RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
SCUBE2-201ENST00000309263 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
SCUBE2-201ENST00000309263 ABCC5O15440 1437 aa18.96■□□□□ 0.63
SCUBE2-201ENST00000309263 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
SCUBE2-201ENST00000309263 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
SCUBE2-201ENST00000309263 LRRIQ1Q96JM4 1722 aa18.95■□□□□ 0.62
SCUBE2-201ENST00000309263 RALBP1Q15311 655 aa18.94■□□□□ 0.62
SCUBE2-201ENST00000309263 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
SCUBE2-201ENST00000309263 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
SCUBE2-201ENST00000309263 ARXQ96QS3 562 aa18.93■□□□□ 0.62
SCUBE2-201ENST00000309263 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
SCUBE2-201ENST00000309263 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-201ENST00000309263 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
SCUBE2-201ENST00000309263 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
SCUBE2-201ENST00000309263 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
SCUBE2-201ENST00000309263 ABCA8O94911 1581 aa18.91■□□□□ 0.62
SCUBE2-201ENST00000309263 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
SCUBE2-201ENST00000309263 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
SCUBE2-201ENST00000309263 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
SCUBE2-201ENST00000309263 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
SCUBE2-201ENST00000309263 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
SCUBE2-201ENST00000309263 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCUBE2-201ENST00000309263 NFKBIBQ15653 356 aa18.87■□□□□ 0.61
SCUBE2-201ENST00000309263 ATP10BO94823 1461 aa18.87■□□□□ 0.61
SCUBE2-201ENST00000309263 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
SCUBE2-201ENST00000309263 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
SCUBE2-201ENST00000309263 HNRNPMP52272 730 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCUBE2-201ENST00000309263 PANK3Q9H999 370 aa18.85■□□□□ 0.61
SCUBE2-201ENST00000309263 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
SCUBE2-201ENST00000309263 GSE1Q14687 1217 aa18.85■□□□□ 0.61
SCUBE2-201ENST00000309263 USP35Q9P2H5 1018 aa18.84■□□□□ 0.61
SCUBE2-201ENST00000309263 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
SCUBE2-201ENST00000309263 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
SCUBE2-201ENST00000309263 ROCK1Q13464 1354 aa18.84■□□□□ 0.61
SCUBE2-201ENST00000309263 MS4A1P11836 297 aa18.84■□□□□ 0.61
SCUBE2-201ENST00000309263 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.61
SCUBE2-201ENST00000309263 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.6
SCUBE2-201ENST00000309263 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.6
SCUBE2-201ENST00000309263 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
SCUBE2-201ENST00000309263 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
SCUBE2-201ENST00000309263 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
SCUBE2-201ENST00000309263 PZPP20742 1482 aa18.8■□□□□ 0.6
SCUBE2-201ENST00000309263 TROQ12816 1431 aaPredicted RBP18.8■□□□□ 0.6
SCUBE2-201ENST00000309263 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
SCUBE2-201ENST00000309263 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
SCUBE2-201ENST00000309263 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
SCUBE2-201ENST00000309263 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
SCUBE2-201ENST00000309263 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
SCUBE2-201ENST00000309263 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
SCUBE2-201ENST00000309263 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
SCUBE2-201ENST00000309263 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
SCUBE2-201ENST00000309263 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
SCUBE2-201ENST00000309263 CAMSAP2Q08AD1 1489 aa18.72■□□□□ 0.59
SCUBE2-201ENST00000309263 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
SCUBE2-201ENST00000309263 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
SCUBE2-201ENST00000309263 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
SCUBE2-201ENST00000309263 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
SCUBE2-201ENST00000309263 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
SCUBE2-201ENST00000309263 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
SCUBE2-201ENST00000309263 TMF1P82094 1093 aa18.7■□□□□ 0.58
SCUBE2-201ENST00000309263 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.7■□□□□ 0.58
SCUBE2-201ENST00000309263 SPRYD3Q8NCJ5 442 aa18.7■□□□□ 0.58
SCUBE2-201ENST00000309263 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
SCUBE2-201ENST00000309263 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
SCUBE2-201ENST00000309263 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
SCUBE2-201ENST00000309263 GOLGA2Q08379 1002 aa18.67■□□□□ 0.58
SCUBE2-201ENST00000309263 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
SCUBE2-201ENST00000309263 KDM5CP41229 1560 aa18.66■□□□□ 0.58
SCUBE2-201ENST00000309263 BCAR3O75815 825 aa18.65■□□□□ 0.58
SCUBE2-201ENST00000309263 KIF14Q15058 1648 aa18.65■□□□□ 0.58
SCUBE2-201ENST00000309263 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
SCUBE2-201ENST00000309263 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
SCUBE2-201ENST00000309263 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
SCUBE2-201ENST00000309263 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.57
SCUBE2-201ENST00000309263 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
SCUBE2-201ENST00000309263 PARD3Q8TEW0 1356 aa18.63■□□□□ 0.57
SCUBE2-201ENST00000309263 APAF1O14727 1248 aa18.63■□□□□ 0.57
SCUBE2-201ENST00000309263 ASXL2Q76L83 1435 aa18.63■□□□□ 0.57
SCUBE2-201ENST00000309263 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
SCUBE2-201ENST00000309263 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
SCUBE2-201ENST00000309263 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
SCUBE2-201ENST00000309263 GPATCH8Q9UKJ3 1502 aaKnown RBP18.62■□□□□ 0.57
SCUBE2-201ENST00000309263 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
SCUBE2-201ENST00000309263 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
SCUBE2-201ENST00000309263 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
SCUBE2-201ENST00000309263 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
SCUBE2-201ENST00000309263 PPP2R1AP30153 589 aa18.59■□□□□ 0.57
SCUBE2-201ENST00000309263 GZF1Q9H116 711 aaPredicted RBP18.59■□□□□ 0.57
SCUBE2-201ENST00000309263 POGKQ9P215 609 aa18.58■□□□□ 0.56
SCUBE2-201ENST00000309263 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.56
SCUBE2-201ENST00000309263 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
SCUBE2-201ENST00000309263 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
SCUBE2-201ENST00000309263 PANK1Q8TE04 598 aa18.57■□□□□ 0.56
SCUBE2-201ENST00000309263 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
SCUBE2-201ENST00000309263 TESK2Q96S53 571 aa18.56■□□□□ 0.56
SCUBE2-201ENST00000309263 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
SCUBE2-201ENST00000309263 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
SCUBE2-201ENST00000309263 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
SCUBE2-201ENST00000309263 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
SCUBE2-201ENST00000309263 UHRF1BP1Q6BDS2 1440 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms