RNA–Protein interactions for RNA: ENST00000324954.10

SMARCA2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 1,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-202ENST00000324954 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
SMARCA2-202ENST00000324954 ATP10AO60312 1499 aa13.11□□□□□ -0.31
SMARCA2-202ENST00000324954 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
SMARCA2-202ENST00000324954 A2MP01023 1474 aa13.1□□□□□ -0.31
SMARCA2-202ENST00000324954 DHX29Q7Z478 1369 aaKnown RBP13.08□□□□□ -0.32
SMARCA2-202ENST00000324954 NAIPQ13075 1403 aa13.08□□□□□ -0.32
SMARCA2-202ENST00000324954 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
SMARCA2-202ENST00000324954 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
SMARCA2-202ENST00000324954 HFM1A2PYH4 1435 aa13.07□□□□□ -0.32
SMARCA2-202ENST00000324954 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
SMARCA2-202ENST00000324954 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
SMARCA2-202ENST00000324954 ERBINQ96RT1 1412 aa13.04□□□□□ -0.32
SMARCA2-202ENST00000324954 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
SMARCA2-202ENST00000324954 AGLP35573 1532 aa13.03□□□□□ -0.32
SMARCA2-202ENST00000324954 KIF3BO15066 747 aa13.03□□□□□ -0.32
SMARCA2-202ENST00000324954 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-202ENST00000324954 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-202ENST00000324954 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.33
SMARCA2-202ENST00000324954 MLECQ14165 292 aa13.02□□□□□ -0.33
SMARCA2-202ENST00000324954 SCAF1Q9H7N4 1312 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-202ENST00000324954 MROH1Q8NDA8 1641 aa13.01□□□□□ -0.33
SMARCA2-202ENST00000324954 GGT6Q6P531 493 aa13□□□□□ -0.33
SMARCA2-202ENST00000324954 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
SMARCA2-202ENST00000324954 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
SMARCA2-202ENST00000324954 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
SMARCA2-202ENST00000324954 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
SMARCA2-202ENST00000324954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA2-202ENST00000324954 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-202ENST00000324954 UNC13BO14795 1591 aa12.96□□□□□ -0.33
SMARCA2-202ENST00000324954 ADAMTSL3P82987 1691 aa12.95□□□□□ -0.34
SMARCA2-202ENST00000324954 MADDQ8WXG6 1647 aa12.94□□□□□ -0.34
SMARCA2-202ENST00000324954 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
SMARCA2-202ENST00000324954 FER1L4A9Z1Z3 1794 aa12.94□□□□□ -0.34
SMARCA2-202ENST00000324954 CEP152O94986 1710 aa12.93□□□□□ -0.34
SMARCA2-202ENST00000324954 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
SMARCA2-202ENST00000324954 NUP155O75694 1391 aa12.93□□□□□ -0.34
SMARCA2-202ENST00000324954 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-202ENST00000324954 ABCC3O15438 1527 aa12.92□□□□□ -0.34
SMARCA2-202ENST00000324954 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
SMARCA2-202ENST00000324954 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
SMARCA2-202ENST00000324954 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
SMARCA2-202ENST00000324954 TRIM52Q96A61 297 aa12.91□□□□□ -0.34
SMARCA2-202ENST00000324954 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
SMARCA2-202ENST00000324954 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-202ENST00000324954 PZPP20742 1482 aa12.9□□□□□ -0.34
SMARCA2-202ENST00000324954 RIMS1Q86UR5 1692 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-202ENST00000324954 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-202ENST00000324954 HRCP23327 699 aa12.89□□□□□ -0.35
SMARCA2-202ENST00000324954 KANK1Q14678 1352 aa12.88□□□□□ -0.35
SMARCA2-202ENST00000324954 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
SMARCA2-202ENST00000324954 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
SMARCA2-202ENST00000324954 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
SMARCA2-202ENST00000324954 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
SMARCA2-202ENST00000324954 TET3O43151 1660 aa12.87□□□□□ -0.35
SMARCA2-202ENST00000324954 C3P01024 1663 aa12.87□□□□□ -0.35
SMARCA2-202ENST00000324954 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 E9PCH4 1651 aa12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
SMARCA2-202ENST00000324954 NPATQ14207 1427 aa12.85□□□□□ -0.35
SMARCA2-202ENST00000324954 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
SMARCA2-202ENST00000324954 PTPRMP28827 1452 aa12.85□□□□□ -0.35
SMARCA2-202ENST00000324954 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-202ENST00000324954 PKD2Q13563 968 aa12.84□□□□□ -0.35
SMARCA2-202ENST00000324954 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.36
SMARCA2-202ENST00000324954 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
SMARCA2-202ENST00000324954 PREX1Q8TCU6 1659 aa12.81□□□□□ -0.36
SMARCA2-202ENST00000324954 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-202ENST00000324954 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-202ENST00000324954 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-202ENST00000324954 ERVK-7P63135 1459 aa12.79□□□□□ -0.36
SMARCA2-202ENST00000324954 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
SMARCA2-202ENST00000324954 SYNMO15061 1565 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 SPHKAPQ2M3C7 1700 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 BCANQ96GW7 911 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 NOS1P29475 1434 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 UGGT1Q9NYU2 1555 aa12.78□□□□□ -0.36
SMARCA2-202ENST00000324954 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-202ENST00000324954 PTPRTO14522 1441 aa12.76□□□□□ -0.37
SMARCA2-202ENST00000324954 TNRQ92752 1358 aa12.74□□□□□ -0.37
SMARCA2-202ENST00000324954 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
SMARCA2-202ENST00000324954 TRPM2O94759 1503 aa12.74□□□□□ -0.37
SMARCA2-202ENST00000324954 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
SMARCA2-202ENST00000324954 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-202ENST00000324954 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
SMARCA2-202ENST00000324954 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
SMARCA2-202ENST00000324954 IDI1Q13907 227 aa12.72□□□□□ -0.37
SMARCA2-202ENST00000324954 MYO5BQ9ULV0 1848 aa12.7□□□□□ -0.38
SMARCA2-202ENST00000324954 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
SMARCA2-202ENST00000324954 CCDC144AA2RUR9 1427 aa12.69□□□□□ -0.38
SMARCA2-202ENST00000324954 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
SMARCA2-202ENST00000324954 SLC52A1Q9NWF4 448 aa12.69□□□□□ -0.38
SMARCA2-202ENST00000324954 NLRP1Q9C000 1473 aa12.69□□□□□ -0.38
SMARCA2-202ENST00000324954 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
SMARCA2-202ENST00000324954 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
SMARCA2-202ENST00000324954 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms