RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 RNF17Q9BXT8 1623 aaKnown RBP23.68■■□□□ 1.38
TSFM-201ENST00000323833 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
TSFM-201ENST00000323833 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
TSFM-201ENST00000323833 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
TSFM-201ENST00000323833 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
TSFM-201ENST00000323833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.66■■□□□ 1.38
TSFM-201ENST00000323833 ITGAEP38570 1179 aa23.66■■□□□ 1.38
TSFM-201ENST00000323833 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
TSFM-201ENST00000323833 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
TSFM-201ENST00000323833 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
TSFM-201ENST00000323833 CEP152O94986 1710 aa23.62■■□□□ 1.37
TSFM-201ENST00000323833 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
TSFM-201ENST00000323833 KDM5DQ9BY66 1539 aa23.6■■□□□ 1.37
TSFM-201ENST00000323833 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
TSFM-201ENST00000323833 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
TSFM-201ENST00000323833 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
TSFM-201ENST00000323833 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
TSFM-201ENST00000323833 FAM135AQ9P2D6 1515 aa23.57■■□□□ 1.36
TSFM-201ENST00000323833 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
TSFM-201ENST00000323833 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
TSFM-201ENST00000323833 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
TSFM-201ENST00000323833 LMTK3Q96Q04 1460 aa23.55■■□□□ 1.36
TSFM-201ENST00000323833 PRDM15P57071 1507 aaPredicted RBP23.54■■□□□ 1.36
TSFM-201ENST00000323833 ABCC3O15438 1527 aa23.54■■□□□ 1.36
TSFM-201ENST00000323833 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
TSFM-201ENST00000323833 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
TSFM-201ENST00000323833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
TSFM-201ENST00000323833 NPATQ14207 1427 aa23.49■■□□□ 1.35
TSFM-201ENST00000323833 PZPP20742 1482 aa23.47■■□□□ 1.35
TSFM-201ENST00000323833 UHRF1BP1Q6BDS2 1440 aa23.46■■□□□ 1.35
TSFM-201ENST00000323833 VWDEQ8N2E2 1590 aa23.46■■□□□ 1.35
TSFM-201ENST00000323833 GCC2Q8IWJ2 1684 aa23.45■■□□□ 1.34
TSFM-201ENST00000323833 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.34
TSFM-201ENST00000323833 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
TSFM-201ENST00000323833 UNC13BO14795 1591 aa23.44■■□□□ 1.34
TSFM-201ENST00000323833 KANK1Q14678 1352 aa23.44■■□□□ 1.34
TSFM-201ENST00000323833 HSPA2P54652 639 aa23.44■■□□□ 1.34
TSFM-201ENST00000323833 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
TSFM-201ENST00000323833 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
TSFM-201ENST00000323833 NAIPQ13075 1403 aa23.38■■□□□ 1.33
TSFM-201ENST00000323833 SPATA31D1Q6ZQQ2 1576 aa23.37■■□□□ 1.33
TSFM-201ENST00000323833 TNRQ92752 1358 aa23.37■■□□□ 1.33
TSFM-201ENST00000323833 CEP170BQ9Y4F5 1589 aaPredicted RBP23.36■■□□□ 1.33
TSFM-201ENST00000323833 TET3O43151 1660 aa23.36■■□□□ 1.33
TSFM-201ENST00000323833 IQGAP3Q86VI3 1631 aa23.36■■□□□ 1.33
TSFM-201ENST00000323833 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
TSFM-201ENST00000323833 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
TSFM-201ENST00000323833 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
TSFM-201ENST00000323833 STRCQ7RTU9 1775 aa23.34■■□□□ 1.33
TSFM-201ENST00000323833 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
TSFM-201ENST00000323833 E9PCH4 1651 aa23.31■■□□□ 1.32
TSFM-201ENST00000323833 A2ML1A8K2U0 1454 aa23.3■■□□□ 1.32
TSFM-201ENST00000323833 NUP155O75694 1391 aa23.29■■□□□ 1.32
TSFM-201ENST00000323833 NLRP1Q9C000 1473 aa23.27■■□□□ 1.32
TSFM-201ENST00000323833 SYNMO15061 1565 aa23.25■■□□□ 1.31
TSFM-201ENST00000323833 UBR1Q8IWV7 1749 aa23.24■■□□□ 1.31
TSFM-201ENST00000323833 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
TSFM-201ENST00000323833 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
TSFM-201ENST00000323833 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
TSFM-201ENST00000323833 NOS1P29475 1434 aa23.22■■□□□ 1.31
TSFM-201ENST00000323833 POLR1AO95602 1720 aaPredicted RBP23.2■■□□□ 1.3
TSFM-201ENST00000323833 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
TSFM-201ENST00000323833 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
TSFM-201ENST00000323833 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
TSFM-201ENST00000323833 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
TSFM-201ENST00000323833 NCKAP5LQ9HCH0 1330 aa23.16■■□□□ 1.3
TSFM-201ENST00000323833 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
TSFM-201ENST00000323833 THEMISQ8N1K5 641 aaPredicted RBP23.15■■□□□ 1.3
TSFM-201ENST00000323833 IDI1Q13907 227 aa23.14■■□□□ 1.29
TSFM-201ENST00000323833 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
TSFM-201ENST00000323833 PKD2Q13563 968 aa23.1■■□□□ 1.29
TSFM-201ENST00000323833 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
TSFM-201ENST00000323833 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
TSFM-201ENST00000323833 PTPRTO14522 1441 aa23.09■■□□□ 1.29
TSFM-201ENST00000323833 ADGRB3O60242 1522 aa23.09■■□□□ 1.29
TSFM-201ENST00000323833 SLC52A1Q9NWF4 448 aa23.09■■□□□ 1.29
TSFM-201ENST00000323833 STAG3Q9UJ98 1225 aa23.09■■□□□ 1.29
TSFM-201ENST00000323833 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
TSFM-201ENST00000323833 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
TSFM-201ENST00000323833 TMEM131LA2VDJ0 1609 aa23.07■■□□□ 1.28
TSFM-201ENST00000323833 ANKLE2Q86XL3 938 aa23.06■■□□□ 1.28
TSFM-201ENST00000323833 SLIT1O75093 1534 aa23.05■■□□□ 1.28
TSFM-201ENST00000323833 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
TSFM-201ENST00000323833 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
TSFM-201ENST00000323833 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
TSFM-201ENST00000323833 KIF1BO60333 1816 aa23.02■■□□□ 1.28
TSFM-201ENST00000323833 TRPM2O94759 1503 aa23.02■■□□□ 1.28
TSFM-201ENST00000323833 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
TSFM-201ENST00000323833 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
TSFM-201ENST00000323833 LTKP29376 864 aa23■■□□□ 1.27
TSFM-201ENST00000323833 FOXD1Q16676 465 aa23■■□□□ 1.27
TSFM-201ENST00000323833 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
TSFM-201ENST00000323833 MED14O60244 1454 aa22.99■■□□□ 1.27
TSFM-201ENST00000323833 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
TSFM-201ENST00000323833 NPHP4O75161 1426 aaPredicted RBP22.99■■□□□ 1.27
TSFM-201ENST00000323833 TXNDC2Q86VQ3 553 aa22.98■■□□□ 1.27
TSFM-201ENST00000323833 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
TSFM-201ENST00000323833 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
TSFM-201ENST00000323833 ZFYVE9O95405 1425 aa22.92■■□□□ 1.26
TSFM-201ENST00000323833 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms