RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 CEP170BQ9Y4F5 1589 aaPredicted RBP29.43■■■□□ 2.3
TYMS-201ENST00000323224 CERKQ8TCT0 537 aa29.42■■■□□ 2.3
TYMS-201ENST00000323224 CROCC2H7BZ55 1655 aa29.41■■■□□ 2.3
TYMS-201ENST00000323224 FBXO31Q5XUX0 539 aaPredicted RBP29.41■■■□□ 2.3
TYMS-201ENST00000323224 DMRT2Q9Y5R5 561 aa29.41■■■□□ 2.3
TYMS-201ENST00000323224 PTPRTO14522 1441 aa29.39■■■□□ 2.3
TYMS-201ENST00000323224 RNF17Q9BXT8 1623 aaKnown RBP29.39■■■□□ 2.3
TYMS-201ENST00000323224 ABCC5O15440 1437 aa29.39■■■□□ 2.29
TYMS-201ENST00000323224 FGD6Q6ZV73 1430 aa29.39■■■□□ 2.29
TYMS-201ENST00000323224 WASHC2CQ9Y4E1 1318 aa29.38■■■□□ 2.29
TYMS-201ENST00000323224 FAM135AQ9P2D6 1515 aa29.37■■■□□ 2.29
TYMS-201ENST00000323224 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
TYMS-201ENST00000323224 PZPP20742 1482 aa29.36■■■□□ 2.29
TYMS-201ENST00000323224 EIF2AK4Q9P2K8 1649 aaKnown RBP29.35■■■□□ 2.29
TYMS-201ENST00000323224 NCKAP5LQ9HCH0 1330 aa29.35■■■□□ 2.29
TYMS-201ENST00000323224 TCOF1Q13428 1488 aaKnown RBP29.34■■■□□ 2.29
TYMS-201ENST00000323224 DNMT1P26358 1616 aaKnown RBP29.33■■■□□ 2.29
TYMS-201ENST00000323224 SHANK2Q9UPX8 1470 aa29.32■■■□□ 2.28
TYMS-201ENST00000323224 TNRQ92752 1358 aa29.32■■■□□ 2.28
TYMS-201ENST00000323224 ABCC3O15438 1527 aa29.32■■■□□ 2.28
TYMS-201ENST00000323224 DUOX2Q9NRD8 1548 aa29.32■■■□□ 2.28
TYMS-201ENST00000323224 DAPK1P53355 1430 aa29.32■■■□□ 2.28
TYMS-201ENST00000323224 A2ML1A8K2U0 1454 aa29.31■■■□□ 2.28
TYMS-201ENST00000323224 CEP152O94986 1710 aa29.3■■■□□ 2.28
TYMS-201ENST00000323224 PLA2R1Q13018 1463 aa29.29■■■□□ 2.28
TYMS-201ENST00000323224 KIF15Q9NS87 1388 aa29.28■■■□□ 2.28
TYMS-201ENST00000323224 RRP7BPQ9NSQ0 103 aa29.27■■■□□ 2.28
TYMS-201ENST00000323224 LTBP4Q8N2S1 1624 aa29.27■■■□□ 2.28
TYMS-201ENST00000323224 ZC3H13Q5T200 1668 aaKnown RBP29.27■■■□□ 2.28
TYMS-201ENST00000323224 CHIC2Q9UKJ5 165 aa29.23■■■□□ 2.27
TYMS-201ENST00000323224 CFAP65Q6ZU64 1925 aaKnown RBP29.23■■■□□ 2.27
TYMS-201ENST00000323224 ERBINQ96RT1 1412 aa29.2■■■□□ 2.26
TYMS-201ENST00000323224 PKD2Q13563 968 aa29.2■■■□□ 2.26
TYMS-201ENST00000323224 PRDM15P57071 1507 aaPredicted RBP29.19■■■□□ 2.26
TYMS-201ENST00000323224 SPATA31D1Q6ZQQ2 1576 aa29.18■■■□□ 2.26
TYMS-201ENST00000323224 ZNF335Q9H4Z2 1342 aaPredicted RBP29.18■■■□□ 2.26
TYMS-201ENST00000323224 POLR1AO95602 1720 aaPredicted RBP29.17■■■□□ 2.26
TYMS-201ENST00000323224 ERVK-7P63135 1459 aa29.16■■■□□ 2.26
TYMS-201ENST00000323224 DEPDC5O75140 1603 aa29.16■■■□□ 2.26
TYMS-201ENST00000323224 NEURL4Q96JN8 1562 aa29.16■■■□□ 2.26
TYMS-201ENST00000323224 NLRP1Q9C000 1473 aa29.15■■■□□ 2.26
TYMS-201ENST00000323224 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
TYMS-201ENST00000323224 UGGT1Q9NYU2 1555 aa29.13■■■□□ 2.25
TYMS-201ENST00000323224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.256e-7■□□□□ 11.3
TYMS-201ENST00000323224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.13■■■□□ 2.254e-9■■□□□ 12.2
TYMS-201ENST00000323224 ANKRD30AQ9BXX3 1397 aa29.12■■■□□ 2.25
TYMS-201ENST00000323224 ADGRL2O95490 1459 aa29.09■■■□□ 2.25
TYMS-201ENST00000323224 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
TYMS-201ENST00000323224 THEMISQ8N1K5 641 aaPredicted RBP29.05■■■□□ 2.24
TYMS-201ENST00000323224 ARHGAP31Q2M1Z3 1444 aa29.04■■■□□ 2.24
TYMS-201ENST00000323224 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
TYMS-201ENST00000323224 VWDEQ8N2E2 1590 aa29.03■■■□□ 2.24
TYMS-201ENST00000323224 ANKLE2Q86XL3 938 aa29.01■■■□□ 2.23
TYMS-201ENST00000323224 IQSEC2Q5JU85 1478 aa29■■■□□ 2.23
TYMS-201ENST00000323224 KANK1Q14678 1352 aa29■■■□□ 2.23
TYMS-201ENST00000323224 LMTK2Q8IWU2 1503 aa28.98■■■□□ 2.23
TYMS-201ENST00000323224 NPHP4O75161 1426 aaPredicted RBP28.97■■■□□ 2.23
TYMS-201ENST00000323224 MED14O60244 1454 aa28.97■■■□□ 2.23
TYMS-201ENST00000323224 IQGAP1P46940 1657 aa28.95■■■□□ 2.23
TYMS-201ENST00000323224 ANKRD50Q9ULJ7 1429 aa28.95■■■□□ 2.23
TYMS-201ENST00000323224 PIK3C2BO00750 1634 aa28.95■■■□□ 2.22
TYMS-201ENST00000323224 EFCAB6Q5THR3 1501 aa28.93■■■□□ 2.22
TYMS-201ENST00000323224 SYNMO15061 1565 aa28.92■■■□□ 2.22
TYMS-201ENST00000323224 ARHGAP23Q9P227 1491 aa28.88■■■□□ 2.21
TYMS-201ENST00000323224 STRCP1A6NGW2 1772 aa28.87■■■□□ 2.21
TYMS-201ENST00000323224 LTKP29376 864 aa28.87■■■□□ 2.21
TYMS-201ENST00000323224 SLIT1O75093 1534 aa28.87■■■□□ 2.21
TYMS-201ENST00000323224 UBAP1LF5GYI3 381 aa28.86■■■□□ 2.21
TYMS-201ENST00000323224 ITGAEP38570 1179 aa28.86■■■□□ 2.21
TYMS-201ENST00000323224 SCAF11Q99590 1463 aaKnown RBP28.85■■■□□ 2.21
TYMS-201ENST00000323224 NOS1P29475 1434 aa28.85■■■□□ 2.21
TYMS-201ENST00000323224 CPS1P31327 1500 aa28.85■■■□□ 2.21
TYMS-201ENST00000323224 IDI1Q13907 227 aa28.84■■■□□ 2.21
TYMS-201ENST00000323224 UNC13BO14795 1591 aa28.84■■■□□ 2.21
TYMS-201ENST00000323224 ROCK1Q13464 1354 aa28.82■■■□□ 2.2
TYMS-201ENST00000323224 TET3O43151 1660 aa28.82■■■□□ 2.2
TYMS-201ENST00000323224 TXNDC2Q86VQ3 553 aa28.81■■■□□ 2.2
TYMS-201ENST00000323224 TMEM2Q9UHN6 1383 aa28.79■■■□□ 2.2
TYMS-201ENST00000323224 KDM5AP29375 1690 aaKnown RBP28.78■■■□□ 2.2
TYMS-201ENST00000323224 STAG3Q9UJ98 1225 aa28.77■■■□□ 2.2
TYMS-201ENST00000323224 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
TYMS-201ENST00000323224 ADGRB3O60242 1522 aa28.75■■■□□ 2.19
TYMS-201ENST00000323224 RPRD2Q5VT52 1461 aaKnown RBP28.75■■■□□ 2.19
TYMS-201ENST00000323224 E9PCH4 1651 aa28.74■■■□□ 2.19
TYMS-201ENST00000323224 MYO5BQ9ULV0 1848 aa28.74■■■□□ 2.19
TYMS-201ENST00000323224 IQGAP3Q86VI3 1631 aa28.72■■■□□ 2.19
TYMS-201ENST00000323224 EID1Q9Y6B2 187 aa28.71■■■□□ 2.19
TYMS-201ENST00000323224 ALKQ9UM73 1620 aa28.71■■■□□ 2.19
TYMS-201ENST00000323224 LRRC7Q96NW7 1537 aa28.71■■■□□ 2.19
TYMS-201ENST00000323224 RRBP1Q9P2E9 1410 aaKnown RBP28.68■■■□□ 2.18
TYMS-201ENST00000323224 SLC52A1Q9NWF4 448 aa28.68■■■□□ 2.18
TYMS-201ENST00000323224 PIP4K2BP78356 416 aa28.67■■■□□ 2.18
TYMS-201ENST00000323224 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
TYMS-201ENST00000323224 NUP155O75694 1391 aa28.65■■■□□ 2.18
TYMS-201ENST00000323224 TMEM131LA2VDJ0 1609 aa28.65■■■□□ 2.18
TYMS-201ENST00000323224 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.17
TYMS-201ENST00000323224 XIRP1Q702N8 1843 aaKnown RBP28.63■■■□□ 2.17
TYMS-201ENST00000323224 TOM1O60784 492 aa28.62■■■□□ 2.17
TYMS-201ENST00000323224 SLC26A8Q96RN1 970 aa28.61■■■□□ 2.17
TYMS-201ENST00000323224 DISP3Q9P2K9 1392 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms