RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
TTC9C-202ENST00000316461 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
TTC9C-202ENST00000316461 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
TTC9C-202ENST00000316461 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
TTC9C-202ENST00000316461 SHANK2Q9UPX8 1470 aa12.15□□□□□ -0.46
TTC9C-202ENST00000316461 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
TTC9C-202ENST00000316461 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
TTC9C-202ENST00000316461 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
TTC9C-202ENST00000316461 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
TTC9C-202ENST00000316461 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
TTC9C-202ENST00000316461 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
TTC9C-202ENST00000316461 CPS1P31327 1500 aa12.11□□□□□ -0.47
TTC9C-202ENST00000316461 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
TTC9C-202ENST00000316461 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
TTC9C-202ENST00000316461 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
TTC9C-202ENST00000316461 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
TTC9C-202ENST00000316461 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
TTC9C-202ENST00000316461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.09□□□□□ -0.47
TTC9C-202ENST00000316461 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
TTC9C-202ENST00000316461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.487e-8■■□□□ 14
TTC9C-202ENST00000316461 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
TTC9C-202ENST00000316461 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.48
TTC9C-202ENST00000316461 TNRQ92752 1358 aa12.07□□□□□ -0.48
TTC9C-202ENST00000316461 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
TTC9C-202ENST00000316461 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
TTC9C-202ENST00000316461 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
TTC9C-202ENST00000316461 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
TTC9C-202ENST00000316461 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
TTC9C-202ENST00000316461 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
TTC9C-202ENST00000316461 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
TTC9C-202ENST00000316461 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
TTC9C-202ENST00000316461 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
TTC9C-202ENST00000316461 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
TTC9C-202ENST00000316461 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
TTC9C-202ENST00000316461 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
TTC9C-202ENST00000316461 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
TTC9C-202ENST00000316461 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
TTC9C-202ENST00000316461 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
TTC9C-202ENST00000316461 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
TTC9C-202ENST00000316461 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
TTC9C-202ENST00000316461 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
TTC9C-202ENST00000316461 BCANQ96GW7 911 aa12.01□□□□□ -0.49
TTC9C-202ENST00000316461 MIA2Q96PC5 1412 aa12□□□□□ -0.49
TTC9C-202ENST00000316461 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
TTC9C-202ENST00000316461 KDM5DQ9BY66 1539 aa11.99□□□□□ -0.49
TTC9C-202ENST00000316461 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
TTC9C-202ENST00000316461 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
TTC9C-202ENST00000316461 MED14O60244 1454 aa11.97□□□□□ -0.49
TTC9C-202ENST00000316461 PZPP20742 1482 aa11.97□□□□□ -0.49
TTC9C-202ENST00000316461 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
TTC9C-202ENST00000316461 MYOM3Q5VTT5 1437 aa11.96□□□□□ -0.49
TTC9C-202ENST00000316461 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
TTC9C-202ENST00000316461 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
TTC9C-202ENST00000316461 UGGT1Q9NYU2 1555 aa11.96□□□□□ -0.5
TTC9C-202ENST00000316461 KANK1Q14678 1352 aa11.95□□□□□ -0.5
TTC9C-202ENST00000316461 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
TTC9C-202ENST00000316461 KIF15Q9NS87 1388 aa11.94□□□□□ -0.5
TTC9C-202ENST00000316461 DEPDC5O75140 1603 aa11.94□□□□□ -0.5
TTC9C-202ENST00000316461 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
TTC9C-202ENST00000316461 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
TTC9C-202ENST00000316461 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
TTC9C-202ENST00000316461 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
TTC9C-202ENST00000316461 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
TTC9C-202ENST00000316461 LTKP29376 864 aa11.91□□□□□ -0.5
TTC9C-202ENST00000316461 ITGAEP38570 1179 aa11.91□□□□□ -0.5
TTC9C-202ENST00000316461 TRIM52Q96A61 297 aa11.91□□□□□ -0.5
TTC9C-202ENST00000316461 SYNMO15061 1565 aa11.91□□□□□ -0.5
TTC9C-202ENST00000316461 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
TTC9C-202ENST00000316461 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
TTC9C-202ENST00000316461 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
TTC9C-202ENST00000316461 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
TTC9C-202ENST00000316461 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
TTC9C-202ENST00000316461 ABCC5O15440 1437 aa11.88□□□□□ -0.51
TTC9C-202ENST00000316461 ABCC3O15438 1527 aa11.88□□□□□ -0.51
TTC9C-202ENST00000316461 PPP1R15AO75807 674 aaPredicted RBP11.88□□□□□ -0.51
TTC9C-202ENST00000316461 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
TTC9C-202ENST00000316461 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
TTC9C-202ENST00000316461 DAPK1P53355 1430 aa11.86□□□□□ -0.51
TTC9C-202ENST00000316461 IDI1Q13907 227 aa11.86□□□□□ -0.51
TTC9C-202ENST00000316461 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
TTC9C-202ENST00000316461 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
TTC9C-202ENST00000316461 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
TTC9C-202ENST00000316461 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
TTC9C-202ENST00000316461 MAST1Q9Y2H9 1570 aa11.85□□□□□ -0.51
TTC9C-202ENST00000316461 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
TTC9C-202ENST00000316461 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
TTC9C-202ENST00000316461 SCAF11Q99590 1463 aaKnown RBP11.84□□□□□ -0.51
TTC9C-202ENST00000316461 C14orf37Q86TY3 774 aa11.84□□□□□ -0.51
TTC9C-202ENST00000316461 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
TTC9C-202ENST00000316461 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
TTC9C-202ENST00000316461 LRP6O75581 1613 aa11.82□□□□□ -0.52
TTC9C-202ENST00000316461 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
TTC9C-202ENST00000316461 CEP152O94986 1710 aa11.82□□□□□ -0.52
TTC9C-202ENST00000316461 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
TTC9C-202ENST00000316461 UBR1Q8IWV7 1749 aa11.81□□□□□ -0.52
TTC9C-202ENST00000316461 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
TTC9C-202ENST00000316461 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
TTC9C-202ENST00000316461 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
TTC9C-202ENST00000316461 ARHGAP23Q9P227 1491 aa11.79□□□□□ -0.52
TTC9C-202ENST00000316461 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms