RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GGT6Q6P531 493 aa22.51■■□□□ 1.19
PRPF3-201ENST00000324862 ATP10AO60312 1499 aa22.49■■□□□ 1.19
PRPF3-201ENST00000324862 SIGLEC1Q9BZZ2 1709 aa22.47■■□□□ 1.19
PRPF3-201ENST00000324862 ARHGEF40Q8TER5 1519 aa22.46■■□□□ 1.19
PRPF3-201ENST00000324862 UNC13BO14795 1591 aa22.46■■□□□ 1.19
PRPF3-201ENST00000324862 PKD2Q13563 968 aa22.45■■□□□ 1.18
PRPF3-201ENST00000324862 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
PRPF3-201ENST00000324862 FAM135AQ9P2D6 1515 aa22.44■■□□□ 1.18
PRPF3-201ENST00000324862 MLECQ14165 292 aa22.44■■□□□ 1.18
PRPF3-201ENST00000324862 MROH1Q8NDA8 1641 aa22.43■■□□□ 1.18
PRPF3-201ENST00000324862 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
PRPF3-201ENST00000324862 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
PRPF3-201ENST00000324862 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
PRPF3-201ENST00000324862 ARID4BQ4LE39 1312 aaPredicted RBP22.39■■□□□ 1.17
PRPF3-201ENST00000324862 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
PRPF3-201ENST00000324862 PRDM15P57071 1507 aaPredicted RBP22.37■■□□□ 1.17
PRPF3-201ENST00000324862 IQGAP3Q86VI3 1631 aa22.37■■□□□ 1.17
PRPF3-201ENST00000324862 RNF17Q9BXT8 1623 aaKnown RBP22.36■■□□□ 1.17
PRPF3-201ENST00000324862 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
PRPF3-201ENST00000324862 REREQ9P2R6 1566 aa22.35■■□□□ 1.17
PRPF3-201ENST00000324862 KANK1Q14678 1352 aa22.35■■□□□ 1.17
PRPF3-201ENST00000324862 WASHC2CQ9Y4E1 1318 aa22.35■■□□□ 1.17
PRPF3-201ENST00000324862 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
PRPF3-201ENST00000324862 BCORL1Q5H9F3 1711 aa22.33■■□□□ 1.16
PRPF3-201ENST00000324862 AGLP35573 1532 aa22.32■■□□□ 1.16
PRPF3-201ENST00000324862 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
PRPF3-201ENST00000324862 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
PRPF3-201ENST00000324862 CEP152O94986 1710 aa22.29■■□□□ 1.16
PRPF3-201ENST00000324862 ABCC3O15438 1527 aa22.29■■□□□ 1.16
PRPF3-201ENST00000324862 PLA2R1Q13018 1463 aa22.27■■□□□ 1.15
PRPF3-201ENST00000324862 E9PCH4 1651 aa22.26■■□□□ 1.15
PRPF3-201ENST00000324862 NPATQ14207 1427 aa22.24■■□□□ 1.15
PRPF3-201ENST00000324862 TET3O43151 1660 aa22.24■■□□□ 1.15
PRPF3-201ENST00000324862 EFCAB6Q5THR3 1501 aa22.23■■□□□ 1.15
PRPF3-201ENST00000324862 LMTK2Q8IWU2 1503 aa22.23■■□□□ 1.15
PRPF3-201ENST00000324862 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
PRPF3-201ENST00000324862 FBXO31Q5XUX0 539 aaPredicted RBP22.19■■□□□ 1.14
PRPF3-201ENST00000324862 CAMSAP1Q5T5Y3 1602 aa22.18■■□□□ 1.14
PRPF3-201ENST00000324862 CLTCQ00610 1675 aaKnown RBP22.18■■□□□ 1.14
PRPF3-201ENST00000324862 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
PRPF3-201ENST00000324862 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
PRPF3-201ENST00000324862 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
PRPF3-201ENST00000324862 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
PRPF3-201ENST00000324862 RPRD2Q5VT52 1461 aaKnown RBP22.16■■□□□ 1.14
PRPF3-201ENST00000324862 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
PRPF3-201ENST00000324862 PTPRTO14522 1441 aa22.14■■□□□ 1.14
PRPF3-201ENST00000324862 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
PRPF3-201ENST00000324862 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.13
PRPF3-201ENST00000324862 ZC3H13Q5T200 1668 aaKnown RBP22.13■■□□□ 1.13
PRPF3-201ENST00000324862 TONSLQ96HA7 1378 aa22.13■■□□□ 1.13
PRPF3-201ENST00000324862 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
PRPF3-201ENST00000324862 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
PRPF3-201ENST00000324862 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
PRPF3-201ENST00000324862 ARHGAP31Q2M1Z3 1444 aa22.11■■□□□ 1.13
PRPF3-201ENST00000324862 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
PRPF3-201ENST00000324862 TRPM2O94759 1503 aa22.1■■□□□ 1.13
PRPF3-201ENST00000324862 NOS1P29475 1434 aa22.08■■□□□ 1.12
PRPF3-201ENST00000324862 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
PRPF3-201ENST00000324862 SYNMO15061 1565 aa22.06■■□□□ 1.12
PRPF3-201ENST00000324862 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
PRPF3-201ENST00000324862 ERVK-7P63135 1459 aa22.04■■□□□ 1.12
PRPF3-201ENST00000324862 CHGAP10645 457 aaKnown RBP22.04■■□□□ 1.12
PRPF3-201ENST00000324862 IDI1Q13907 227 aa22.04■■□□□ 1.12
PRPF3-201ENST00000324862 CNTLNQ9NXG0 1405 aa22.03■■□□□ 1.12
PRPF3-201ENST00000324862 FER1L4A9Z1Z3 1794 aa22.03■■□□□ 1.12
PRPF3-201ENST00000324862 PREX1Q8TCU6 1659 aa22.02■■□□□ 1.12
PRPF3-201ENST00000324862 PPP1R15AO75807 674 aaPredicted RBP22.02■■□□□ 1.12
PRPF3-201ENST00000324862 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
PRPF3-201ENST00000324862 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
PRPF3-201ENST00000324862 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
PRPF3-201ENST00000324862 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
PRPF3-201ENST00000324862 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
PRPF3-201ENST00000324862 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
PRPF3-201ENST00000324862 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
PRPF3-201ENST00000324862 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
PRPF3-201ENST00000324862 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
PRPF3-201ENST00000324862 C3P01024 1663 aa21.96■■□□□ 1.11
PRPF3-201ENST00000324862 SLC52A1Q9NWF4 448 aa21.94■■□□□ 1.1
PRPF3-201ENST00000324862 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
PRPF3-201ENST00000324862 PIK3C2BO00750 1634 aa21.94■■□□□ 1.1
PRPF3-201ENST00000324862 NUTM2DQ5VT03 806 aaPredicted RBP21.93■■□□□ 1.1
PRPF3-201ENST00000324862 TNRQ92752 1358 aa21.93■■□□□ 1.1
PRPF3-201ENST00000324862 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
PRPF3-201ENST00000324862 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
PRPF3-201ENST00000324862 KDM4FA0A1W2PPD8 638 aa21.88■■□□□ 1.09
PRPF3-201ENST00000324862 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
PRPF3-201ENST00000324862 KIF1BO60333 1816 aa21.87■■□□□ 1.09
PRPF3-201ENST00000324862 PTPRMP28827 1452 aa21.86■■□□□ 1.09
PRPF3-201ENST00000324862 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
PRPF3-201ENST00000324862 ADGRF5Q8IZF2 1346 aa21.84■■□□□ 1.09
PRPF3-201ENST00000324862 MYO5BQ9ULV0 1848 aa21.83■■□□□ 1.08
PRPF3-201ENST00000324862 A2ML1A8K2U0 1454 aa21.82■■□□□ 1.08
PRPF3-201ENST00000324862 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
PRPF3-201ENST00000324862 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
PRPF3-201ENST00000324862 NBPF1Q3BBV0 1214 aa21.79■■□□□ 1.08
PRPF3-201ENST00000324862 NEURL4Q96JN8 1562 aa21.79■■□□□ 1.08
PRPF3-201ENST00000324862 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
PRPF3-201ENST00000324862 NEXMIFQ5QGS0 1516 aa21.77■■□□□ 1.08
PRPF3-201ENST00000324862 NLRP1Q9C000 1473 aa21.76■■□□□ 1.07
PRPF3-201ENST00000324862 MYO3AQ8NEV4 1616 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms