RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
FOXR1-201ENST00000317011 PKD2Q13563 968 aa24.41■■□□□ 1.5
FOXR1-201ENST00000317011 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.5
FOXR1-201ENST00000317011 NCKAP5LQ9HCH0 1330 aa24.39■■□□□ 1.5
FOXR1-201ENST00000317011 PLA2R1Q13018 1463 aa24.38■■□□□ 1.49
FOXR1-201ENST00000317011 PZPP20742 1482 aa24.38■■□□□ 1.49
FOXR1-201ENST00000317011 ABCC5O15440 1437 aa24.36■■□□□ 1.49
FOXR1-201ENST00000317011 KDM5DQ9BY66 1539 aa24.36■■□□□ 1.49
FOXR1-201ENST00000317011 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
FOXR1-201ENST00000317011 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
FOXR1-201ENST00000317011 CEP170BQ9Y4F5 1589 aaPredicted RBP24.34■■□□□ 1.49
FOXR1-201ENST00000317011 TNRQ92752 1358 aa24.34■■□□□ 1.49
FOXR1-201ENST00000317011 ZNF142P52746 1687 aaPredicted RBP24.34■■□□□ 1.49
FOXR1-201ENST00000317011 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
FOXR1-201ENST00000317011 MYO3AQ8NEV4 1616 aa24.33■■□□□ 1.49
FOXR1-201ENST00000317011 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
FOXR1-201ENST00000317011 RNF17Q9BXT8 1623 aaKnown RBP24.29■■□□□ 1.48
FOXR1-201ENST00000317011 SHANK2Q9UPX8 1470 aa24.29■■□□□ 1.48
FOXR1-201ENST00000317011 DUOX2Q9NRD8 1548 aa24.29■■□□□ 1.48
FOXR1-201ENST00000317011 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
FOXR1-201ENST00000317011 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
FOXR1-201ENST00000317011 PTPN23Q9H3S7 1636 aa24.27■■□□□ 1.48
FOXR1-201ENST00000317011 KIF15Q9NS87 1388 aa24.27■■□□□ 1.48
FOXR1-201ENST00000317011 DAPK1P53355 1430 aa24.27■■□□□ 1.48
FOXR1-201ENST00000317011 ABCC3O15438 1527 aa24.26■■□□□ 1.47
FOXR1-201ENST00000317011 EIF2AK4Q9P2K8 1649 aaKnown RBP24.26■■□□□ 1.47
FOXR1-201ENST00000317011 THEMISQ8N1K5 641 aaPredicted RBP24.26■■□□□ 1.47
FOXR1-201ENST00000317011 NLRP1Q9C000 1473 aa24.25■■□□□ 1.47
FOXR1-201ENST00000317011 MROH1Q8NDA8 1641 aa24.24■■□□□ 1.47
FOXR1-201ENST00000317011 ZNF335Q9H4Z2 1342 aaPredicted RBP24.23■■□□□ 1.47
FOXR1-201ENST00000317011 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
FOXR1-201ENST00000317011 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
FOXR1-201ENST00000317011 ANKLE2Q86XL3 938 aa24.21■■□□□ 1.47
FOXR1-201ENST00000317011 SPATA31D1Q6ZQQ2 1576 aa24.2■■□□□ 1.46
FOXR1-201ENST00000317011 ARHGAP31Q2M1Z3 1444 aa24.19■■□□□ 1.46
FOXR1-201ENST00000317011 ANKRD30AQ9BXX3 1397 aa24.18■■□□□ 1.46
FOXR1-201ENST00000317011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
FOXR1-201ENST00000317011 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
FOXR1-201ENST00000317011 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
FOXR1-201ENST00000317011 ZC3H13Q5T200 1668 aaKnown RBP24.17■■□□□ 1.46
FOXR1-201ENST00000317011 UGGT1Q9NYU2 1555 aa24.15■■□□□ 1.46
FOXR1-201ENST00000317011 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
FOXR1-201ENST00000317011 MED14O60244 1454 aa24.13■■□□□ 1.45
FOXR1-201ENST00000317011 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
FOXR1-201ENST00000317011 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
FOXR1-201ENST00000317011 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
FOXR1-201ENST00000317011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.11■■□□□ 1.45
FOXR1-201ENST00000317011 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
FOXR1-201ENST00000317011 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
FOXR1-201ENST00000317011 KANK1Q14678 1352 aa24.07■■□□□ 1.44
FOXR1-201ENST00000317011 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
FOXR1-201ENST00000317011 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
FOXR1-201ENST00000317011 NPHP4O75161 1426 aaPredicted RBP24.06■■□□□ 1.44
FOXR1-201ENST00000317011 CEP152O94986 1710 aa24.05■■□□□ 1.44
FOXR1-201ENST00000317011 LTKP29376 864 aa24.02■■□□□ 1.44
FOXR1-201ENST00000317011 IDI1Q13907 227 aa24.02■■□□□ 1.44
FOXR1-201ENST00000317011 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
FOXR1-201ENST00000317011 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
FOXR1-201ENST00000317011 UBAP1LF5GYI3 381 aa24.01■■□□□ 1.43
FOXR1-201ENST00000317011 ANKRD50Q9ULJ7 1429 aa24.01■■□□□ 1.43
FOXR1-201ENST00000317011 CFAP65Q6ZU64 1925 aaKnown RBP24■■□□□ 1.43
FOXR1-201ENST00000317011 CPS1P31327 1500 aa24■■□□□ 1.43
FOXR1-201ENST00000317011 NOS1P29475 1434 aa23.99■■□□□ 1.43
FOXR1-201ENST00000317011 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
FOXR1-201ENST00000317011 SLIT1O75093 1534 aa23.98■■□□□ 1.43
FOXR1-201ENST00000317011 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
FOXR1-201ENST00000317011 ROCK1Q13464 1354 aa23.96■■□□□ 1.43
FOXR1-201ENST00000317011 SLC52A1Q9NWF4 448 aa23.95■■□□□ 1.42
FOXR1-201ENST00000317011 TMEM2Q9UHN6 1383 aa23.94■■□□□ 1.42
FOXR1-201ENST00000317011 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
FOXR1-201ENST00000317011 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
FOXR1-201ENST00000317011 TOM1O60784 492 aa23.91■■□□□ 1.42
FOXR1-201ENST00000317011 IQGAP1P46940 1657 aa23.91■■□□□ 1.42
FOXR1-201ENST00000317011 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
FOXR1-201ENST00000317011 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.42
FOXR1-201ENST00000317011 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
FOXR1-201ENST00000317011 STAG3Q9UJ98 1225 aa23.88■■□□□ 1.41
FOXR1-201ENST00000317011 SYNMO15061 1565 aa23.87■■□□□ 1.41
FOXR1-201ENST00000317011 PIK3C2BO00750 1634 aa23.87■■□□□ 1.41
FOXR1-201ENST00000317011 KDM5AP29375 1690 aaKnown RBP23.86■■□□□ 1.41
FOXR1-201ENST00000317011 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
FOXR1-201ENST00000317011 STRCP1A6NGW2 1772 aa23.81■■□□□ 1.4
FOXR1-201ENST00000317011 ALKQ9UM73 1620 aa23.8■■□□□ 1.4
FOXR1-201ENST00000317011 TET3O43151 1660 aa23.79■■□□□ 1.4
FOXR1-201ENST00000317011 DISP3Q9P2K9 1392 aa23.79■■□□□ 1.4
FOXR1-201ENST00000317011 UNC13BO14795 1591 aa23.79■■□□□ 1.4
FOXR1-201ENST00000317011 HSPA1LP34931 641 aa23.79■■□□□ 1.4
FOXR1-201ENST00000317011 PIP4K2BP78356 416 aa23.79■■□□□ 1.4
FOXR1-201ENST00000317011 ITGAEP38570 1179 aa23.78■■□□□ 1.4
FOXR1-201ENST00000317011 KCNA6P17658 529 aa23.77■■□□□ 1.4
FOXR1-201ENST00000317011 NUP155O75694 1391 aa23.77■■□□□ 1.4
FOXR1-201ENST00000317011 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
FOXR1-201ENST00000317011 ADGRB3O60242 1522 aa23.75■■□□□ 1.39
FOXR1-201ENST00000317011 ILDR2Q71H61 639 aa23.75■■□□□ 1.39
FOXR1-201ENST00000317011 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
FOXR1-201ENST00000317011 HDGFP51858 240 aaKnown RBP23.74■■□□□ 1.39
FOXR1-201ENST00000317011 SLC26A8Q96RN1 970 aa23.74■■□□□ 1.39
FOXR1-201ENST00000317011 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
FOXR1-201ENST00000317011 GCC2Q8IWJ2 1684 aa23.7■■□□□ 1.38
FOXR1-201ENST00000317011 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms