RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 ZCCHC11Q5TAX3 1644 aaKnown RBP13.93□□□□□ -0.18
LCLAT1-202ENST00000319406 USP47Q96K76 1375 aa13.93□□□□□ -0.18
LCLAT1-202ENST00000319406 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
LCLAT1-202ENST00000319406 MAGI2Q86UL8 1455 aa13.91□□□□□ -0.18
LCLAT1-202ENST00000319406 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 DHX29Q7Z478 1369 aaKnown RBP13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 PLCH2O75038 1416 aa13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 NBR1Q14596 966 aa13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
LCLAT1-202ENST00000319406 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
LCLAT1-202ENST00000319406 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
LCLAT1-202ENST00000319406 ABCC1P33527 1531 aa13.88□□□□□ -0.19
LCLAT1-202ENST00000319406 DUOX2Q9NRD8 1548 aa13.87□□□□□ -0.19
LCLAT1-202ENST00000319406 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
LCLAT1-202ENST00000319406 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
LCLAT1-202ENST00000319406 ATP10AO60312 1499 aa13.86□□□□□ -0.19
LCLAT1-202ENST00000319406 ARAP3Q8WWN8 1544 aa13.86□□□□□ -0.19
LCLAT1-202ENST00000319406 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
LCLAT1-202ENST00000319406 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
LCLAT1-202ENST00000319406 PRAG1Q86YV5 1406 aa13.84□□□□□ -0.19
LCLAT1-202ENST00000319406 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.19
LCLAT1-202ENST00000319406 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
LCLAT1-202ENST00000319406 CCDC144AA2RUR9 1427 aa13.82□□□□□ -0.2
LCLAT1-202ENST00000319406 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
LCLAT1-202ENST00000319406 A2MP01023 1474 aa13.82□□□□□ -0.2
LCLAT1-202ENST00000319406 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
LCLAT1-202ENST00000319406 E9PCH4 1651 aa13.81□□□□□ -0.2
LCLAT1-202ENST00000319406 ROCK2O75116 1388 aaKnown RBP13.81□□□□□ -0.2
LCLAT1-202ENST00000319406 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
LCLAT1-202ENST00000319406 LAMC1P11047 1609 aa13.81□□□□□ -0.2
LCLAT1-202ENST00000319406 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
LCLAT1-202ENST00000319406 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
LCLAT1-202ENST00000319406 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
LCLAT1-202ENST00000319406 ZFYVE16Q7Z3T8 1539 aa13.79□□□□□ -0.2
LCLAT1-202ENST00000319406 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
LCLAT1-202ENST00000319406 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
LCLAT1-202ENST00000319406 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
LCLAT1-202ENST00000319406 RTEL1-TNFRSF6BF6WH68 1400 aa13.78□□□□□ -0.2
LCLAT1-202ENST00000319406 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.2
LCLAT1-202ENST00000319406 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.2
LCLAT1-202ENST00000319406 PRDM15P57071 1507 aaPredicted RBP13.77□□□□□ -0.21
LCLAT1-202ENST00000319406 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
LCLAT1-202ENST00000319406 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
LCLAT1-202ENST00000319406 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
LCLAT1-202ENST00000319406 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
LCLAT1-202ENST00000319406 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
LCLAT1-202ENST00000319406 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
LCLAT1-202ENST00000319406 EIF2AK4Q9P2K8 1649 aaKnown RBP13.74□□□□□ -0.21
LCLAT1-202ENST00000319406 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
LCLAT1-202ENST00000319406 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
LCLAT1-202ENST00000319406 VWDEQ8N2E2 1590 aa13.73□□□□□ -0.21
LCLAT1-202ENST00000319406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■□□□□ 10.6
LCLAT1-202ENST00000319406 COL17A1Q9UMD9 1497 aaPredicted RBP13.71□□□□□ -0.21
LCLAT1-202ENST00000319406 TRPM2O94759 1503 aa13.71□□□□□ -0.21
LCLAT1-202ENST00000319406 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
LCLAT1-202ENST00000319406 PTPRTO14522 1441 aa13.71□□□□□ -0.21
LCLAT1-202ENST00000319406 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
LCLAT1-202ENST00000319406 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
LCLAT1-202ENST00000319406 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
LCLAT1-202ENST00000319406 ATP7AQ04656 1500 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 FANCAO15360 1455 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 MADDQ8WXG6 1647 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 TESK2Q96S53 571 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 TET3O43151 1660 aa13.69□□□□□ -0.22
LCLAT1-202ENST00000319406 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 SPHKAPQ2M3C7 1700 aa13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 CEP152O94986 1710 aa13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
LCLAT1-202ENST00000319406 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
LCLAT1-202ENST00000319406 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
LCLAT1-202ENST00000319406 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
LCLAT1-202ENST00000319406 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
LCLAT1-202ENST00000319406 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
LCLAT1-202ENST00000319406 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 DISP3Q9P2K9 1392 aa13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 IQGAP1P46940 1657 aa13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 ADGRL1O94910 1474 aa13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
LCLAT1-202ENST00000319406 RALBP1Q15311 655 aa13.64□□□□□ -0.23
LCLAT1-202ENST00000319406 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
LCLAT1-202ENST00000319406 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
LCLAT1-202ENST00000319406 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
LCLAT1-202ENST00000319406 KIDINS220Q9ULH0 1771 aa13.62□□□□□ -0.23
LCLAT1-202ENST00000319406 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
LCLAT1-202ENST00000319406 UBE2Q2Q8WVN8 375 aa13.6□□□□□ -0.23
LCLAT1-202ENST00000319406 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
LCLAT1-202ENST00000319406 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
LCLAT1-202ENST00000319406 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
LCLAT1-202ENST00000319406 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
LCLAT1-202ENST00000319406 EFCAB6Q5THR3 1501 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms