
RAB28-202ENST00000330852 DEPDC5O75140 1603 aa28.1■■■□□ 2.09
RAB28-202ENST00000330852 ANKLE2Q86XL3 938 aa28.09■■■□□ 2.09
RAB28-202ENST00000330852 ARHGAP31Q2M1Z3 1444 aa28.09■■■□□ 2.09
RAB28-202ENST00000330852 ZNF335Q9H4Z2 1342 aaPredicted RBP28.07■■■□□ 2.08
RAB28-202ENST00000330852 KANK1Q14678 1352 aa28.06■■■□□ 2.08
RAB28-202ENST00000330852 NEURL4Q96JN8 1562 aa28.06■■■□□ 2.08
RAB28-202ENST00000330852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.08
RAB28-202ENST00000330852 ADGRL2O95490 1459 aa28.04■■■□□ 2.08
RAB28-202ENST00000330852 CHIC2Q9UKJ5 165 aa28.03■■■□□ 2.08
RAB28-202ENST00000330852 MED14O60244 1454 aa28.02■■■□□ 2.08
RAB28-202ENST00000330852 FAM50AQ14320 339 aaKnown RBP28.01■■■□□ 2.07
RAB28-202ENST00000330852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.99■■■□□ 2.07
RAB28-202ENST00000330852 LMTK2Q8IWU2 1503 aa27.98■■■□□ 2.07
RAB28-202ENST00000330852 VWDEQ8N2E2 1590 aa27.97■■■□□ 2.07
RAB28-202ENST00000330852 UBR1Q8IWV7 1749 aa27.97■■■□□ 2.07
RAB28-202ENST00000330852 NPHP4O75161 1426 aaPredicted RBP27.96■■■□□ 2.07
RAB28-202ENST00000330852 CPS1P31327 1500 aa27.96■■■□□ 2.07
RAB28-202ENST00000330852 IQGAP1P46940 1657 aa27.93■■■□□ 2.06
RAB28-202ENST00000330852 ANKRD50Q9ULJ7 1429 aa27.9■■■□□ 2.06
RAB28-202ENST00000330852 KDM5AP29375 1690 aaKnown RBP27.89■■■□□ 2.06
RAB28-202ENST00000330852 UBAP1LF5GYI3 381 aa27.88■■■□□ 2.05
RAB28-202ENST00000330852 SLIT1O75093 1534 aa27.88■■■□□ 2.05
RAB28-202ENST00000330852 ARHGAP23Q9P227 1491 aa27.87■■■□□ 2.05
RAB28-202ENST00000330852 EFCAB6Q5THR3 1501 aa27.86■■■□□ 2.05
RAB28-202ENST00000330852 SCAF11Q99590 1463 aaKnown RBP27.86■■■□□ 2.05
RAB28-202ENST00000330852 PIK3C2BO00750 1634 aa27.85■■■□□ 2.05
RAB28-202ENST00000330852 ROCK1Q13464 1354 aa27.84■■■□□ 2.05
RAB28-202ENST00000330852 RPRD2Q5VT52 1461 aaKnown RBP27.82■■■□□ 2.04
RAB28-202ENST00000330852 EID1Q9Y6B2 187 aa27.82■■■□□ 2.04
RAB28-202ENST00000330852 NOS1P29475 1434 aa27.82■■■□□ 2.04
RAB28-202ENST00000330852 TXNDC2Q86VQ3 553 aa27.81■■■□□ 2.04
RAB28-202ENST00000330852 STAG3Q9UJ98 1225 aa27.81■■■□□ 2.04
RAB28-202ENST00000330852 IDI1Q13907 227 aa27.79■■■□□ 2.04
RAB28-202ENST00000330852 SLC52A1Q9NWF4 448 aa27.79■■■□□ 2.04
RAB28-202ENST00000330852 TET3O43151 1660 aa27.78■■■□□ 2.04
RAB28-202ENST00000330852 SYNMO15061 1565 aa27.78■■■□□ 2.04
RAB28-202ENST00000330852 TMEM2Q9UHN6 1383 aa27.78■■■□□ 2.04
RAB28-202ENST00000330852 TOM1O60784 492 aa27.78■■■□□ 2.04
RAB28-202ENST00000330852 LTKP29376 864 aa27.78■■■□□ 2.04
RAB28-202ENST00000330852 UNC13BO14795 1591 aa27.77■■■□□ 2.04
RAB28-202ENST00000330852 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
RAB28-202ENST00000330852 STRCP1A6NGW2 1772 aa27.74■■■□□ 2.03
RAB28-202ENST00000330852 ADGRB3O60242 1522 aa27.71■■■□□ 2.03
RAB28-202ENST00000330852 LRRC7Q96NW7 1537 aa27.68■■■□□ 2.02
RAB28-202ENST00000330852 IQGAP3Q86VI3 1631 aa27.67■■■□□ 2.02
RAB28-202ENST00000330852 DISP3Q9P2K9 1392 aa27.66■■■□□ 2.02
RAB28-202ENST00000330852 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
RAB28-202ENST00000330852 ITGAEP38570 1179 aa27.63■■■□□ 2.01
RAB28-202ENST00000330852 E9PCH4 1651 aa27.62■■■□□ 2.01
RAB28-202ENST00000330852 HDGFP51858 240 aaKnown RBP27.62■■■□□ 2.01
RAB28-202ENST00000330852 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
RAB28-202ENST00000330852 PIP4K2BP78356 416 aa27.61■■■□□ 2.01
RAB28-202ENST00000330852 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
RAB28-202ENST00000330852 NUP155O75694 1391 aa27.59■■■□□ 2.01
RAB28-202ENST00000330852 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
RAB28-202ENST00000330852 TMEM131LA2VDJ0 1609 aa27.59■■■□□ 2.01
RAB28-202ENST00000330852 ALKQ9UM73 1620 aa27.58■■■□□ 2
RAB28-202ENST00000330852 ZFYVE9O95405 1425 aa27.55■■■□□ 2
RAB28-202ENST00000330852 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms