RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
MSRB3-201ENST00000308259 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.21
MSRB3-201ENST00000308259 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
MSRB3-201ENST00000308259 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
MSRB3-201ENST00000308259 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
MSRB3-201ENST00000308259 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
MSRB3-201ENST00000308259 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.22
MSRB3-201ENST00000308259 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.22
MSRB3-201ENST00000308259 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
MSRB3-201ENST00000308259 FAM43AQ8N2R8 423 aa13.7□□□□□ -0.22
MSRB3-201ENST00000308259 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
MSRB3-201ENST00000308259 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
MSRB3-201ENST00000308259 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 DDRGK1Q96HY6 314 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 PZPP20742 1482 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 NUP155O75694 1391 aa13.69□□□□□ -0.22
MSRB3-201ENST00000308259 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-201ENST00000308259 DHX29Q7Z478 1369 aaKnown RBP13.67□□□□□ -0.22
MSRB3-201ENST00000308259 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
MSRB3-201ENST00000308259 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
MSRB3-201ENST00000308259 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
MSRB3-201ENST00000308259 RRP9O43818 475 aaKnown RBP13.65□□□□□ -0.22
MSRB3-201ENST00000308259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSRB3-201ENST00000308259 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
MSRB3-201ENST00000308259 DNMT1P26358 1616 aaKnown RBP13.65□□□□□ -0.22
MSRB3-201ENST00000308259 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
MSRB3-201ENST00000308259 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
MSRB3-201ENST00000308259 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
MSRB3-201ENST00000308259 NFKBIBQ15653 356 aa13.63□□□□□ -0.23
MSRB3-201ENST00000308259 GPATCH8Q9UKJ3 1502 aaKnown RBP13.63□□□□□ -0.23
MSRB3-201ENST00000308259 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
MSRB3-201ENST00000308259 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
MSRB3-201ENST00000308259 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
MSRB3-201ENST00000308259 ANKRD50Q9ULJ7 1429 aa13.63□□□□□ -0.23
MSRB3-201ENST00000308259 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
MSRB3-201ENST00000308259 TRIM44Q96DX7 344 aaPredicted RBP13.62□□□□□ -0.23
MSRB3-201ENST00000308259 KIF14Q15058 1648 aa13.62□□□□□ -0.23
MSRB3-201ENST00000308259 ANKRD30AQ9BXX3 1397 aa13.62□□□□□ -0.23
MSRB3-201ENST00000308259 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
MSRB3-201ENST00000308259 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
MSRB3-201ENST00000308259 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
MSRB3-201ENST00000308259 FGD1P98174 961 aa13.61□□□□□ -0.23
MSRB3-201ENST00000308259 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
MSRB3-201ENST00000308259 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
MSRB3-201ENST00000308259 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
MSRB3-201ENST00000308259 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
MSRB3-201ENST00000308259 RGS3P49796 1198 aa13.58□□□□□ -0.24
MSRB3-201ENST00000308259 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
MSRB3-201ENST00000308259 AAMPQ13685 434 aa13.57□□□□□ -0.24
MSRB3-201ENST00000308259 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
MSRB3-201ENST00000308259 L1TD1Q5T7N2 865 aaKnown RBP13.57□□□□□ -0.24
MSRB3-201ENST00000308259 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
MSRB3-201ENST00000308259 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
MSRB3-201ENST00000308259 PLIN1O60240 522 aa13.55□□□□□ -0.24
MSRB3-201ENST00000308259 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
MSRB3-201ENST00000308259 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
MSRB3-201ENST00000308259 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
MSRB3-201ENST00000308259 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
MSRB3-201ENST00000308259 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
MSRB3-201ENST00000308259 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
MSRB3-201ENST00000308259 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
MSRB3-201ENST00000308259 KANK1Q14678 1352 aa13.54□□□□□ -0.24
MSRB3-201ENST00000308259 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
MSRB3-201ENST00000308259 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
MSRB3-201ENST00000308259 PDE4AP27815 886 aa13.53□□□□□ -0.24
MSRB3-201ENST00000308259 WASHC2CQ9Y4E1 1318 aa13.53□□□□□ -0.24
MSRB3-201ENST00000308259 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.24
MSRB3-201ENST00000308259 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
MSRB3-201ENST00000308259 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
MSRB3-201ENST00000308259 FRAT2O75474 233 aaPredicted RBP13.51□□□□□ -0.25
MSRB3-201ENST00000308259 KDM5CP41229 1560 aa13.51□□□□□ -0.25
MSRB3-201ENST00000308259 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
MSRB3-201ENST00000308259 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
MSRB3-201ENST00000308259 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
MSRB3-201ENST00000308259 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
MSRB3-201ENST00000308259 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
MSRB3-201ENST00000308259 ATP10BO94823 1461 aa13.48□□□□□ -0.25
MSRB3-201ENST00000308259 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
MSRB3-201ENST00000308259 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
MSRB3-201ENST00000308259 RALGAPBQ86X10 1494 aa13.47□□□□□ -0.25
MSRB3-201ENST00000308259 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
MSRB3-201ENST00000308259 PANK3Q9H999 370 aa13.47□□□□□ -0.25
MSRB3-201ENST00000308259 RALBP1Q15311 655 aa13.47□□□□□ -0.25
MSRB3-201ENST00000308259 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
MSRB3-201ENST00000308259 ZHX1Q9UKY1 873 aaPredicted RBP13.46□□□□□ -0.25
MSRB3-201ENST00000308259 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
MSRB3-201ENST00000308259 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
MSRB3-201ENST00000308259 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
MSRB3-201ENST00000308259 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
MSRB3-201ENST00000308259 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
MSRB3-201ENST00000308259 RRAGDQ9NQL2 400 aaPredicted RBP13.44□□□□□ -0.26
MSRB3-201ENST00000308259 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
MSRB3-201ENST00000308259 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
MSRB3-201ENST00000308259 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
MSRB3-201ENST00000308259 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
MSRB3-201ENST00000308259 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
MSRB3-201ENST00000308259 UHRF1BP1Q6BDS2 1440 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms