RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
TMEM88-201ENST00000301599 KDM5DQ9BY66 1539 aa28.35■■■□□ 2.13
TMEM88-201ENST00000301599 ABCC5O15440 1437 aa28.35■■■□□ 2.13
TMEM88-201ENST00000301599 CAMSAP1Q5T5Y3 1602 aa28.34■■■□□ 2.13
TMEM88-201ENST00000301599 NCKAP5LQ9HCH0 1330 aa28.34■■■□□ 2.13
TMEM88-201ENST00000301599 FGD6Q6ZV73 1430 aa28.34■■■□□ 2.13
TMEM88-201ENST00000301599 PKD2Q13563 968 aa28.33■■■□□ 2.13
TMEM88-201ENST00000301599 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
TMEM88-201ENST00000301599 RRP7BPQ9NSQ0 103 aa28.32■■■□□ 2.12
TMEM88-201ENST00000301599 TNRQ92752 1358 aa28.32■■■□□ 2.12
TMEM88-201ENST00000301599 PZPP20742 1482 aa28.31■■■□□ 2.12
TMEM88-201ENST00000301599 MYO3AQ8NEV4 1616 aa28.29■■■□□ 2.12
TMEM88-201ENST00000301599 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
TMEM88-201ENST00000301599 DUOX2Q9NRD8 1548 aa28.28■■■□□ 2.12
TMEM88-201ENST00000301599 TCOF1Q13428 1488 aaKnown RBP28.28■■■□□ 2.12
TMEM88-201ENST00000301599 A2ML1A8K2U0 1454 aa28.27■■■□□ 2.12
TMEM88-201ENST00000301599 SHANK2Q9UPX8 1470 aa28.27■■■□□ 2.12
TMEM88-201ENST00000301599 DAPK1P53355 1430 aa28.27■■■□□ 2.12
TMEM88-201ENST00000301599 KIF15Q9NS87 1388 aa28.27■■■□□ 2.12
TMEM88-201ENST00000301599 PLA2R1Q13018 1463 aa28.26■■■□□ 2.11
TMEM88-201ENST00000301599 CHIC2Q9UKJ5 165 aa28.25■■■□□ 2.11
TMEM88-201ENST00000301599 ZNF142P52746 1687 aaPredicted RBP28.25■■■□□ 2.11
TMEM88-201ENST00000301599 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
TMEM88-201ENST00000301599 RNF17Q9BXT8 1623 aaKnown RBP28.24■■■□□ 2.11
TMEM88-201ENST00000301599 THEMISQ8N1K5 641 aaPredicted RBP28.23■■■□□ 2.11
TMEM88-201ENST00000301599 FAM50AQ14320 339 aaKnown RBP28.22■■■□□ 2.11
TMEM88-201ENST00000301599 ANKRD30AQ9BXX3 1397 aa28.22■■■□□ 2.11
TMEM88-201ENST00000301599 ABCC3O15438 1527 aa28.2■■■□□ 2.1
TMEM88-201ENST00000301599 DNMT1P26358 1616 aaKnown RBP28.2■■■□□ 2.1
TMEM88-201ENST00000301599 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
TMEM88-201ENST00000301599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.18■■■□□ 2.1
TMEM88-201ENST00000301599 NLRP1Q9C000 1473 aa28.17■■■□□ 2.1
TMEM88-201ENST00000301599 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
TMEM88-201ENST00000301599 ANKLE2Q86XL3 938 aa28.16■■■□□ 2.1
TMEM88-201ENST00000301599 ZC3H13Q5T200 1668 aaKnown RBP28.15■■■□□ 2.1
TMEM88-201ENST00000301599 MROH1Q8NDA8 1641 aa28.14■■■□□ 2.09
TMEM88-201ENST00000301599 KANK1Q14678 1352 aa28.13■■■□□ 2.09
TMEM88-201ENST00000301599 LTBP4Q8N2S1 1624 aa28.12■■■□□ 2.09
TMEM88-201ENST00000301599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.11■■■□□ 2.09
TMEM88-201ENST00000301599 ZNF335Q9H4Z2 1342 aaPredicted RBP28.11■■■□□ 2.09
TMEM88-201ENST00000301599 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
TMEM88-201ENST00000301599 UGGT1Q9NYU2 1555 aa28.08■■■□□ 2.09
TMEM88-201ENST00000301599 ARHGAP31Q2M1Z3 1444 aa28.08■■■□□ 2.09
TMEM88-201ENST00000301599 ERVK-7P63135 1459 aa28.08■■■□□ 2.09
TMEM88-201ENST00000301599 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
TMEM88-201ENST00000301599 PRDM15P57071 1507 aaPredicted RBP28.05■■■□□ 2.08
TMEM88-201ENST00000301599 CEP152O94986 1710 aa28.04■■■□□ 2.08
TMEM88-201ENST00000301599 IQSEC2Q5JU85 1478 aa28.03■■■□□ 2.08
TMEM88-201ENST00000301599 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
TMEM88-201ENST00000301599 CFAP65Q6ZU64 1925 aaKnown RBP28■■■□□ 2.07
TMEM88-201ENST00000301599 DEPDC5O75140 1603 aa27.99■■■□□ 2.07
TMEM88-201ENST00000301599 ANKRD50Q9ULJ7 1429 aa27.98■■■□□ 2.07
TMEM88-201ENST00000301599 NPHP4O75161 1426 aaPredicted RBP27.96■■■□□ 2.07
TMEM88-201ENST00000301599 MED14O60244 1454 aa27.95■■■□□ 2.07
TMEM88-201ENST00000301599 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.07
TMEM88-201ENST00000301599 NEURL4Q96JN8 1562 aa27.95■■■□□ 2.07
TMEM88-201ENST00000301599 LMTK2Q8IWU2 1503 aa27.95■■■□□ 2.06
TMEM88-201ENST00000301599 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
TMEM88-201ENST00000301599 VWDEQ8N2E2 1590 aa27.92■■■□□ 2.06
TMEM88-201ENST00000301599 TXNDC2Q86VQ3 553 aa27.92■■■□□ 2.06
TMEM88-201ENST00000301599 UBAP1LF5GYI3 381 aa27.91■■■□□ 2.06
TMEM88-201ENST00000301599 ROCK1Q13464 1354 aa27.9■■■□□ 2.06
TMEM88-201ENST00000301599 ITGAEP38570 1179 aa27.9■■■□□ 2.06
TMEM88-201ENST00000301599 IDI1Q13907 227 aa27.9■■■□□ 2.06
TMEM88-201ENST00000301599 EID1Q9Y6B2 187 aa27.9■■■□□ 2.06
TMEM88-201ENST00000301599 LTKP29376 864 aa27.87■■■□□ 2.05
TMEM88-201ENST00000301599 SLC52A1Q9NWF4 448 aa27.87■■■□□ 2.05
TMEM88-201ENST00000301599 UBR1Q8IWV7 1749 aa27.86■■■□□ 2.05
TMEM88-201ENST00000301599 CPS1P31327 1500 aa27.85■■■□□ 2.05
TMEM88-201ENST00000301599 NOS1P29475 1434 aa27.84■■■□□ 2.05
TMEM88-201ENST00000301599 SCAF11Q99590 1463 aaKnown RBP27.83■■■□□ 2.04
TMEM88-201ENST00000301599 ARHGAP23Q9P227 1491 aa27.83■■■□□ 2.04
TMEM88-201ENST00000301599 TMEM2Q9UHN6 1383 aa27.82■■■□□ 2.04
TMEM88-201ENST00000301599 SLIT1O75093 1534 aa27.82■■■□□ 2.04
TMEM88-201ENST00000301599 EFCAB6Q5THR3 1501 aa27.81■■■□□ 2.04
TMEM88-201ENST00000301599 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
TMEM88-201ENST00000301599 RPRD2Q5VT52 1461 aaKnown RBP27.79■■■□□ 2.04
TMEM88-201ENST00000301599 TOM1O60784 492 aa27.79■■■□□ 2.04
TMEM88-201ENST00000301599 PIK3C2BO00750 1634 aa27.78■■■□□ 2.04
TMEM88-201ENST00000301599 SYNMO15061 1565 aa27.74■■■□□ 2.03
TMEM88-201ENST00000301599 NUP155O75694 1391 aa27.73■■■□□ 2.03
TMEM88-201ENST00000301599 KDM5AP29375 1690 aaKnown RBP27.72■■■□□ 2.03
TMEM88-201ENST00000301599 HDGFP51858 240 aaKnown RBP27.71■■■□□ 2.03
TMEM88-201ENST00000301599 TET3O43151 1660 aa27.71■■■□□ 2.03
TMEM88-201ENST00000301599 UNC13BO14795 1591 aa27.7■■■□□ 2.03
TMEM88-201ENST00000301599 SCAF1Q9H7N4 1312 aaKnown RBP27.69■■■□□ 2.02
TMEM88-201ENST00000301599 PIP4K2BP78356 416 aa27.69■■■□□ 2.02
TMEM88-201ENST00000301599 RRBP1Q9P2E9 1410 aaKnown RBP27.68■■■□□ 2.02
TMEM88-201ENST00000301599 BCANQ96GW7 911 aa27.66■■■□□ 2.02
TMEM88-201ENST00000301599 ADGRB3O60242 1522 aa27.65■■■□□ 2.02
TMEM88-201ENST00000301599 LRRC7Q96NW7 1537 aa27.65■■■□□ 2.02
TMEM88-201ENST00000301599 CHGAP10645 457 aaKnown RBP27.64■■■□□ 2.02
TMEM88-201ENST00000301599 SLC26A8Q96RN1 970 aa27.64■■■□□ 2.02
TMEM88-201ENST00000301599 GCC2Q8IWJ2 1684 aa27.64■■■□□ 2.02
TMEM88-201ENST00000301599 IQGAP3Q86VI3 1631 aa27.61■■■□□ 2.01
TMEM88-201ENST00000301599 KCNA6P17658 529 aa27.61■■■□□ 2.01
TMEM88-201ENST00000301599 DISP3Q9P2K9 1392 aa27.6■■■□□ 2.01
TMEM88-201ENST00000301599 STRCP1A6NGW2 1772 aa27.6■■■□□ 2.01
TMEM88-201ENST00000301599 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMEM88-201ENST00000301599 PPP1R15AO75807 674 aaPredicted RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms