RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
VIPAS39-201ENST00000327028 ATP10AO60312 1499 aa15.14■□□□□ 0.01
VIPAS39-201ENST00000327028 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
VIPAS39-201ENST00000327028 PZPP20742 1482 aa15.13■□□□□ 0.01
VIPAS39-201ENST00000327028 IQGAP3Q86VI3 1631 aa15.13■□□□□ 0.01
VIPAS39-201ENST00000327028 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
VIPAS39-201ENST00000327028 MROH1Q8NDA8 1641 aa15.11■□□□□ 0.01
VIPAS39-201ENST00000327028 NUP155O75694 1391 aa15.1■□□□□ 0.01
VIPAS39-201ENST00000327028 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
VIPAS39-201ENST00000327028 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
VIPAS39-201ENST00000327028 AGLP35573 1532 aa15.09■□□□□ 0.01
VIPAS39-201ENST00000327028 VWDEQ8N2E2 1590 aa15.09■□□□□ 0.01
VIPAS39-201ENST00000327028 KIF3BO15066 747 aa15.08■□□□□ 0
VIPAS39-201ENST00000327028 MPHOSPH9Q99550 1183 aa15.08■□□□□ 0
VIPAS39-201ENST00000327028 SIGLEC1Q9BZZ2 1709 aa15.07■□□□□ 0
VIPAS39-201ENST00000327028 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
VIPAS39-201ENST00000327028 KANK1Q14678 1352 aa15.05■□□□□ 0
VIPAS39-201ENST00000327028 TET3O43151 1660 aa15.04■□□□□ -0
VIPAS39-201ENST00000327028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■■■□ 19.8
VIPAS39-201ENST00000327028 LMTK2Q8IWU2 1503 aa15.04■□□□□ -0
VIPAS39-201ENST00000327028 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
VIPAS39-201ENST00000327028 CEP152O94986 1710 aa15.02■□□□□ -0
VIPAS39-201ENST00000327028 ABCC3O15438 1527 aa15.01□□□□□ -0.01
VIPAS39-201ENST00000327028 PKD2Q13563 968 aa15□□□□□ -0.01
VIPAS39-201ENST00000327028 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
VIPAS39-201ENST00000327028 E9PCH4 1651 aa15□□□□□ -0.01
VIPAS39-201ENST00000327028 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-201ENST00000327028 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
VIPAS39-201ENST00000327028 GGT6Q6P531 493 aa14.98□□□□□ -0.01
VIPAS39-201ENST00000327028 CAMSAP1Q5T5Y3 1602 aa14.98□□□□□ -0.01
VIPAS39-201ENST00000327028 FOXD1Q16676 465 aa14.97□□□□□ -0.01
VIPAS39-201ENST00000327028 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
VIPAS39-201ENST00000327028 RPRD2Q5VT52 1461 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-201ENST00000327028 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
VIPAS39-201ENST00000327028 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
VIPAS39-201ENST00000327028 CLTCQ00610 1675 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-201ENST00000327028 TRPM2O94759 1503 aa14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 PTPRTO14522 1441 aa14.92□□□□□ -0.02
VIPAS39-201ENST00000327028 NPATQ14207 1427 aa14.91□□□□□ -0.02
VIPAS39-201ENST00000327028 MROH2AA6NES4 1674 aa14.89□□□□□ -0.03
VIPAS39-201ENST00000327028 MLECQ14165 292 aa14.89□□□□□ -0.03
VIPAS39-201ENST00000327028 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
VIPAS39-201ENST00000327028 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
VIPAS39-201ENST00000327028 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
VIPAS39-201ENST00000327028 FER1L4A9Z1Z3 1794 aa14.87□□□□□ -0.03
VIPAS39-201ENST00000327028 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
VIPAS39-201ENST00000327028 PREX1Q8TCU6 1659 aa14.87□□□□□ -0.03
VIPAS39-201ENST00000327028 CLTCL1P53675 1640 aa14.86□□□□□ -0.03
VIPAS39-201ENST00000327028 NOS1P29475 1434 aa14.85□□□□□ -0.03
VIPAS39-201ENST00000327028 TONSLQ96HA7 1378 aa14.84□□□□□ -0.03
VIPAS39-201ENST00000327028 SYNMO15061 1565 aa14.84□□□□□ -0.03
VIPAS39-201ENST00000327028 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-201ENST00000327028 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.03
VIPAS39-201ENST00000327028 ERVK-7P63135 1459 aa14.83□□□□□ -0.03
VIPAS39-201ENST00000327028 PIK3C2BO00750 1634 aa14.83□□□□□ -0.04
VIPAS39-201ENST00000327028 ADAMTSL3P82987 1691 aa14.83□□□□□ -0.04
VIPAS39-201ENST00000327028 SPATA31D1Q6ZQQ2 1576 aa14.82□□□□□ -0.04
VIPAS39-201ENST00000327028 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
VIPAS39-201ENST00000327028 UGGT1Q9NYU2 1555 aa14.82□□□□□ -0.04
VIPAS39-201ENST00000327028 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
VIPAS39-201ENST00000327028 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
VIPAS39-201ENST00000327028 KIF1BO60333 1816 aa14.8□□□□□ -0.04
VIPAS39-201ENST00000327028 C3P01024 1663 aa14.8□□□□□ -0.04
VIPAS39-201ENST00000327028 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-201ENST00000327028 SPATA31E1Q6ZUB1 1445 aa14.78□□□□□ -0.04
VIPAS39-201ENST00000327028 ADGRB3O60242 1522 aa14.78□□□□□ -0.04
VIPAS39-201ENST00000327028 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
VIPAS39-201ENST00000327028 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-201ENST00000327028 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-201ENST00000327028 SLC52A1Q9NWF4 448 aa14.74□□□□□ -0.05
VIPAS39-201ENST00000327028 TNRQ92752 1358 aa14.73□□□□□ -0.05
VIPAS39-201ENST00000327028 IFT172Q9UG01 1749 aa14.72□□□□□ -0.05
VIPAS39-201ENST00000327028 TMEM131LA2VDJ0 1609 aa14.72□□□□□ -0.05
VIPAS39-201ENST00000327028 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
VIPAS39-201ENST00000327028 KDM5AP29375 1690 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-201ENST00000327028 IDI1Q13907 227 aa14.7□□□□□ -0.06
VIPAS39-201ENST00000327028 MYO5BQ9ULV0 1848 aa14.7□□□□□ -0.06
VIPAS39-201ENST00000327028 RGL3Q3MIN7 710 aa14.69□□□□□ -0.06
VIPAS39-201ENST00000327028 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
VIPAS39-201ENST00000327028 PPLO60437 1756 aa14.69□□□□□ -0.06
VIPAS39-201ENST00000327028 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-201ENST00000327028 MYOM2P54296 1465 aa14.68□□□□□ -0.06
VIPAS39-201ENST00000327028 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
VIPAS39-201ENST00000327028 MYO3AQ8NEV4 1616 aa14.68□□□□□ -0.06
VIPAS39-201ENST00000327028 NEXMIFQ5QGS0 1516 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 STAC3Q96MF2 364 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 PTPRMP28827 1452 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 PRAG1Q86YV5 1406 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 UBR1Q8IWV7 1749 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 A2ML1A8K2U0 1454 aa14.66□□□□□ -0.06
VIPAS39-201ENST00000327028 RPGRIP1LQ68CZ1 1315 aa14.65□□□□□ -0.06
VIPAS39-201ENST00000327028 RALGAPBQ86X10 1494 aa14.64□□□□□ -0.07
VIPAS39-201ENST00000327028 NBPF8Q3BBV2 869 aa14.64□□□□□ -0.07
VIPAS39-201ENST00000327028 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-201ENST00000327028 TRPM1Q7Z4N2 1603 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms