RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
FRAS1-201ENST00000325942 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
FRAS1-201ENST00000325942 FOSBP53539 338 aa12.01□□□□□ -0.49
FRAS1-201ENST00000325942 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
FRAS1-201ENST00000325942 CCDC27Q2M243 656 aa12□□□□□ -0.49
FRAS1-201ENST00000325942 STK31Q9BXU1 1019 aa12□□□□□ -0.49
FRAS1-201ENST00000325942 PSME1Q06323 249 aa11.99□□□□□ -0.49
FRAS1-201ENST00000325942 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
FRAS1-201ENST00000325942 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
FRAS1-201ENST00000325942 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
FRAS1-201ENST00000325942 TMF1P82094 1093 aa11.98□□□□□ -0.49
FRAS1-201ENST00000325942 STRN4Q9NRL3 753 aa11.98□□□□□ -0.49
FRAS1-201ENST00000325942 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
FRAS1-201ENST00000325942 AK7Q96M32 723 aa11.98□□□□□ -0.49
FRAS1-201ENST00000325942 ZFYVE27Q5T4F4 411 aa11.97□□□□□ -0.49
FRAS1-201ENST00000325942 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
FRAS1-201ENST00000325942 STK11IPQ8N1F8 1099 aa11.96□□□□□ -0.49
FRAS1-201ENST00000325942 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.5
FRAS1-201ENST00000325942 ATF3P18847 181 aa11.95□□□□□ -0.5
FRAS1-201ENST00000325942 ATP2B2Q01814 1243 aa11.95□□□□□ -0.5
FRAS1-201ENST00000325942 R3HCC1Q9Y3T6 440 aaKnown RBP11.95□□□□□ -0.5
FRAS1-201ENST00000325942 CCDC97Q96F63 343 aaPredicted RBP11.95□□□□□ -0.5
FRAS1-201ENST00000325942 RBM5P52756 815 aaKnown RBP eCLIP11.95□□□□□ -0.5
FRAS1-201ENST00000325942 ELL2O00472 640 aaPredicted RBP11.94□□□□□ -0.5
FRAS1-201ENST00000325942 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
FRAS1-201ENST00000325942 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
FRAS1-201ENST00000325942 RILPL2Q969X0 211 aa11.94□□□□□ -0.5
FRAS1-201ENST00000325942 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
FRAS1-201ENST00000325942 CA8P35219 290 aa11.93□□□□□ -0.5
FRAS1-201ENST00000325942 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
FRAS1-201ENST00000325942 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
FRAS1-201ENST00000325942 KIF3BO15066 747 aa11.93□□□□□ -0.5
FRAS1-201ENST00000325942 TPM4P67936 248 aa11.93□□□□□ -0.5
FRAS1-201ENST00000325942 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
FRAS1-201ENST00000325942 MSNP26038 577 aaKnown RBP11.93□□□□□ -0.5
FRAS1-201ENST00000325942 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
FRAS1-201ENST00000325942 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
FRAS1-201ENST00000325942 MCTP1Q6DN14 999 aa11.92□□□□□ -0.5
FRAS1-201ENST00000325942 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
FRAS1-201ENST00000325942 ODF2Q5BJF6 829 aa11.9□□□□□ -0.5
FRAS1-201ENST00000325942 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
FRAS1-201ENST00000325942 H3BQV1 296 aa11.9□□□□□ -0.5
FRAS1-201ENST00000325942 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
FRAS1-201ENST00000325942 TRAK1Q9UPV9 953 aa11.89□□□□□ -0.51
FRAS1-201ENST00000325942 MIER1Q8N108 512 aa11.89□□□□□ -0.51
FRAS1-201ENST00000325942 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
FRAS1-201ENST00000325942 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
FRAS1-201ENST00000325942 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
FRAS1-201ENST00000325942 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
FRAS1-201ENST00000325942 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
FRAS1-201ENST00000325942 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
FRAS1-201ENST00000325942 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
FRAS1-201ENST00000325942 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
FRAS1-201ENST00000325942 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
FRAS1-201ENST00000325942 MS4A1P11836 297 aa11.88□□□□□ -0.51
FRAS1-201ENST00000325942 ZNF219Q9P2Y4 722 aaPredicted RBP11.88□□□□□ -0.51
FRAS1-201ENST00000325942 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
FRAS1-201ENST00000325942 NFXL1Q6ZNB6 911 aa11.87□□□□□ -0.51
FRAS1-201ENST00000325942 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
FRAS1-201ENST00000325942 SMC4Q9NTJ3 1288 aa11.87□□□□□ -0.51
FRAS1-201ENST00000325942 TPM3P06753 285 aa11.86□□□□□ -0.51
FRAS1-201ENST00000325942 TTC16Q8NEE8 873 aa11.86□□□□□ -0.51
FRAS1-201ENST00000325942 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
FRAS1-201ENST00000325942 HNRNPMP52272 730 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 19
FRAS1-201ENST00000325942 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
FRAS1-201ENST00000325942 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
FRAS1-201ENST00000325942 TEFQ10587 303 aa11.85□□□□□ -0.51
FRAS1-201ENST00000325942 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
FRAS1-201ENST00000325942 TPM2P07951 284 aa11.84□□□□□ -0.51
FRAS1-201ENST00000325942 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
FRAS1-201ENST00000325942 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
FRAS1-201ENST00000325942 CLIP1P30622 1438 aa11.84□□□□□ -0.51
FRAS1-201ENST00000325942 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
FRAS1-201ENST00000325942 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
FRAS1-201ENST00000325942 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
FRAS1-201ENST00000325942 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
FRAS1-201ENST00000325942 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
FRAS1-201ENST00000325942 ROCK2O75116 1388 aaKnown RBP11.82□□□□□ -0.52
FRAS1-201ENST00000325942 IPO8O15397 1037 aaKnown RBP11.81□□□□□ -0.52
FRAS1-201ENST00000325942 MATR3P43243 847 aaKnown RBP eCLIP11.81□□□□□ -0.526e-7■■■■□ 25
FRAS1-201ENST00000325942 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
FRAS1-201ENST00000325942 MINK1Q8N4C8 1332 aaPredicted RBP11.81□□□□□ -0.52
FRAS1-201ENST00000325942 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
FRAS1-201ENST00000325942 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
FRAS1-201ENST00000325942 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
FRAS1-201ENST00000325942 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
FRAS1-201ENST00000325942 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
FRAS1-201ENST00000325942 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
FRAS1-201ENST00000325942 EPS15P42566 896 aa11.8□□□□□ -0.52
FRAS1-201ENST00000325942 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
FRAS1-201ENST00000325942 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
FRAS1-201ENST00000325942 TRIM29Q14134 588 aa11.79□□□□□ -0.52
FRAS1-201ENST00000325942 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
FRAS1-201ENST00000325942 ERICH2A1L162 156 aa11.79□□□□□ -0.52
FRAS1-201ENST00000325942 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.79□□□□□ -0.52
FRAS1-201ENST00000325942 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
FRAS1-201ENST00000325942 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
FRAS1-201ENST00000325942 BCL2L13Q9BXK5 485 aa11.78□□□□□ -0.52
FRAS1-201ENST00000325942 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
FRAS1-201ENST00000325942 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms