RNA–Protein interactions for RNA: ENST00000307266.7

COPS9-201, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 1 (best) BASIC

Gene COPS9, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-201ENST00000307266 PTPRMP28827 1452 aa30.12■■■□□ 2.41
COPS9-201ENST00000307266 CNTLNQ9NXG0 1405 aa30.12■■■□□ 2.41
COPS9-201ENST00000307266 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
COPS9-201ENST00000307266 ANKRD50Q9ULJ7 1429 aa30.06■■■□□ 2.4
COPS9-201ENST00000307266 WASHC2CQ9Y4E1 1318 aa30.06■■■□□ 2.4
COPS9-201ENST00000307266 RNF17Q9BXT8 1623 aaKnown RBP30.05■■■□□ 2.4
COPS9-201ENST00000307266 KANK1Q14678 1352 aa30.03■■■□□ 2.4
COPS9-201ENST00000307266 FAM135AQ9P2D6 1515 aa30.02■■■□□ 2.4
COPS9-201ENST00000307266 CLTCQ00610 1675 aaKnown RBP30.02■■■□□ 2.4
COPS9-201ENST00000307266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.02■■■□□ 2.4
COPS9-201ENST00000307266 KDM5DQ9BY66 1539 aa30.01■■■□□ 2.4
COPS9-201ENST00000307266 MROH2AA6NES4 1674 aa29.99■■■□□ 2.39
COPS9-201ENST00000307266 ZMYM3Q14202 1370 aa29.96■■■□□ 2.39
COPS9-201ENST00000307266 CEBPAP49715 358 aaPredicted RBP29.96■■■□□ 2.39
COPS9-201ENST00000307266 ZC3H13Q5T200 1668 aaKnown RBP29.95■■■□□ 2.38
COPS9-201ENST00000307266 PRDM15P57071 1507 aaPredicted RBP29.94■■■□□ 2.38
COPS9-201ENST00000307266 DEPDC5O75140 1603 aa29.93■■■□□ 2.38
COPS9-201ENST00000307266 C3P01024 1663 aa29.93■■■□□ 2.38
COPS9-201ENST00000307266 MROH1Q8NDA8 1641 aa29.92■■■□□ 2.38
COPS9-201ENST00000307266 HFM1A2PYH4 1435 aa29.9■■■□□ 2.38
COPS9-201ENST00000307266 ABCC3O15438 1527 aa29.9■■■□□ 2.38
COPS9-201ENST00000307266 GCC2Q8IWJ2 1684 aa29.89■■■□□ 2.38
COPS9-201ENST00000307266 NAIPQ13075 1403 aa29.88■■■□□ 2.37
COPS9-201ENST00000307266 CEP152O94986 1710 aa29.86■■■□□ 2.37
COPS9-201ENST00000307266 UNC13BO14795 1591 aa29.83■■■□□ 2.37
COPS9-201ENST00000307266 NPATQ14207 1427 aa29.83■■■□□ 2.37
COPS9-201ENST00000307266 CAMSAP1Q5T5Y3 1602 aa29.82■■■□□ 2.36
COPS9-201ENST00000307266 PZPP20742 1482 aa29.81■■■□□ 2.36
COPS9-201ENST00000307266 NUP155O75694 1391 aa29.8■■■□□ 2.36
COPS9-201ENST00000307266 VWDEQ8N2E2 1590 aa29.78■■■□□ 2.36
COPS9-201ENST00000307266 LMTK2Q8IWU2 1503 aa29.77■■■□□ 2.36
COPS9-201ENST00000307266 TRIM52Q96A61 297 aa29.77■■■□□ 2.36
COPS9-201ENST00000307266 UHRF1BP1Q6BDS2 1440 aa29.77■■■□□ 2.36
COPS9-201ENST00000307266 PREX1Q8TCU6 1659 aa29.76■■■□□ 2.36
COPS9-201ENST00000307266 SETD1BQ9UPS6 1966 aaKnown RBP29.75■■■□□ 2.35
COPS9-201ENST00000307266 FBXO31Q5XUX0 539 aaPredicted RBP29.74■■■□□ 2.35
COPS9-201ENST00000307266 ARHGAP31Q2M1Z3 1444 aa29.73■■■□□ 2.35
COPS9-201ENST00000307266 TNRQ92752 1358 aa29.73■■■□□ 2.35
COPS9-201ENST00000307266 SETD5Q9C0A6 1442 aa29.72■■■□□ 2.35
COPS9-201ENST00000307266 ACIN1Q9UKV3 1341 aaKnown RBP29.71■■■□□ 2.35
COPS9-201ENST00000307266 IQGAP3Q86VI3 1631 aa29.71■■■□□ 2.35
COPS9-201ENST00000307266 EFCAB6Q5THR3 1501 aa29.71■■■□□ 2.35
COPS9-201ENST00000307266 TET3O43151 1660 aa29.7■■■□□ 2.35
COPS9-201ENST00000307266 ERVK-7P63135 1459 aa29.67■■■□□ 2.34
COPS9-201ENST00000307266 LMTK3Q96Q04 1460 aa29.67■■■□□ 2.34
COPS9-201ENST00000307266 RPRD2Q5VT52 1461 aaKnown RBP29.65■■■□□ 2.34
COPS9-201ENST00000307266 MYO3AQ8NEV4 1616 aa29.64■■■□□ 2.34
COPS9-201ENST00000307266 CFAP65Q6ZU64 1925 aaKnown RBP29.64■■■□□ 2.34
COPS9-201ENST00000307266 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
COPS9-201ENST00000307266 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
COPS9-201ENST00000307266 NLRP1Q9C000 1473 aa29.61■■■□□ 2.33
COPS9-201ENST00000307266 RAB3GAP2Q9H2M9 1393 aa29.6■■■□□ 2.33
COPS9-201ENST00000307266 SLC4A1APQ9BWU0 796 aaKnown RBP29.59■■■□□ 2.33
COPS9-201ENST00000307266 HSPA2P54652 639 aa29.58■■■□□ 2.33
COPS9-201ENST00000307266 CEP170BQ9Y4F5 1589 aaPredicted RBP29.58■■■□□ 2.33
COPS9-201ENST00000307266 A2ML1A8K2U0 1454 aa29.57■■■□□ 2.32
COPS9-201ENST00000307266 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
COPS9-201ENST00000307266 E9PCH4 1651 aa29.55■■■□□ 2.32
COPS9-201ENST00000307266 STAG3Q9UJ98 1225 aa29.53■■■□□ 2.32
COPS9-201ENST00000307266 PKD2Q13563 968 aa29.51■■■□□ 2.31
COPS9-201ENST00000307266 NOS1P29475 1434 aa29.51■■■□□ 2.31
COPS9-201ENST00000307266 THEMISQ8N1K5 641 aaPredicted RBP29.5■■■□□ 2.31
COPS9-201ENST00000307266 SLC52A1Q9NWF4 448 aa29.5■■■□□ 2.31
COPS9-201ENST00000307266 UGGT1Q9NYU2 1555 aa29.49■■■□□ 2.31
COPS9-201ENST00000307266 HRCP23327 699 aa29.49■■■□□ 2.31
COPS9-201ENST00000307266 SYNMO15061 1565 aa29.47■■■□□ 2.31
COPS9-201ENST00000307266 MPHOSPH9Q99550 1183 aa29.47■■■□□ 2.31
COPS9-201ENST00000307266 IDI1Q13907 227 aa29.43■■■□□ 2.3
COPS9-201ENST00000307266 SPHKAPQ2M3C7 1700 aa29.42■■■□□ 2.3
COPS9-201ENST00000307266 PIK3C2BO00750 1634 aa29.41■■■□□ 2.3
COPS9-201ENST00000307266 CHGAP10645 457 aaKnown RBP29.39■■■□□ 2.3
COPS9-201ENST00000307266 PLA2R1Q13018 1463 aa29.38■■■□□ 2.29
COPS9-201ENST00000307266 DMRT2Q9Y5R5 561 aa29.38■■■□□ 2.29
COPS9-201ENST00000307266 PTPRTO14522 1441 aa29.37■■■□□ 2.29
COPS9-201ENST00000307266 UBR1Q8IWV7 1749 aa29.37■■■□□ 2.29
COPS9-201ENST00000307266 ADGRB3O60242 1522 aa29.35■■■□□ 2.29
COPS9-201ENST00000307266 FOXD1Q16676 465 aa29.35■■■□□ 2.29
COPS9-201ENST00000307266 ANKLE2Q86XL3 938 aa29.35■■■□□ 2.29
COPS9-201ENST00000307266 TRPM2O94759 1503 aa29.35■■■□□ 2.29
COPS9-201ENST00000307266 KDM5AP29375 1690 aaKnown RBP29.34■■■□□ 2.29
COPS9-201ENST00000307266 NCKAP5LQ9HCH0 1330 aa29.32■■■□□ 2.28
COPS9-201ENST00000307266 EID1Q9Y6B2 187 aa29.32■■■□□ 2.28
COPS9-201ENST00000307266 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
COPS9-201ENST00000307266 HDGFP51858 240 aaKnown RBP29.28■■■□□ 2.28
COPS9-201ENST00000307266 CCDC144AA2RUR9 1427 aa29.27■■■□□ 2.28
COPS9-201ENST00000307266 POLR1AO95602 1720 aaPredicted RBP29.26■■■□□ 2.27
COPS9-201ENST00000307266 TMEM2Q9UHN6 1383 aa29.26■■■□□ 2.27
COPS9-201ENST00000307266 CLTCL1P53675 1640 aa29.25■■■□□ 2.27
COPS9-201ENST00000307266 ZNF326Q5BKZ1 582 aaKnown RBP29.25■■■□□ 2.27
COPS9-201ENST00000307266 TXNDC2Q86VQ3 553 aa29.25■■■□□ 2.27
COPS9-201ENST00000307266 TMEM131LA2VDJ0 1609 aa29.24■■■□□ 2.27
COPS9-201ENST00000307266 SLIT1O75093 1534 aa29.24■■■□□ 2.27
COPS9-201ENST00000307266 PPP1R15AO75807 674 aaPredicted RBP29.22■■■□□ 2.27
COPS9-201ENST00000307266 SCAF11Q99590 1463 aaKnown RBP29.22■■■□□ 2.27
COPS9-201ENST00000307266 ARHGAP23Q9P227 1491 aa29.22■■■□□ 2.27
COPS9-201ENST00000307266 KIF1BO60333 1816 aa29.22■■■□□ 2.27
COPS9-201ENST00000307266 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
COPS9-201ENST00000307266 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.2■■■□□ 2.26
COPS9-201ENST00000307266 MYO5BQ9ULV0 1848 aa29.19■■■□□ 2.26
COPS9-201ENST00000307266 NPHP4O75161 1426 aaPredicted RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms