RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GSE1Q14687 1217 aa14.6□□□□□ -0.07
PTPN7-201ENST00000309017 BRPF3Q9ULD4 1205 aa14.6□□□□□ -0.07
PTPN7-201ENST00000309017 CAMSAP2Q08AD1 1489 aa14.6□□□□□ -0.07
PTPN7-201ENST00000309017 WDR43Q15061 677 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN7-201ENST00000309017 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
PTPN7-201ENST00000309017 POLR1AO95602 1720 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-201ENST00000309017 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
PTPN7-201ENST00000309017 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 PANK3Q9H999 370 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 KDM5CP41229 1560 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 KIF14Q15058 1648 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
PTPN7-201ENST00000309017 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-201ENST00000309017 NBPF1Q3BBV0 1214 aa14.56□□□□□ -0.08
PTPN7-201ENST00000309017 TROQ12816 1431 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-201ENST00000309017 HNRNPMP52272 730 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPN7-201ENST00000309017 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
PTPN7-201ENST00000309017 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-201ENST00000309017 FRAT1Q92837 279 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-201ENST00000309017 CENPQQ7L2Z9 268 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-201ENST00000309017 TMF1P82094 1093 aa14.53□□□□□ -0.08
PTPN7-201ENST00000309017 FAM161AQ3B820 660 aa14.53□□□□□ -0.08
PTPN7-201ENST00000309017 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.09
PTPN7-201ENST00000309017 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.09
PTPN7-201ENST00000309017 UHRF1BP1Q6BDS2 1440 aa14.51□□□□□ -0.09
PTPN7-201ENST00000309017 PARD3Q8TEW0 1356 aa14.51□□□□□ -0.09
PTPN7-201ENST00000309017 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
PTPN7-201ENST00000309017 WASHC2CQ9Y4E1 1318 aa14.5□□□□□ -0.09
PTPN7-201ENST00000309017 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
PTPN7-201ENST00000309017 C9orf84Q5VXU9 1444 aa14.5□□□□□ -0.09
PTPN7-201ENST00000309017 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
PTPN7-201ENST00000309017 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
PTPN7-201ENST00000309017 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
PTPN7-201ENST00000309017 PLB1Q6P1J6 1458 aa14.48□□□□□ -0.09
PTPN7-201ENST00000309017 PER1O15534 1290 aaPredicted RBP14.48□□□□□ -0.09
PTPN7-201ENST00000309017 KIAA0586Q9BVV6 1533 aa14.48□□□□□ -0.09
PTPN7-201ENST00000309017 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
PTPN7-201ENST00000309017 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
PTPN7-201ENST00000309017 CCDC146Q8IYE0 955 aa14.47□□□□□ -0.09
PTPN7-201ENST00000309017 ARXQ96QS3 562 aa14.47□□□□□ -0.09
PTPN7-201ENST00000309017 DISP1Q96F81 1524 aa14.45□□□□□ -0.1
PTPN7-201ENST00000309017 ARHGEF12Q9NZN5 1544 aa14.45□□□□□ -0.1
PTPN7-201ENST00000309017 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
PTPN7-201ENST00000309017 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
PTPN7-201ENST00000309017 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
PTPN7-201ENST00000309017 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
PTPN7-201ENST00000309017 ADGRL2O95490 1459 aa14.44□□□□□ -0.1
PTPN7-201ENST00000309017 SLKQ9H2G2 1235 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-201ENST00000309017 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
PTPN7-201ENST00000309017 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
PTPN7-201ENST00000309017 C8orf34Q49A92 452 aa14.42□□□□□ -0.1
PTPN7-201ENST00000309017 JPH4Q96JJ6 628 aa14.42□□□□□ -0.1
PTPN7-201ENST00000309017 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-201ENST00000309017 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
PTPN7-201ENST00000309017 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
PTPN7-201ENST00000309017 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
PTPN7-201ENST00000309017 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
PTPN7-201ENST00000309017 ERBINQ96RT1 1412 aa14.4□□□□□ -0.1
PTPN7-201ENST00000309017 BECN1Q14457 450 aa14.4□□□□□ -0.1
PTPN7-201ENST00000309017 PRAG1Q86YV5 1406 aa14.4□□□□□ -0.1
PTPN7-201ENST00000309017 TESK2Q96S53 571 aa14.39□□□□□ -0.11
PTPN7-201ENST00000309017 APAF1O14727 1248 aa14.39□□□□□ -0.11
PTPN7-201ENST00000309017 BLMP54132 1417 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-201ENST00000309017 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
PTPN7-201ENST00000309017 BCAR3O75815 825 aa14.38□□□□□ -0.11
PTPN7-201ENST00000309017 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
PTPN7-201ENST00000309017 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
PTPN7-201ENST00000309017 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
PTPN7-201ENST00000309017 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
PTPN7-201ENST00000309017 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
PTPN7-201ENST00000309017 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-201ENST00000309017 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
PTPN7-201ENST00000309017 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
PTPN7-201ENST00000309017 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
PTPN7-201ENST00000309017 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
PTPN7-201ENST00000309017 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.11
PTPN7-201ENST00000309017 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-201ENST00000309017 POGKQ9P215 609 aa14.32□□□□□ -0.12
PTPN7-201ENST00000309017 FAM135AQ9P2D6 1515 aa14.32□□□□□ -0.12
PTPN7-201ENST00000309017 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
PTPN7-201ENST00000309017 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
PTPN7-201ENST00000309017 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
PTPN7-201ENST00000309017 E9PSI1 815 aa14.31□□□□□ -0.12
PTPN7-201ENST00000309017 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-201ENST00000309017 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
PTPN7-201ENST00000309017 IGHDP01880 384 aa14.3□□□□□ -0.12
PTPN7-201ENST00000309017 RSPH4AQ5TD94 716 aa14.3□□□□□ -0.12
PTPN7-201ENST00000309017 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-201ENST00000309017 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-201ENST00000309017 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
PTPN7-201ENST00000309017 E9PCH4 1651 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 KDM5DQ9BY66 1539 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 A2MP01023 1474 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 CGNL1Q0VF96 1302 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 INSRP06213 1382 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 CLUAP1Q96AJ1 413 aa14.29□□□□□ -0.12
PTPN7-201ENST00000309017 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms