RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 CCDC9Q9Y3X0 531 aaKnown RBP23.61■■□□□ 1.37
NR1D2-201ENST00000312521 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
NR1D2-201ENST00000312521 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
NR1D2-201ENST00000312521 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
NR1D2-201ENST00000312521 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
NR1D2-201ENST00000312521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.59■■□□□ 1.37
NR1D2-201ENST00000312521 KIF15Q9NS87 1388 aa23.59■■□□□ 1.37
NR1D2-201ENST00000312521 ST18O60284 1047 aa23.58■■□□□ 1.37
NR1D2-201ENST00000312521 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
NR1D2-201ENST00000312521 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
NR1D2-201ENST00000312521 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
NR1D2-201ENST00000312521 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
NR1D2-201ENST00000312521 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
NR1D2-201ENST00000312521 ST20-MTHFSA0A0A6YYL1 179 aa23.55■■□□□ 1.36
NR1D2-201ENST00000312521 NOL8Q76FK4 1167 aaKnown RBP23.54■■□□□ 1.36
NR1D2-201ENST00000312521 RASSF8Q8NHQ8 419 aa23.54■■□□□ 1.36
NR1D2-201ENST00000312521 NOC3LQ8WTT2 800 aaKnown RBP23.54■■□□□ 1.36
NR1D2-201ENST00000312521 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
NR1D2-201ENST00000312521 PANK3Q9H999 370 aa23.53■■□□□ 1.36
NR1D2-201ENST00000312521 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
NR1D2-201ENST00000312521 NUTM2FA1L443 756 aa23.52■■□□□ 1.36
NR1D2-201ENST00000312521 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
NR1D2-201ENST00000312521 TOMM22Q9NS69 142 aa23.51■■□□□ 1.35
NR1D2-201ENST00000312521 GTF2E1P29083 439 aaPredicted RBP23.51■■□□□ 1.35
NR1D2-201ENST00000312521 FOXD4L1Q9NU39 408 aa23.51■■□□□ 1.35
NR1D2-201ENST00000312521 RRP7AQ9Y3A4 280 aaKnown RBP23.51■■□□□ 1.35
NR1D2-201ENST00000312521 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
NR1D2-201ENST00000312521 PHF14O94880 888 aa23.5■■□□□ 1.35
NR1D2-201ENST00000312521 G3V3G9 751 aa23.5■■□□□ 1.35
NR1D2-201ENST00000312521 DCAF8Q5TAQ9 597 aa23.5■■□□□ 1.35
NR1D2-201ENST00000312521 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
NR1D2-201ENST00000312521 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
NR1D2-201ENST00000312521 SF3A1Q15459 793 aaKnown RBP23.48■■□□□ 1.35
NR1D2-201ENST00000312521 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
NR1D2-201ENST00000312521 E9PSI1 815 aa23.46■■□□□ 1.35
NR1D2-201ENST00000312521 CGNL1Q0VF96 1302 aa23.46■■□□□ 1.35
NR1D2-201ENST00000312521 UACAQ9BZF9 1416 aa23.46■■□□□ 1.35
NR1D2-201ENST00000312521 COG3Q96JB2 828 aa23.46■■□□□ 1.35
NR1D2-201ENST00000312521 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
NR1D2-201ENST00000312521 ZKSCAN2Q63HK3 967 aa23.46■■□□□ 1.35
NR1D2-201ENST00000312521 CHMP4CQ96CF2 233 aa23.45■■□□□ 1.34
NR1D2-201ENST00000312521 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
NR1D2-201ENST00000312521 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
NR1D2-201ENST00000312521 DDX11L8A8MPP1 907 aa23.43■■□□□ 1.34
NR1D2-201ENST00000312521 ANKRD45Q5TZF3 282 aa23.43■■□□□ 1.34
NR1D2-201ENST00000312521 PRKRIP1Q9H875 184 aaPredicted RBP23.42■■□□□ 1.34
NR1D2-201ENST00000312521 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
NR1D2-201ENST00000312521 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
NR1D2-201ENST00000312521 RILPL2Q969X0 211 aa23.41■■□□□ 1.34
NR1D2-201ENST00000312521 CREBRFQ8IUR6 639 aa23.41■■□□□ 1.34
NR1D2-201ENST00000312521 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
NR1D2-201ENST00000312521 MARCH6O60337 910 aa23.4■■□□□ 1.34
NR1D2-201ENST00000312521 ATP6V1DQ9Y5K8 247 aa23.4■■□□□ 1.34
NR1D2-201ENST00000312521 TPM3P06753 285 aa23.39■■□□□ 1.34
NR1D2-201ENST00000312521 TEFQ10587 303 aa23.39■■□□□ 1.34
NR1D2-201ENST00000312521 ARID3AQ99856 593 aa23.39■■□□□ 1.33
NR1D2-201ENST00000312521 H3BQV1 296 aa23.39■■□□□ 1.33
NR1D2-201ENST00000312521 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
NR1D2-201ENST00000312521 FOXD4L5Q5VV16 416 aaPredicted RBP23.38■■□□□ 1.33
NR1D2-201ENST00000312521 GOLGA6L1Q8N7Z2 621 aa23.38■■□□□ 1.33
NR1D2-201ENST00000312521 FOXD4L4Q8WXT5 416 aaPredicted RBP23.38■■□□□ 1.33
NR1D2-201ENST00000312521 PDE4AP27815 886 aa23.37■■□□□ 1.33
NR1D2-201ENST00000312521 FAM184AQ8NB25 1140 aa23.37■■□□□ 1.33
NR1D2-201ENST00000312521 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
NR1D2-201ENST00000312521 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
NR1D2-201ENST00000312521 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
NR1D2-201ENST00000312521 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
NR1D2-201ENST00000312521 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
NR1D2-201ENST00000312521 CEP89Q96ST8 783 aa23.35■■□□□ 1.33
NR1D2-201ENST00000312521 PLIN1O60240 522 aa23.34■■□□□ 1.33
NR1D2-201ENST00000312521 LRRFIP1Q32MZ4 808 aaKnown RBP23.34■■□□□ 1.33
NR1D2-201ENST00000312521 ZBED9Q6R2W3 1325 aa23.34■■□□□ 1.33
NR1D2-201ENST00000312521 DDX49Q9Y6V7 483 aaKnown RBP23.34■■□□□ 1.33
NR1D2-201ENST00000312521 COG6Q9Y2V7 657 aa23.33■■□□□ 1.33
NR1D2-201ENST00000312521 USP47Q96K76 1375 aa23.33■■□□□ 1.33
NR1D2-201ENST00000312521 A0A0U1RQG5 324 aaPredicted RBP23.33■■□□□ 1.33
NR1D2-201ENST00000312521 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.33
NR1D2-201ENST00000312521 APAF1O14727 1248 aa23.33■■□□□ 1.32
NR1D2-201ENST00000312521 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.32
NR1D2-201ENST00000312521 AKAP17AQ02040 695 aaKnown RBP23.32■■□□□ 1.32
NR1D2-201ENST00000312521 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
NR1D2-201ENST00000312521 SKOR2Q2VWA4 1001 aaPredicted RBP23.32■■□□□ 1.32
NR1D2-201ENST00000312521 CPLX2Q6PUV4 134 aaKnown RBP23.31■■□□□ 1.32
NR1D2-201ENST00000312521 RUFY2Q8WXA3 655 aa23.31■■□□□ 1.32
NR1D2-201ENST00000312521 CRBNQ96SW2 442 aa23.31■■□□□ 1.32
NR1D2-201ENST00000312521 MINK1Q8N4C8 1332 aaPredicted RBP23.31■■□□□ 1.32
NR1D2-201ENST00000312521 VPS53Q5VIR6 699 aa23.31■■□□□ 1.32
NR1D2-201ENST00000312521 DDX19BQ9UMR2 479 aa23.31■■□□□ 1.32
NR1D2-201ENST00000312521 TTC5Q8N0Z6 440 aa23.3■■□□□ 1.32
NR1D2-201ENST00000312521 SYNE3Q6ZMZ3 975 aa23.3■■□□□ 1.32
NR1D2-201ENST00000312521 REC8O95072 547 aa23.29■■□□□ 1.32
NR1D2-201ENST00000312521 C9orf78Q9NZ63 289 aaPredicted RBP23.29■■□□□ 1.32
NR1D2-201ENST00000312521 TPD52L1Q16890 204 aaPredicted RBP23.29■■□□□ 1.32
NR1D2-201ENST00000312521 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
NR1D2-201ENST00000312521 API5Q9BZZ5 524 aaKnown RBP23.29■■□□□ 1.32
NR1D2-201ENST00000312521 GOLGA6L19H0YKK7 550 aa23.29■■□□□ 1.32
NR1D2-201ENST00000312521 AMER1Q5JTC6 1135 aaPredicted RBP23.29■■□□□ 1.32
NR1D2-201ENST00000312521 PTPRGP23470 1445 aa23.29■■□□□ 1.32
NR1D2-201ENST00000312521 BECN2A8MW95 431 aa23.28■■□□□ 1.32
NR1D2-201ENST00000312521 PES1O00541 588 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms