RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
CCDC89-201ENST00000316398 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
CCDC89-201ENST00000316398 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
CCDC89-201ENST00000316398 EHBP1L1Q8N3D4 1523 aa18.34■□□□□ 0.53
CCDC89-201ENST00000316398 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
CCDC89-201ENST00000316398 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
CCDC89-201ENST00000316398 TNRQ92752 1358 aa18.33■□□□□ 0.52
CCDC89-201ENST00000316398 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
CCDC89-201ENST00000316398 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
CCDC89-201ENST00000316398 TOM1O60784 492 aa18.31■□□□□ 0.52
CCDC89-201ENST00000316398 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
CCDC89-201ENST00000316398 PZPP20742 1482 aa18.3■□□□□ 0.52
CCDC89-201ENST00000316398 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
CCDC89-201ENST00000316398 SPATA31D1Q6ZQQ2 1576 aa18.29■□□□□ 0.52
CCDC89-201ENST00000316398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCDC89-201ENST00000316398 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
CCDC89-201ENST00000316398 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
CCDC89-201ENST00000316398 KDM5DQ9BY66 1539 aa18.26■□□□□ 0.51
CCDC89-201ENST00000316398 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
CCDC89-201ENST00000316398 CPS1P31327 1500 aa18.25■□□□□ 0.51
CCDC89-201ENST00000316398 MED14O60244 1454 aa18.24■□□□□ 0.51
CCDC89-201ENST00000316398 HSPA1LP34931 641 aa18.23■□□□□ 0.51
CCDC89-201ENST00000316398 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
CCDC89-201ENST00000316398 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
CCDC89-201ENST00000316398 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
CCDC89-201ENST00000316398 UGGT1Q9NYU2 1555 aa18.19■□□□□ 0.5
CCDC89-201ENST00000316398 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
CCDC89-201ENST00000316398 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
CCDC89-201ENST00000316398 DEPDC5O75140 1603 aa18.18■□□□□ 0.5
CCDC89-201ENST00000316398 POLR1AO95602 1720 aaPredicted RBP18.17■□□□□ 0.5
CCDC89-201ENST00000316398 KANK4Q5T7N3 995 aaPredicted RBP18.17■□□□□ 0.5
CCDC89-201ENST00000316398 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
CCDC89-201ENST00000316398 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
CCDC89-201ENST00000316398 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
CCDC89-201ENST00000316398 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
CCDC89-201ENST00000316398 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
CCDC89-201ENST00000316398 MAST1Q9Y2H9 1570 aa18.14■□□□□ 0.49
CCDC89-201ENST00000316398 ABCC3O15438 1527 aa18.13■□□□□ 0.49
CCDC89-201ENST00000316398 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
CCDC89-201ENST00000316398 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
CCDC89-201ENST00000316398 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
CCDC89-201ENST00000316398 LTKP29376 864 aa18.09■□□□□ 0.49
CCDC89-201ENST00000316398 TXNDC2Q86VQ3 553 aa18.09■□□□□ 0.49
CCDC89-201ENST00000316398 ERVK-7P63135 1459 aa18.09■□□□□ 0.49
CCDC89-201ENST00000316398 EIF2AK4Q9P2K8 1649 aaKnown RBP18.08■□□□□ 0.49
CCDC89-201ENST00000316398 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
CCDC89-201ENST00000316398 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
CCDC89-201ENST00000316398 ZC3H13Q5T200 1668 aaKnown RBP18.08■□□□□ 0.48
CCDC89-201ENST00000316398 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
CCDC89-201ENST00000316398 IQGAP1P46940 1657 aa18.06■□□□□ 0.48
CCDC89-201ENST00000316398 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
CCDC89-201ENST00000316398 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
CCDC89-201ENST00000316398 MROH1Q8NDA8 1641 aa18.05■□□□□ 0.48
CCDC89-201ENST00000316398 ARHGAP23Q9P227 1491 aa18.04■□□□□ 0.48
CCDC89-201ENST00000316398 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
CCDC89-201ENST00000316398 ABCC5O15440 1437 aa18.03■□□□□ 0.48
CCDC89-201ENST00000316398 SCAF11Q99590 1463 aaKnown RBP18.03■□□□□ 0.48
CCDC89-201ENST00000316398 CFAP65Q6ZU64 1925 aaKnown RBP18.02■□□□□ 0.48
CCDC89-201ENST00000316398 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
CCDC89-201ENST00000316398 SLIT1O75093 1534 aa18.02■□□□□ 0.48
CCDC89-201ENST00000316398 KIF15Q9NS87 1388 aa18.02■□□□□ 0.48
CCDC89-201ENST00000316398 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
CCDC89-201ENST00000316398 ERBINQ96RT1 1412 aa18■□□□□ 0.47
CCDC89-201ENST00000316398 IDI1Q13907 227 aa18■□□□□ 0.47
CCDC89-201ENST00000316398 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
CCDC89-201ENST00000316398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
CCDC89-201ENST00000316398 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
CCDC89-201ENST00000316398 APLP2Q06481 763 aa17.98■□□□□ 0.47
CCDC89-201ENST00000316398 KANK1Q14678 1352 aa17.97■□□□□ 0.47
CCDC89-201ENST00000316398 KCNA6P17658 529 aa17.97■□□□□ 0.47
CCDC89-201ENST00000316398 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
CCDC89-201ENST00000316398 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.47
CCDC89-201ENST00000316398 SYNMO15061 1565 aa17.96■□□□□ 0.46
CCDC89-201ENST00000316398 CEP152O94986 1710 aa17.96■□□□□ 0.46
CCDC89-201ENST00000316398 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
CCDC89-201ENST00000316398 SLC52A1Q9NWF4 448 aa17.95■□□□□ 0.46
CCDC89-201ENST00000316398 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
CCDC89-201ENST00000316398 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
CCDC89-201ENST00000316398 DAPK1P53355 1430 aa17.93■□□□□ 0.46
CCDC89-201ENST00000316398 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
CCDC89-201ENST00000316398 LMTK2Q8IWU2 1503 aa17.92■□□□□ 0.46
CCDC89-201ENST00000316398 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
CCDC89-201ENST00000316398 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
CCDC89-201ENST00000316398 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
CCDC89-201ENST00000316398 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
CCDC89-201ENST00000316398 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.46
CCDC89-201ENST00000316398 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.46
CCDC89-201ENST00000316398 NOS1P29475 1434 aa17.89■□□□□ 0.45
CCDC89-201ENST00000316398 TET3O43151 1660 aa17.89■□□□□ 0.45
CCDC89-201ENST00000316398 TMEM94Q12767 1356 aa17.89■□□□□ 0.45
CCDC89-201ENST00000316398 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
CCDC89-201ENST00000316398 XIRP1Q702N8 1843 aaKnown RBP17.87■□□□□ 0.45
CCDC89-201ENST00000316398 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
CCDC89-201ENST00000316398 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
CCDC89-201ENST00000316398 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
CCDC89-201ENST00000316398 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
CCDC89-201ENST00000316398 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
CCDC89-201ENST00000316398 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
CCDC89-201ENST00000316398 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
CCDC89-201ENST00000316398 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms