RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
TPM3-203ENST00000312970 DHX29Q7Z478 1369 aaKnown RBP12.89□□□□□ -0.35
TPM3-203ENST00000312970 TSPY4P0CV99 314 aa12.88□□□□□ -0.35
TPM3-203ENST00000312970 TSPY10P0CW01 314 aa12.88□□□□□ -0.35
TPM3-203ENST00000312970 VPS8Q8N3P4 1428 aa12.88□□□□□ -0.35
TPM3-203ENST00000312970 CEP170BQ9Y4F5 1589 aaPredicted RBP12.87□□□□□ -0.35
TPM3-203ENST00000312970 KIF3BO15066 747 aa12.87□□□□□ -0.35
TPM3-203ENST00000312970 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
TPM3-203ENST00000312970 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
TPM3-203ENST00000312970 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
TPM3-203ENST00000312970 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
TPM3-203ENST00000312970 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
TPM3-203ENST00000312970 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
TPM3-203ENST00000312970 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
TPM3-203ENST00000312970 HSPA1LP34931 641 aa12.83□□□□□ -0.36
TPM3-203ENST00000312970 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
TPM3-203ENST00000312970 MAP3K1Q13233 1512 aa12.83□□□□□ -0.36
TPM3-203ENST00000312970 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
TPM3-203ENST00000312970 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
TPM3-203ENST00000312970 APLP2Q06481 763 aa12.81□□□□□ -0.36
TPM3-203ENST00000312970 PKD2Q13563 968 aa12.81□□□□□ -0.36
TPM3-203ENST00000312970 POLR1AO95602 1720 aaPredicted RBP12.81□□□□□ -0.36
TPM3-203ENST00000312970 ARHGEF5Q12774 1597 aa12.81□□□□□ -0.36
TPM3-203ENST00000312970 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
TPM3-203ENST00000312970 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
TPM3-203ENST00000312970 A2ML1A8K2U0 1454 aa12.79□□□□□ -0.36
TPM3-203ENST00000312970 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
TPM3-203ENST00000312970 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
TPM3-203ENST00000312970 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
TPM3-203ENST00000312970 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
TPM3-203ENST00000312970 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
TPM3-203ENST00000312970 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
TPM3-203ENST00000312970 MYOM3Q5VTT5 1437 aa12.77□□□□□ -0.37
TPM3-203ENST00000312970 TNRQ92752 1358 aa12.76□□□□□ -0.37
TPM3-203ENST00000312970 PZPP20742 1482 aa12.76□□□□□ -0.37
TPM3-203ENST00000312970 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
TPM3-203ENST00000312970 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
TPM3-203ENST00000312970 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
TPM3-203ENST00000312970 TOM1O60784 492 aa12.73□□□□□ -0.37
TPM3-203ENST00000312970 ANKLE2Q86XL3 938 aa12.72□□□□□ -0.37
TPM3-203ENST00000312970 ZC3H13Q5T200 1668 aaKnown RBP12.71□□□□□ -0.37
TPM3-203ENST00000312970 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
TPM3-203ENST00000312970 CPS1P31327 1500 aa12.71□□□□□ -0.38
TPM3-203ENST00000312970 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
TPM3-203ENST00000312970 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
TPM3-203ENST00000312970 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
TPM3-203ENST00000312970 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
TPM3-203ENST00000312970 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
TPM3-203ENST00000312970 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
TPM3-203ENST00000312970 EIF2AK4Q9P2K8 1649 aaKnown RBP12.69□□□□□ -0.38
TPM3-203ENST00000312970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.381e-7■■□□□ 12.2
TPM3-203ENST00000312970 DUOX2Q9NRD8 1548 aa12.68□□□□□ -0.38
TPM3-203ENST00000312970 ABCC5O15440 1437 aa12.68□□□□□ -0.38
TPM3-203ENST00000312970 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
TPM3-203ENST00000312970 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
TPM3-203ENST00000312970 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
TPM3-203ENST00000312970 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
TPM3-203ENST00000312970 ABCC3O15438 1527 aa12.67□□□□□ -0.38
TPM3-203ENST00000312970 PTPN23Q9H3S7 1636 aa12.66□□□□□ -0.38
TPM3-203ENST00000312970 CEP152O94986 1710 aa12.66□□□□□ -0.38
TPM3-203ENST00000312970 MED14O60244 1454 aa12.65□□□□□ -0.38
TPM3-203ENST00000312970 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
TPM3-203ENST00000312970 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.38
TPM3-203ENST00000312970 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
TPM3-203ENST00000312970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.381e-9■■■■■ 28.9
TPM3-203ENST00000312970 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
TPM3-203ENST00000312970 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
TPM3-203ENST00000312970 MROH1Q8NDA8 1641 aa12.65□□□□□ -0.38
TPM3-203ENST00000312970 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
TPM3-203ENST00000312970 DAPK1P53355 1430 aa12.64□□□□□ -0.39
TPM3-203ENST00000312970 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
TPM3-203ENST00000312970 ERBINQ96RT1 1412 aa12.63□□□□□ -0.39
TPM3-203ENST00000312970 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
TPM3-203ENST00000312970 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
TPM3-203ENST00000312970 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
TPM3-203ENST00000312970 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
TPM3-203ENST00000312970 CROCC2H7BZ55 1655 aa12.62□□□□□ -0.39
TPM3-203ENST00000312970 KANK1Q14678 1352 aa12.62□□□□□ -0.39
TPM3-203ENST00000312970 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
TPM3-203ENST00000312970 SYNMO15061 1565 aa12.61□□□□□ -0.39
TPM3-203ENST00000312970 MSH5O43196 834 aa12.61□□□□□ -0.39
TPM3-203ENST00000312970 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
TPM3-203ENST00000312970 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
TPM3-203ENST00000312970 PRDM15P57071 1507 aaPredicted RBP12.58□□□□□ -0.4
TPM3-203ENST00000312970 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
TPM3-203ENST00000312970 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
TPM3-203ENST00000312970 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
TPM3-203ENST00000312970 LTKP29376 864 aa12.57□□□□□ -0.4
TPM3-203ENST00000312970 IDI1Q13907 227 aa12.56□□□□□ -0.4
TPM3-203ENST00000312970 SCAF11Q99590 1463 aaKnown RBP12.56□□□□□ -0.4
TPM3-203ENST00000312970 SLIT1O75093 1534 aa12.55□□□□□ -0.4
TPM3-203ENST00000312970 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
TPM3-203ENST00000312970 ADGRL2O95490 1459 aa12.54□□□□□ -0.4
TPM3-203ENST00000312970 ARHGAP23Q9P227 1491 aa12.54□□□□□ -0.4
TPM3-203ENST00000312970 LMTK2Q8IWU2 1503 aa12.54□□□□□ -0.4
TPM3-203ENST00000312970 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
TPM3-203ENST00000312970 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
TPM3-203ENST00000312970 SLC52A1Q9NWF4 448 aa12.53□□□□□ -0.4
TPM3-203ENST00000312970 KDM5AP29375 1690 aaKnown RBP12.52□□□□□ -0.4
TPM3-203ENST00000312970 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms