RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ARHGEF5Q12774 1597 aa22.73■■□□□ 1.23
RPP40-201ENST00000319533 KIF3BO15066 747 aa22.71■■□□□ 1.23
RPP40-201ENST00000319533 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
RPP40-201ENST00000319533 KDM5DQ9BY66 1539 aa22.7■■□□□ 1.22
RPP40-201ENST00000319533 DNMT1P26358 1616 aaKnown RBP22.7■■□□□ 1.22
RPP40-201ENST00000319533 PZPP20742 1482 aa22.69■■□□□ 1.22
RPP40-201ENST00000319533 LRRC9Q6ZRR7 1453 aa22.68■■□□□ 1.22
RPP40-201ENST00000319533 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
RPP40-201ENST00000319533 TNRQ92752 1358 aa22.67■■□□□ 1.22
RPP40-201ENST00000319533 FBXO31Q5XUX0 539 aaPredicted RBP22.66■■□□□ 1.22
RPP40-201ENST00000319533 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
RPP40-201ENST00000319533 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
RPP40-201ENST00000319533 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
RPP40-201ENST00000319533 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
RPP40-201ENST00000319533 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
RPP40-201ENST00000319533 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
RPP40-201ENST00000319533 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
RPP40-201ENST00000319533 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
RPP40-201ENST00000319533 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
RPP40-201ENST00000319533 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
RPP40-201ENST00000319533 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
RPP40-201ENST00000319533 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
RPP40-201ENST00000319533 UBAP1LF5GYI3 381 aa22.57■■□□□ 1.2
RPP40-201ENST00000319533 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
RPP40-201ENST00000319533 ILDR2Q71H61 639 aa22.57■■□□□ 1.2
RPP40-201ENST00000319533 THEMISQ8N1K5 641 aaPredicted RBP22.55■■□□□ 1.2
RPP40-201ENST00000319533 EIF2AK4Q9P2K8 1649 aaKnown RBP22.55■■□□□ 1.2
RPP40-201ENST00000319533 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
RPP40-201ENST00000319533 SPATA31D1Q6ZQQ2 1576 aa22.55■■□□□ 1.2
RPP40-201ENST00000319533 ABCC3O15438 1527 aa22.54■■□□□ 1.2
RPP40-201ENST00000319533 ZC3H13Q5T200 1668 aaKnown RBP22.54■■□□□ 1.2
RPP40-201ENST00000319533 MED14O60244 1454 aa22.54■■□□□ 1.2
RPP40-201ENST00000319533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.21e-7■■■■■ 124.2
RPP40-201ENST00000319533 ANKLE2Q86XL3 938 aa22.53■■□□□ 1.2
RPP40-201ENST00000319533 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
RPP40-201ENST00000319533 CPS1P31327 1500 aa22.52■■□□□ 1.2
RPP40-201ENST00000319533 DEPDC5O75140 1603 aa22.52■■□□□ 1.2
RPP40-201ENST00000319533 SHANK2Q9UPX8 1470 aa22.52■■□□□ 1.2
RPP40-201ENST00000319533 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
RPP40-201ENST00000319533 VWDEQ8N2E2 1590 aa22.49■■□□□ 1.19
RPP40-201ENST00000319533 NPHP4O75161 1426 aaPredicted RBP22.48■■□□□ 1.19
RPP40-201ENST00000319533 ERVK-7P63135 1459 aa22.47■■□□□ 1.19
RPP40-201ENST00000319533 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
RPP40-201ENST00000319533 SOCS7O14512 581 aa22.47■■□□□ 1.19
RPP40-201ENST00000319533 ABCC5O15440 1437 aa22.42■■□□□ 1.18
RPP40-201ENST00000319533 ARHGAP31Q2M1Z3 1444 aa22.41■■□□□ 1.18
RPP40-201ENST00000319533 CEP152O94986 1710 aa22.41■■□□□ 1.18
RPP40-201ENST00000319533 TOM1O60784 492 aa22.41■■□□□ 1.18
RPP40-201ENST00000319533 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
RPP40-201ENST00000319533 PRDM15P57071 1507 aaPredicted RBP22.41■■□□□ 1.18
RPP40-201ENST00000319533 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
RPP40-201ENST00000319533 KIF15Q9NS87 1388 aa22.4■■□□□ 1.18
RPP40-201ENST00000319533 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.18
RPP40-201ENST00000319533 PTPN23Q9H3S7 1636 aa22.38■■□□□ 1.17
RPP40-201ENST00000319533 UBR1Q8IWV7 1749 aa22.37■■□□□ 1.17
RPP40-201ENST00000319533 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
RPP40-201ENST00000319533 DAPK1P53355 1430 aa22.35■■□□□ 1.17
RPP40-201ENST00000319533 HSPA1LP34931 641 aa22.35■■□□□ 1.17
RPP40-201ENST00000319533 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
RPP40-201ENST00000319533 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
RPP40-201ENST00000319533 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.17
RPP40-201ENST00000319533 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.17
RPP40-201ENST00000319533 SLIT1O75093 1534 aa22.33■■□□□ 1.17
RPP40-201ENST00000319533 PIP4K2BP78356 416 aa22.33■■□□□ 1.17
RPP40-201ENST00000319533 CFAP65Q6ZU64 1925 aaKnown RBP22.33■■□□□ 1.16
RPP40-201ENST00000319533 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
RPP40-201ENST00000319533 APLP2Q06481 763 aa22.32■■□□□ 1.16
RPP40-201ENST00000319533 SCAF11Q99590 1463 aaKnown RBP22.32■■□□□ 1.16
RPP40-201ENST00000319533 SYNMO15061 1565 aa22.3■■□□□ 1.16
RPP40-201ENST00000319533 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
RPP40-201ENST00000319533 LTKP29376 864 aa22.29■■□□□ 1.16
RPP40-201ENST00000319533 LMTK2Q8IWU2 1503 aa22.29■■□□□ 1.16
RPP40-201ENST00000319533 ANKRD30AQ9BXX3 1397 aa22.27■■□□□ 1.16
RPP40-201ENST00000319533 KANK1Q14678 1352 aa22.26■■□□□ 1.15
RPP40-201ENST00000319533 TXNDC2Q86VQ3 553 aa22.26■■□□□ 1.15
RPP40-201ENST00000319533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
RPP40-201ENST00000319533 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
RPP40-201ENST00000319533 PIK3C2BO00750 1634 aa22.24■■□□□ 1.15
RPP40-201ENST00000319533 TMEM2Q9UHN6 1383 aa22.24■■□□□ 1.15
RPP40-201ENST00000319533 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
RPP40-201ENST00000319533 EID1Q9Y6B2 187 aa22.22■■□□□ 1.15
RPP40-201ENST00000319533 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
RPP40-201ENST00000319533 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
RPP40-201ENST00000319533 NOS1P29475 1434 aa22.2■■□□□ 1.14
RPP40-201ENST00000319533 IDI1Q13907 227 aa22.19■■□□□ 1.14
RPP40-201ENST00000319533 EFCAB6Q5THR3 1501 aa22.18■■□□□ 1.14
RPP40-201ENST00000319533 XIRP1Q702N8 1843 aaKnown RBP22.15■■□□□ 1.14
RPP40-201ENST00000319533 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
RPP40-201ENST00000319533 TET3O43151 1660 aa22.14■■□□□ 1.14
RPP40-201ENST00000319533 ADGRB3O60242 1522 aa22.12■■□□□ 1.13
RPP40-201ENST00000319533 RPRD2Q5VT52 1461 aaKnown RBP22.12■■□□□ 1.13
RPP40-201ENST00000319533 SLC52A1Q9NWF4 448 aa22.12■■□□□ 1.13
RPP40-201ENST00000319533 ANKRD50Q9ULJ7 1429 aa22.11■■□□□ 1.13
RPP40-201ENST00000319533 KCNA6P17658 529 aa22.1■■□□□ 1.13
RPP40-201ENST00000319533 ADRA2BP18089 450 aa22.1■■□□□ 1.13
RPP40-201ENST00000319533 FAM135BQ49AJ0 1406 aa22.07■■□□□ 1.12
RPP40-201ENST00000319533 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
RPP40-201ENST00000319533 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
RPP40-201ENST00000319533 SLC26A8Q96RN1 970 aa22.05■■□□□ 1.12
RPP40-201ENST00000319533 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms