RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
TRIM56-201ENST00000306085 HSP90B2PQ58FF3 399 aa16.5■□□□□ 0.23
TRIM56-201ENST00000306085 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
TRIM56-201ENST00000306085 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
TRIM56-201ENST00000306085 CWC15Q9P013 229 aaKnown RBP16.49■□□□□ 0.23
TRIM56-201ENST00000306085 RAD21O60216 631 aa16.49■□□□□ 0.23
TRIM56-201ENST00000306085 ANKRD20A12PQ8NF67 263 aa16.49■□□□□ 0.23
TRIM56-201ENST00000306085 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
TRIM56-201ENST00000306085 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
TRIM56-201ENST00000306085 FBXW7Q969H0 707 aa16.48■□□□□ 0.23
TRIM56-201ENST00000306085 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
TRIM56-201ENST00000306085 DDX49Q9Y6V7 483 aaKnown RBP16.47■□□□□ 0.23
TRIM56-201ENST00000306085 SKIDA1Q1XH10 827 aa16.46■□□□□ 0.23
TRIM56-201ENST00000306085 HSP90AB2PQ58FF8 381 aa16.46■□□□□ 0.23
TRIM56-201ENST00000306085 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
TRIM56-201ENST00000306085 ARGLU1Q9NWB6 273 aaPredicted RBP16.45■□□□□ 0.22
TRIM56-201ENST00000306085 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
TRIM56-201ENST00000306085 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
TRIM56-201ENST00000306085 TMF1P82094 1093 aa16.45■□□□□ 0.22
TRIM56-201ENST00000306085 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
TRIM56-201ENST00000306085 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
TRIM56-201ENST00000306085 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
TRIM56-201ENST00000306085 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
TRIM56-201ENST00000306085 DHX37Q8IY37 1157 aaKnown RBP16.43■□□□□ 0.22
TRIM56-201ENST00000306085 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
TRIM56-201ENST00000306085 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
TRIM56-201ENST00000306085 MNS1Q8NEH6 495 aa16.43■□□□□ 0.22
TRIM56-201ENST00000306085 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
TRIM56-201ENST00000306085 TSPYL1Q9H0U9 437 aa16.42■□□□□ 0.22
TRIM56-201ENST00000306085 IFT57Q9NWB7 429 aa16.42■□□□□ 0.22
TRIM56-201ENST00000306085 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
TRIM56-201ENST00000306085 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
TRIM56-201ENST00000306085 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
TRIM56-201ENST00000306085 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
TRIM56-201ENST00000306085 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
TRIM56-201ENST00000306085 HOOK1Q9UJC3 728 aaKnown RBP16.4■□□□□ 0.22
TRIM56-201ENST00000306085 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
TRIM56-201ENST00000306085 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
TRIM56-201ENST00000306085 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
TRIM56-201ENST00000306085 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
TRIM56-201ENST00000306085 CLIP1P30622 1438 aa16.39■□□□□ 0.21
TRIM56-201ENST00000306085 EPS15P42566 896 aa16.39■□□□□ 0.21
TRIM56-201ENST00000306085 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
TRIM56-201ENST00000306085 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
TRIM56-201ENST00000306085 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
TRIM56-201ENST00000306085 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM56-201ENST00000306085 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
TRIM56-201ENST00000306085 GSE1Q14687 1217 aa16.38■□□□□ 0.21
TRIM56-201ENST00000306085 DYDC1Q8WWB3 177 aa16.37■□□□□ 0.21
TRIM56-201ENST00000306085 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
TRIM56-201ENST00000306085 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
TRIM56-201ENST00000306085 TRIM29Q14134 588 aa16.37■□□□□ 0.21
TRIM56-201ENST00000306085 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
TRIM56-201ENST00000306085 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
TRIM56-201ENST00000306085 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
TRIM56-201ENST00000306085 PAF1Q8N7H5 531 aa16.36■□□□□ 0.21
TRIM56-201ENST00000306085 STK26Q9P289 416 aa16.35■□□□□ 0.21
TRIM56-201ENST00000306085 CCDC66A2RUB6 948 aa16.35■□□□□ 0.21
TRIM56-201ENST00000306085 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
TRIM56-201ENST00000306085 DCAF11Q8TEB1 546 aa16.35■□□□□ 0.21
TRIM56-201ENST00000306085 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
TRIM56-201ENST00000306085 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
TRIM56-201ENST00000306085 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
TRIM56-201ENST00000306085 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
TRIM56-201ENST00000306085 DHX16O60231 1041 aaKnown RBP16.33■□□□□ 0.21
TRIM56-201ENST00000306085 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.21
TRIM56-201ENST00000306085 NEFHP12036 1026 aa16.33■□□□□ 0.2
TRIM56-201ENST00000306085 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
TRIM56-201ENST00000306085 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.2
TRIM56-201ENST00000306085 ENOX2Q16206 610 aaKnown RBP16.33■□□□□ 0.2
TRIM56-201ENST00000306085 FOSBP53539 338 aa16.33■□□□□ 0.2
TRIM56-201ENST00000306085 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
TRIM56-201ENST00000306085 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
TRIM56-201ENST00000306085 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
TRIM56-201ENST00000306085 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
TRIM56-201ENST00000306085 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
TRIM56-201ENST00000306085 PDILTQ8N807 584 aa16.32■□□□□ 0.2
TRIM56-201ENST00000306085 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
TRIM56-201ENST00000306085 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
TRIM56-201ENST00000306085 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
TRIM56-201ENST00000306085 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
TRIM56-201ENST00000306085 OFD1O75665 1012 aa16.3■□□□□ 0.2
TRIM56-201ENST00000306085 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
TRIM56-201ENST00000306085 KANK1Q14678 1352 aa16.3■□□□□ 0.2
TRIM56-201ENST00000306085 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
TRIM56-201ENST00000306085 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
TRIM56-201ENST00000306085 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
TRIM56-201ENST00000306085 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
TRIM56-201ENST00000306085 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
TRIM56-201ENST00000306085 SEPT7Q16181 437 aaKnown RBP16.28■□□□□ 0.2
TRIM56-201ENST00000306085 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
TRIM56-201ENST00000306085 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
TRIM56-201ENST00000306085 CPLX1O14810 134 aa16.28■□□□□ 0.2
TRIM56-201ENST00000306085 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
TRIM56-201ENST00000306085 MLECQ14165 292 aa16.27■□□□□ 0.2
TRIM56-201ENST00000306085 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.19
TRIM56-201ENST00000306085 CHMP4AQ9BY43 222 aa16.27■□□□□ 0.19
TRIM56-201ENST00000306085 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
TRIM56-201ENST00000306085 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
TRIM56-201ENST00000306085 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms