RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RBM10P98175 930 aaKnown RBP26.35■■□□□ 1.81
CMTM4-201ENST00000330687 NEUROD2Q15784 382 aa26.35■■□□□ 1.81
CMTM4-201ENST00000330687 PANK1Q8TE04 598 aa26.34■■□□□ 1.81
CMTM4-201ENST00000330687 TRAK2O60296 914 aa26.34■■□□□ 1.81
CMTM4-201ENST00000330687 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
CMTM4-201ENST00000330687 ESPNB1AK53 854 aa26.33■■□□□ 1.8
CMTM4-201ENST00000330687 TBC1D2Q9BYX2 928 aa26.33■■□□□ 1.8
CMTM4-201ENST00000330687 DUSP27Q5VZP5 1158 aa26.32■■□□□ 1.8
CMTM4-201ENST00000330687 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
CMTM4-201ENST00000330687 MCM4P33991 863 aa26.31■■□□□ 1.8
CMTM4-201ENST00000330687 NBPF1Q3BBV0 1214 aa26.31■■□□□ 1.8
CMTM4-201ENST00000330687 HECW1Q76N89 1606 aa26.3■■□□□ 1.8
CMTM4-201ENST00000330687 MFAP1P55081 439 aaKnown RBP26.3■■□□□ 1.8
CMTM4-201ENST00000330687 USP19O94966 1318 aa26.29■■□□□ 1.8
CMTM4-201ENST00000330687 CLUAP1Q96AJ1 413 aa26.29■■□□□ 1.8
CMTM4-201ENST00000330687 SUPT6HQ7KZ85 1726 aaKnown RBP26.29■■□□□ 1.8
CMTM4-201ENST00000330687 FOXD4L1Q9NU39 408 aa26.28■■□□□ 1.8
CMTM4-201ENST00000330687 ZBTB7CA1YPR0 619 aa26.27■■□□□ 1.8
CMTM4-201ENST00000330687 BCL2L13Q9BXK5 485 aa26.27■■□□□ 1.8
CMTM4-201ENST00000330687 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
CMTM4-201ENST00000330687 EFCAB5A4FU69 1503 aa26.26■■□□□ 1.79
CMTM4-201ENST00000330687 APAF1O14727 1248 aa26.25■■□□□ 1.79
CMTM4-201ENST00000330687 GRPEL1Q9HAV7 217 aa26.25■■□□□ 1.79
CMTM4-201ENST00000330687 ERBB4Q15303 1308 aa26.24■■□□□ 1.79
CMTM4-201ENST00000330687 PLEKHH1Q9ULM0 1364 aa26.23■■□□□ 1.79
CMTM4-201ENST00000330687 SPINK5Q9NQ38 1064 aaPredicted RBP26.23■■□□□ 1.79
CMTM4-201ENST00000330687 NUP155O75694 1391 aa26.23■■□□□ 1.79
CMTM4-201ENST00000330687 MRE11P49959 708 aa26.23■■□□□ 1.79
CMTM4-201ENST00000330687 FAM13BQ9NYF5 915 aa26.22■■□□□ 1.79
CMTM4-201ENST00000330687 KNSTRNQ9Y448 316 aa26.21■■□□□ 1.79
CMTM4-201ENST00000330687 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
CMTM4-201ENST00000330687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.2■■□□□ 1.79
CMTM4-201ENST00000330687 MAGI3Q5TCQ9 1506 aa26.2■■□□□ 1.79
CMTM4-201ENST00000330687 KIAA1211Q6ZU35 1233 aa26.2■■□□□ 1.78
CMTM4-201ENST00000330687 UGGT2Q9NYU1 1516 aa26.18■■□□□ 1.78
CMTM4-201ENST00000330687 ANTXR1Q9H6X2 564 aa26.18■■□□□ 1.78
CMTM4-201ENST00000330687 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
CMTM4-201ENST00000330687 CDK13Q14004 1512 aaKnown RBP26.18■■□□□ 1.78
CMTM4-201ENST00000330687 PER1O15534 1290 aaPredicted RBP26.18■■□□□ 1.78
CMTM4-201ENST00000330687 DAPK1P53355 1430 aa26.18■■□□□ 1.78
CMTM4-201ENST00000330687 PARD3Q8TEW0 1356 aa26.17■■□□□ 1.78
CMTM4-201ENST00000330687 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
CMTM4-201ENST00000330687 MAPK8IP3Q9UPT6 1336 aa26.14■■□□□ 1.78
CMTM4-201ENST00000330687 ABCC5O15440 1437 aa26.14■■□□□ 1.78
CMTM4-201ENST00000330687 CHMP5Q9NZZ3 219 aa26.13■■□□□ 1.77
CMTM4-201ENST00000330687 KIAA1107Q9UPP5 1409 aa26.13■■□□□ 1.77
CMTM4-201ENST00000330687 FSD2A1L4K1 749 aa26.13■■□□□ 1.77
CMTM4-201ENST00000330687 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
CMTM4-201ENST00000330687 RRP7AQ9Y3A4 280 aaKnown RBP26.12■■□□□ 1.77
CMTM4-201ENST00000330687 SLFN5Q08AF3 891 aa26.11■■□□□ 1.77
CMTM4-201ENST00000330687 PDZRN3Q9UPQ7 1066 aa26.11■■□□□ 1.77
CMTM4-201ENST00000330687 TNNQ9UQP3 1299 aa26.11■■□□□ 1.77
CMTM4-201ENST00000330687 NCLP19338 710 aaKnown RBP26.1■■□□□ 1.77
CMTM4-201ENST00000330687 HSCBQ8IWL3 235 aa26.1■■□□□ 1.77
CMTM4-201ENST00000330687 ANP32BQ92688 251 aaKnown RBP26.1■■□□□ 1.77
CMTM4-201ENST00000330687 TBC1D32Q96NH3 1257 aa26.09■■□□□ 1.77
CMTM4-201ENST00000330687 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
CMTM4-201ENST00000330687 PPP2R1AP30153 589 aa26.08■■□□□ 1.77
CMTM4-201ENST00000330687 TNNT2P45379 298 aaPredicted RBP26.08■■□□□ 1.77
CMTM4-201ENST00000330687 TMF1P82094 1093 aa26.07■■□□□ 1.76
CMTM4-201ENST00000330687 GCC2Q8IWJ2 1684 aa26.07■■□□□ 1.76
CMTM4-201ENST00000330687 C22orf23Q9BZE7 217 aa26.07■■□□□ 1.76
CMTM4-201ENST00000330687 R3HCC1Q9Y3T6 440 aaKnown RBP26.07■■□□□ 1.76
CMTM4-201ENST00000330687 MSNP26038 577 aaKnown RBP26.07■■□□□ 1.76
CMTM4-201ENST00000330687 CENPJQ9HC77 1338 aaPredicted RBP26.06■■□□□ 1.76
CMTM4-201ENST00000330687 GAS2L3Q86XJ1 694 aa26.05■■□□□ 1.76
CMTM4-201ENST00000330687 PRDM10Q9NQV6 1147 aa26.05■■□□□ 1.76
CMTM4-201ENST00000330687 PDCL3Q9H2J4 239 aa26.04■■□□□ 1.76
CMTM4-201ENST00000330687 KDM5CP41229 1560 aa26.04■■□□□ 1.76
CMTM4-201ENST00000330687 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
CMTM4-201ENST00000330687 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
CMTM4-201ENST00000330687 PZPP20742 1482 aa26.04■■□□□ 1.76
CMTM4-201ENST00000330687 CGNL1Q0VF96 1302 aa26.04■■□□□ 1.76
CMTM4-201ENST00000330687 TCOF1Q13428 1488 aaKnown RBP26.03■■□□□ 1.76
CMTM4-201ENST00000330687 PCDHB15Q9Y5E8 787 aa26.02■■□□□ 1.76
CMTM4-201ENST00000330687 DDX11L8A8MPP1 907 aa26.01■■□□□ 1.75
CMTM4-201ENST00000330687 TPM2P07951 284 aa26.01■■□□□ 1.75
CMTM4-201ENST00000330687 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
CMTM4-201ENST00000330687 ROCK1Q13464 1354 aa25.98■■□□□ 1.75
CMTM4-201ENST00000330687 ZHX1Q9UKY1 873 aaPredicted RBP25.97■■□□□ 1.75
CMTM4-201ENST00000330687 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
CMTM4-201ENST00000330687 TSPY4P0CV99 314 aa25.97■■□□□ 1.75
CMTM4-201ENST00000330687 TSPY10P0CW01 314 aa25.97■■□□□ 1.75
CMTM4-201ENST00000330687 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
CMTM4-201ENST00000330687 BLMP54132 1417 aaPredicted RBP25.97■■□□□ 1.75
CMTM4-201ENST00000330687 POLR1AO95602 1720 aaPredicted RBP25.97■■□□□ 1.75
CMTM4-201ENST00000330687 RALGAPBQ86X10 1494 aa25.96■■□□□ 1.75
CMTM4-201ENST00000330687 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
CMTM4-201ENST00000330687 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
CMTM4-201ENST00000330687 E9PSI1 815 aa25.95■■□□□ 1.74
CMTM4-201ENST00000330687 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.74
CMTM4-201ENST00000330687 NASPP49321 788 aaPredicted RBP25.94■■□□□ 1.74
CMTM4-201ENST00000330687 RLBP1P12271 317 aa25.93■■□□□ 1.74
CMTM4-201ENST00000330687 TNPO1Q92973 898 aaKnown RBP25.93■■□□□ 1.74
CMTM4-201ENST00000330687 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
CMTM4-201ENST00000330687 ZMYM4Q5VZL5 1548 aa25.93■■□□□ 1.74
CMTM4-201ENST00000330687 EIF3AQ14152 1382 aaKnown RBP25.93■■□□□ 1.74
CMTM4-201ENST00000330687 MBD5Q9P267 1494 aa25.92■■□□□ 1.74
CMTM4-201ENST00000330687 ANKRD50Q9ULJ7 1429 aa25.92■■□□□ 1.74
CMTM4-201ENST00000330687 FTSJ3Q8IY81 847 aaKnown RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms