RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
CCDC107-201ENST00000327351 GCC2Q8IWJ2 1684 aa25.36■■□□□ 1.65
CCDC107-201ENST00000327351 ANKRD30AQ9BXX3 1397 aa25.35■■□□□ 1.65
CCDC107-201ENST00000327351 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
CCDC107-201ENST00000327351 GGT6Q6P531 493 aa25.33■■□□□ 1.65
CCDC107-201ENST00000327351 CNTLNQ9NXG0 1405 aa25.31■■□□□ 1.64
CCDC107-201ENST00000327351 KIF3BO15066 747 aa25.31■■□□□ 1.64
CCDC107-201ENST00000327351 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
CCDC107-201ENST00000327351 PPP6R1Q9UPN7 881 aa25.29■■□□□ 1.64
CCDC107-201ENST00000327351 KIF15Q9NS87 1388 aa25.27■■□□□ 1.64
CCDC107-201ENST00000327351 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
CCDC107-201ENST00000327351 CEBPAP49715 358 aaPredicted RBP25.24■■□□□ 1.63
CCDC107-201ENST00000327351 ACIN1Q9UKV3 1341 aaKnown RBP25.22■■□□□ 1.63
CCDC107-201ENST00000327351 ZEB1P37275 1124 aaPredicted RBP25.22■■□□□ 1.63
CCDC107-201ENST00000327351 EIF2AK4Q9P2K8 1649 aaKnown RBP25.21■■□□□ 1.63
CCDC107-201ENST00000327351 MROH2AA6NES4 1674 aa25.2■■□□□ 1.63
CCDC107-201ENST00000327351 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
CCDC107-201ENST00000327351 CLTCQ00610 1675 aaKnown RBP25.19■■□□□ 1.62
CCDC107-201ENST00000327351 ERBINQ96RT1 1412 aa25.19■■□□□ 1.62
CCDC107-201ENST00000327351 C3P01024 1663 aa25.18■■□□□ 1.62
CCDC107-201ENST00000327351 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
CCDC107-201ENST00000327351 FAM135AQ9P2D6 1515 aa25.17■■□□□ 1.62
CCDC107-201ENST00000327351 WASHC2CQ9Y4E1 1318 aa25.17■■□□□ 1.62
CCDC107-201ENST00000327351 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
CCDC107-201ENST00000327351 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
CCDC107-201ENST00000327351 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
CCDC107-201ENST00000327351 TRIM52Q96A61 297 aa25.14■■□□□ 1.62
CCDC107-201ENST00000327351 NPATQ14207 1427 aa25.1■■□□□ 1.61
CCDC107-201ENST00000327351 LMTK3Q96Q04 1460 aa25.09■■□□□ 1.61
CCDC107-201ENST00000327351 PREX1Q8TCU6 1659 aa25.09■■□□□ 1.61
CCDC107-201ENST00000327351 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
CCDC107-201ENST00000327351 KANK1Q14678 1352 aa25.07■■□□□ 1.6
CCDC107-201ENST00000327351 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
CCDC107-201ENST00000327351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCDC107-201ENST00000327351 ZC3H13Q5T200 1668 aaKnown RBP25.06■■□□□ 1.6
CCDC107-201ENST00000327351 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
CCDC107-201ENST00000327351 MROH1Q8NDA8 1641 aa25.04■■□□□ 1.6
CCDC107-201ENST00000327351 ABCC3O15438 1527 aa25.04■■□□□ 1.6
CCDC107-201ENST00000327351 PRDM15P57071 1507 aaPredicted RBP25.03■■□□□ 1.6
CCDC107-201ENST00000327351 PZPP20742 1482 aa25.02■■□□□ 1.6
CCDC107-201ENST00000327351 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
CCDC107-201ENST00000327351 HSPA2P54652 639 aa25■■□□□ 1.59
CCDC107-201ENST00000327351 NUP155O75694 1391 aa24.99■■□□□ 1.59
CCDC107-201ENST00000327351 CEP152O94986 1710 aa24.98■■□□□ 1.59
CCDC107-201ENST00000327351 SLC4A1APQ9BWU0 796 aaKnown RBP24.97■■□□□ 1.59
CCDC107-201ENST00000327351 FBXO31Q5XUX0 539 aaPredicted RBP24.96■■□□□ 1.59
CCDC107-201ENST00000327351 UNC13BO14795 1591 aa24.96■■□□□ 1.59
CCDC107-201ENST00000327351 TNRQ92752 1358 aa24.95■■□□□ 1.59
CCDC107-201ENST00000327351 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.58
CCDC107-201ENST00000327351 MYO3AQ8NEV4 1616 aa24.92■■□□□ 1.58
CCDC107-201ENST00000327351 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
CCDC107-201ENST00000327351 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
CCDC107-201ENST00000327351 VWDEQ8N2E2 1590 aa24.91■■□□□ 1.58
CCDC107-201ENST00000327351 SIN3AQ96ST3 1273 aa24.9■■□□□ 1.58
CCDC107-201ENST00000327351 PKD2Q13563 968 aa24.88■■□□□ 1.57
CCDC107-201ENST00000327351 FOXD1Q16676 465 aa24.88■■□□□ 1.57
CCDC107-201ENST00000327351 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
CCDC107-201ENST00000327351 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
CCDC107-201ENST00000327351 SPATA31D1Q6ZQQ2 1576 aa24.87■■□□□ 1.57
CCDC107-201ENST00000327351 ZNF142P52746 1687 aaPredicted RBP24.87■■□□□ 1.57
CCDC107-201ENST00000327351 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
CCDC107-201ENST00000327351 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
CCDC107-201ENST00000327351 NLRP1Q9C000 1473 aa24.85■■□□□ 1.57
CCDC107-201ENST00000327351 ANKRD30BQ9BXX2 1392 aa24.85■■□□□ 1.57
CCDC107-201ENST00000327351 NEUROD1Q13562 356 aa24.84■■□□□ 1.57
CCDC107-201ENST00000327351 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.57
CCDC107-201ENST00000327351 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
CCDC107-201ENST00000327351 TET3O43151 1660 aa24.79■■□□□ 1.56
CCDC107-201ENST00000327351 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
CCDC107-201ENST00000327351 CFAP65Q6ZU64 1925 aaKnown RBP24.78■■□□□ 1.56
CCDC107-201ENST00000327351 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
CCDC107-201ENST00000327351 THEMISQ8N1K5 641 aaPredicted RBP24.78■■□□□ 1.56
CCDC107-201ENST00000327351 PLA2R1Q13018 1463 aa24.76■■□□□ 1.55
CCDC107-201ENST00000327351 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
CCDC107-201ENST00000327351 STRCQ7RTU9 1775 aa24.74■■□□□ 1.55
CCDC107-201ENST00000327351 NOS1P29475 1434 aa24.72■■□□□ 1.55
CCDC107-201ENST00000327351 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
CCDC107-201ENST00000327351 STAG3Q9UJ98 1225 aa24.7■■□□□ 1.54
CCDC107-201ENST00000327351 PTPRTO14522 1441 aa24.69■■□□□ 1.54
CCDC107-201ENST00000327351 SLC52A1Q9NWF4 448 aa24.69■■□□□ 1.54
CCDC107-201ENST00000327351 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
CCDC107-201ENST00000327351 SYNMO15061 1565 aa24.67■■□□□ 1.54
CCDC107-201ENST00000327351 E9PCH4 1651 aa24.67■■□□□ 1.54
CCDC107-201ENST00000327351 ANKLE2Q86XL3 938 aa24.67■■□□□ 1.54
CCDC107-201ENST00000327351 IDI1Q13907 227 aa24.66■■□□□ 1.54
CCDC107-201ENST00000327351 UBR1Q8IWV7 1749 aa24.64■■□□□ 1.54
CCDC107-201ENST00000327351 PIK3C2BO00750 1634 aa24.64■■□□□ 1.53
CCDC107-201ENST00000327351 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
CCDC107-201ENST00000327351 POLR1AO95602 1720 aaPredicted RBP24.61■■□□□ 1.53
CCDC107-201ENST00000327351 KDM5AP29375 1690 aaKnown RBP24.59■■□□□ 1.53
CCDC107-201ENST00000327351 EID1Q9Y6B2 187 aa24.59■■□□□ 1.53
CCDC107-201ENST00000327351 ADGRB3O60242 1522 aa24.58■■□□□ 1.53
CCDC107-201ENST00000327351 L3MBTL2Q969R5 705 aa24.57■■□□□ 1.52
CCDC107-201ENST00000327351 CCDC144AA2RUR9 1427 aa24.56■■□□□ 1.52
CCDC107-201ENST00000327351 CHGAP10645 457 aaKnown RBP24.56■■□□□ 1.52
CCDC107-201ENST00000327351 SLIT1O75093 1534 aa24.56■■□□□ 1.52
CCDC107-201ENST00000327351 TXNDC2Q86VQ3 553 aa24.55■■□□□ 1.52
CCDC107-201ENST00000327351 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
CCDC107-201ENST00000327351 NPHP4O75161 1426 aaPredicted RBP24.54■■□□□ 1.52
CCDC107-201ENST00000327351 ARHGAP23Q9P227 1491 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms