RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 DHX29Q7Z478 1369 aaKnown RBP28.99■■■□□ 2.23
SWI5-201ENST00000320188 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
SWI5-201ENST00000320188 TNRQ92752 1358 aa28.97■■■□□ 2.23
SWI5-201ENST00000320188 NEURL4Q96JN8 1562 aa28.96■■■□□ 2.23
SWI5-201ENST00000320188 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
SWI5-201ENST00000320188 PZPP20742 1482 aa28.96■■■□□ 2.23
SWI5-201ENST00000320188 CCDC141Q6ZP82 1450 aa28.95■■■□□ 2.22
SWI5-201ENST00000320188 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
SWI5-201ENST00000320188 KIF3BO15066 747 aa28.91■■■□□ 2.22
SWI5-201ENST00000320188 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
SWI5-201ENST00000320188 TOM1O60784 492 aa28.9■■■□□ 2.22
SWI5-201ENST00000320188 MED1Q15648 1581 aaPredicted RBP28.89■■■□□ 2.22
SWI5-201ENST00000320188 CAMSAP2Q08AD1 1489 aa28.89■■■□□ 2.22
SWI5-201ENST00000320188 PIP4K2BP78356 416 aa28.87■■■□□ 2.21
SWI5-201ENST00000320188 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
SWI5-201ENST00000320188 NLRP1Q9C000 1473 aa28.86■■■□□ 2.21
SWI5-201ENST00000320188 FBXO31Q5XUX0 539 aaPredicted RBP28.86■■■□□ 2.21
SWI5-201ENST00000320188 DEPDC5O75140 1603 aa28.85■■■□□ 2.21
SWI5-201ENST00000320188 RSPH4AQ5TD94 716 aa28.85■■■□□ 2.21
SWI5-201ENST00000320188 ANKLE2Q86XL3 938 aa28.85■■■□□ 2.21
SWI5-201ENST00000320188 UGGT1Q9NYU2 1555 aa28.84■■■□□ 2.21
SWI5-201ENST00000320188 HSPA1LP34931 641 aa28.84■■■□□ 2.21
SWI5-201ENST00000320188 NCOA2Q15596 1464 aa28.83■■■□□ 2.21
SWI5-201ENST00000320188 VWDEQ8N2E2 1590 aa28.83■■■□□ 2.21
SWI5-201ENST00000320188 THEMISQ8N1K5 641 aaPredicted RBP28.82■■■□□ 2.2
SWI5-201ENST00000320188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
SWI5-201ENST00000320188 IQGAP1P46940 1657 aa28.82■■■□□ 2.2
SWI5-201ENST00000320188 ARHGEF5Q12774 1597 aa28.81■■■□□ 2.2
SWI5-201ENST00000320188 MIA2Q96PC5 1412 aa28.81■■■□□ 2.2
SWI5-201ENST00000320188 ZC3H13Q5T200 1668 aaKnown RBP28.8■■■□□ 2.2
SWI5-201ENST00000320188 NPHP4O75161 1426 aaPredicted RBP28.79■■■□□ 2.2
SWI5-201ENST00000320188 MED14O60244 1454 aa28.78■■■□□ 2.2
SWI5-201ENST00000320188 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.2
SWI5-201ENST00000320188 TSPY4P0CV99 314 aa28.75■■■□□ 2.19
SWI5-201ENST00000320188 TSPY10P0CW01 314 aa28.75■■■□□ 2.19
SWI5-201ENST00000320188 SYNMO15061 1565 aa28.73■■■□□ 2.19
SWI5-201ENST00000320188 EIF2AK4Q9P2K8 1649 aaKnown RBP28.72■■■□□ 2.19
SWI5-201ENST00000320188 ABCC3O15438 1527 aa28.69■■■□□ 2.18
SWI5-201ENST00000320188 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
SWI5-201ENST00000320188 PHF23Q9BUL5 403 aaPredicted RBP28.69■■■□□ 2.18
SWI5-201ENST00000320188 MAST1Q9Y2H9 1570 aa28.69■■■□□ 2.18
SWI5-201ENST00000320188 STRCP1A6NGW2 1772 aa28.68■■■□□ 2.18
SWI5-201ENST00000320188 ALKQ9UM73 1620 aa28.67■■■□□ 2.18
SWI5-201ENST00000320188 CEP152O94986 1710 aa28.66■■■□□ 2.18
SWI5-201ENST00000320188 ERVK-7P63135 1459 aa28.65■■■□□ 2.18
SWI5-201ENST00000320188 UBR1Q8IWV7 1749 aa28.63■■■□□ 2.17
SWI5-201ENST00000320188 LRRC7Q96NW7 1537 aa28.62■■■□□ 2.17
SWI5-201ENST00000320188 MROH1Q8NDA8 1641 aa28.58■■■□□ 2.17
SWI5-201ENST00000320188 LRRC9Q6ZRR7 1453 aa28.57■■■□□ 2.16
SWI5-201ENST00000320188 SCAF11Q99590 1463 aaKnown RBP28.55■■■□□ 2.16
SWI5-201ENST00000320188 DUOX2Q9NRD8 1548 aa28.53■■■□□ 2.16
SWI5-201ENST00000320188 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
SWI5-201ENST00000320188 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
SWI5-201ENST00000320188 SLIT1O75093 1534 aa28.48■■■□□ 2.15
SWI5-201ENST00000320188 XIRP1Q702N8 1843 aaKnown RBP28.48■■■□□ 2.15
SWI5-201ENST00000320188 MYOM3Q5VTT5 1437 aa28.47■■■□□ 2.15
SWI5-201ENST00000320188 PRDM15P57071 1507 aaPredicted RBP28.47■■■□□ 2.15
SWI5-201ENST00000320188 ARHGAP23Q9P227 1491 aa28.46■■■□□ 2.15
SWI5-201ENST00000320188 CROCC2H7BZ55 1655 aa28.46■■■□□ 2.15
SWI5-201ENST00000320188 ARHGAP31Q2M1Z3 1444 aa28.43■■■□□ 2.14
SWI5-201ENST00000320188 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
SWI5-201ENST00000320188 TXNDC2Q86VQ3 553 aa28.42■■■□□ 2.14
SWI5-201ENST00000320188 EID1Q9Y6B2 187 aa28.42■■■□□ 2.14
SWI5-201ENST00000320188 ERBINQ96RT1 1412 aa28.42■■■□□ 2.14
SWI5-201ENST00000320188 PIK3C2BO00750 1634 aa28.41■■■□□ 2.14
SWI5-201ENST00000320188 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
SWI5-201ENST00000320188 KDM5AP29375 1690 aaKnown RBP28.39■■■□□ 2.14
SWI5-201ENST00000320188 LTKP29376 864 aa28.39■■■□□ 2.14
SWI5-201ENST00000320188 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
SWI5-201ENST00000320188 KANK1Q14678 1352 aa28.34■■■□□ 2.13
SWI5-201ENST00000320188 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.13
SWI5-201ENST00000320188 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
SWI5-201ENST00000320188 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
SWI5-201ENST00000320188 EFCAB6Q5THR3 1501 aa28.32■■■□□ 2.12
SWI5-201ENST00000320188 FAM135BQ49AJ0 1406 aa28.3■■■□□ 2.12
SWI5-201ENST00000320188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.29■■■□□ 2.12
SWI5-201ENST00000320188 RRP7BPQ9NSQ0 103 aa28.29■■■□□ 2.12
SWI5-201ENST00000320188 ABCC5O15440 1437 aa28.27■■■□□ 2.12
SWI5-201ENST00000320188 ROBO1Q9Y6N7 1651 aa28.27■■■□□ 2.12
SWI5-201ENST00000320188 LMTK2Q8IWU2 1503 aa28.25■■■□□ 2.11
SWI5-201ENST00000320188 DAPK1P53355 1430 aa28.25■■■□□ 2.11
SWI5-201ENST00000320188 TMEM94Q12767 1356 aa28.24■■■□□ 2.11
SWI5-201ENST00000320188 RGS17Q9UGC6 210 aaPredicted RBP28.24■■■□□ 2.11
SWI5-201ENST00000320188 KCNA6P17658 529 aa28.21■■■□□ 2.11
SWI5-201ENST00000320188 ADGRB3O60242 1522 aa28.21■■■□□ 2.11
SWI5-201ENST00000320188 NKTRP30414 1462 aaKnown RBP28.21■■■□□ 2.11
SWI5-201ENST00000320188 TET3O43151 1660 aa28.2■■■□□ 2.11
SWI5-201ENST00000320188 NWD1Q149M9 1564 aa28.2■■■□□ 2.1
SWI5-201ENST00000320188 ANKRD30AQ9BXX3 1397 aa28.19■■■□□ 2.1
SWI5-201ENST00000320188 PROSER2Q86WR7 435 aaPredicted RBP28.18■■■□□ 2.1
SWI5-201ENST00000320188 APLP2Q06481 763 aa28.17■■■□□ 2.1
SWI5-201ENST00000320188 IDI1Q13907 227 aa28.17■■■□□ 2.1
SWI5-201ENST00000320188 SLC26A8Q96RN1 970 aa28.15■■■□□ 2.1
SWI5-201ENST00000320188 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
SWI5-201ENST00000320188 PHLPP1O60346 1717 aa28.15■■■□□ 2.1
SWI5-201ENST00000320188 MSH6P52701 1360 aa28.13■■■□□ 2.09
SWI5-201ENST00000320188 NOS1P29475 1434 aa28.13■■■□□ 2.09
SWI5-201ENST00000320188 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
SWI5-201ENST00000320188 BCANQ96GW7 911 aa28.12■■■□□ 2.09
SWI5-201ENST00000320188 MYO5BQ9ULV0 1848 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms